CA2525810A1 - Sensor platform using a horizontally oriented nanotube element - Google Patents

Abstract

Sensor platforms and methods of making them are described, and include platforms having horizontally oriented sensor elements comprising nanotubes or other nanostructures, such as nanowires. Under certain embodiments, a sensor element has an affinity for an analyte. Under certain embodiments, such a sensor element comprises one or more pristine nanotubes, and, under certain embodiments, it comprises derivatized or functionalized nanotubes. Under certain embodiments, a sensor is made by providing a support structure;
providing a collection of nanotubes on the structure; defining a pattern within the nanotube collection; removing part of the collection so that a patterned collection remains to form a sensor element; and providing circuitry to electrically sense the sensor's electrical characterization. Under certain embodiments, the sensor element comprises pre-derivatized or pre-functionalized nanotubes. Under certain embodiments, sensor material is derivatized or functionalized after provision on the structure or after patterning. Under certain embodiments, a large-scale array includes multiple sensors.

Description

Sensor Platform Using a Horizontally Oriented Nanotube Element Cross-Reference to Related Applications [0001] This application claims priority to and the benefit of the filing dates of the following:
Horizontally Oriented Sensor Constructed with Nanotube Technology (U.S.
Provisional Pat. Appl., Ser. No. 60/470,410), filed May 14, 2003;
Vertically Oriented Sensor Constructed with Nanotube Technology (U.S.
Provisional Pat. Appl., Ser. No. 60/470,371), filed May 14, 2003; and Resistance and Capacitance Modulation Structures Constructed with Nanotube Technology (U.S. Provisional Pat. Appl., Ser. No. 60/501,143), filed September 8, 2003.

[0002] The following are assigned to the assignee of this application, and are hereby incorporated by reference in their entirety:
Nanotube Films and Articles (U.S. Pat. Appl. Ser. No. 10/128,118), filed April 23, 2002;
Electromechanical Memory Array Using Nanotube Ribbons and Method for Making Same (U.S. Pat. Appl. Ser. No. 09/915,093), filed on July 25, 2001;
Electromechanical Three-Trace Junction Devices (U.S. Pat. Appl. Ser. No.
10/033,323), filed on December 28, 2001;
Methods of Making Carbon Nanotube Films, Layers, Fabrics, Ribbons, Elements and Articles (U.S. Pat. Appl. Sex. No. 10/341,005), filed on January 13, 2003;
Electro-Mechanical Switches and Memory Cells Using Vertically-Disposed Nanofabric Articles and Methods of Making the Same (U.S.
Provisional Pat. Appl., Ser. No. 60/446,786), filed on February 12, 2003;
Electro-Mechanical Switches and Memory Cells Using Horizontally-Disposed Nanofabric Articles and Methods of Making the Same (U.S.
Provisional Pat. Appl., Ser. No. 601446,783), filed on February 12, 2003;

Patterning of Nanoscopic Articles (U.S. Provisional Pat. Appl. Ser. No.
60/501,033), filed on September 8, 2003;
Patterning of Nanoscopic Articles (U.S. Provisional Pat. Appl. Ser. No.
60/503,099), filed on September 15, 2003;
Non-Volatile Electromechanical Field Effect Transistors and Methods of Forming Same (U.S. Provisional Pat. Appl. Ser. No. 60/476,976), filed on June 9, 2003; and Sensor Platform Using a Non-Horizontally Oriented Nanotube Element (U.S.
Pat. Appl., serial number not yet assigned), filed on May 12, 2004.
Background 1. Technical Field [0003] The present application relates generally to methods for the detection of target analytes and for measuring or detecting various electrical values by utilizing individual nanosensors and nanosensor arrays. The application relates more particularly to vehicles or platforms for creating such sensors and sensor arrays.
2. Discussion of Related Art [0004] Chemical sensors and biosensors have been utilized for detecting many species, from contaminants in air (e.g., in air quality sensors) to the presence of particular DNA segments in blood samples or other samples. More recently, chemical and biosensors utilizing nanotubes, such as single-walled carbon nanotubes (SWNTs) have been proposed. Such sensors take advantage of the smaller size and greater sensitivity of the sensor. See, e.g., J. Kong et al., Science, vol. 287, pp.
622-625 (Jan.
28, 2000).

[0005] Chemical sensors made of nanotubes may be functionalized or otherwise modified to become molecule-specific or species-specific sensors, see P. Qi et al., "Toward Large Arrays of Multiplex Functionalized Carbon Nanotube Sensors for Highly Sensitive and Selective Molecular Detection," Nano Lett., vol. 3, no.
3, pp.
347-51 (2003); Dai et al., "Carbon Nanotube Sensing," U.S. Patent Appl. Ser.
No.
10/175,026, filed on June 18, 2002. On the other hand, such sensors may comprise non-functionalized semiconducting tubes and may sense for the presence of known chemicals, see, e.g., Kong, sup~~a.

[0006] Because it is difficult to control the placement of individual nanotubes between electrodes, the reliable fabrication of nanoscale sensors using individual nanotubes is problematic. In addition, the nanotubes so used are singular.
Thus, devices using them may stop working if a single nanotube fails at a single point.

[0007] Therefore, though a body of art and literature exists and is evolving for the use of individual nanotubes in a sensor arrangement, a need exists for a more reliable vehicle or platform to serve as a sensor.
Summary [0008] The invention relates to sensor platforms and methods of making the same in which sensor platforms include sensor elements oriented substantially horizontally with respect to a major surface of a substrate (understood to be "horizontal") and having nanotubes or other nanostructures, such as nanowires, which, in various embodiments, may have or may be made to have an affinity for a corresponding analyte.

[0009] Under certain embodiments of the invention, a sensor platform includes a sensor element having a collection of nanostructures, such as nanotubes, nanowires, or a mixture thereof, and having an electrical characterization. A support structure supports the sensor element to receive a fluid, and control circuitry electrically senses the electrical characterization of the sensor element so that the presence of a corresponding analyte may be detected.

[0010] Under certain embodiments of the invention, a sensor element has an affinity for a corresponding analyte.

[0011] Under certain embodiments of the invention, the nanostructures used include nanotubes.

[0012] Under certain embodiments of the invention, the nanotubes are pristine nanotubes.

[0013] Under certain embodiments of the invention, nanotubes are derivatized to have or to increase the affinity.

[0014] Under certain embodiments of the invention, nanotubes are functionalized to have or to increase the affinity.

[0015] Under certain embodiments of the invention, the sensor element has an affinity for at least two analytes and the plurality of nanotubes includes at least two types of nanotubes, a first type of nanotube having an affinity for a first analyte and a second type of nanotube having an affinity for a second analyte.

[0016] Under certain embodiments of the invention, the support structure includes a channel and the sensor element is suspended to span the channel.

[0017] Under certain embodiments of the invention, the support structure includes a conductive electrode positioned in the channel, and the sensor element is deflectable in response to the control circuitry to contact the electrode so that a gating effect of the nanotubes in the sensor element may be electrically detected.

[0018] Under certain embodiments of the invention, an upper electrode is positioned above and separate from the sensor element.

[0019] Under certain embodiments of the invention, the sensor platform comprises a conductive element located apart from the sensor element so that the conductive element and the sensor element are in a capacitive relationship.

[0020] Under certain embodiments of the invention, the sensor platform comprises a first conductive element contacting the sensor element at a first point and a second conductive element contacting the sensor element at a second point, so that an electric current can run through the sensor element between the first and second conductive elements.

[0021] Under certain embodiments of the invention, a sensor element is substantially surrounded by support structure material so that it is not substantially exposed to potential contact with a fluid, and instead may, for example, act as, or as part of, a reference resistor or capacitor.

[0022] Under certain embodiments of the invention, a large-scale array of sensor platforms is provided in which the array includes a large plurality of sensor platform cells.

[0023] Under certain embodiments of the invention, a large-scale array of sensor platforms includes a plurality of sensor elements, each comprising a plurality of nanotubes.

[0024] Under certain embodiments of the invention, sensors may be made by providing a support structure comprising a substrate; providing a collection of nanostructures, such as nanotubes, nanowires, or a mixture thereof, on the substrate;
defining a pattern within the collection on the substrate, which pattern corresponds to a sensor element; removing part of the collection so that the patterned portion remains on the substrate to form a sensor element having a collection of nanostructures and having an electrical characterization; and providing control circuitry to electrically sense the electrical characterization of the sensor element so that the presence of a corresponding analyte may be detected.

[0025] Under certain embodiments of the invention, the collection of nanotubes is formed by growing the collection on the substrate using a catalyst.

[0026] Under certain embodiments of the invention, during the growing of the nanotube collection, the nanotubes are derivatized to have an affinity for a select analyte.

[0027] Under certain embodiments of the invention, during the growing of the nanotube collection, the nanotubes are functionalized to have an affinity for a select analyte.

[0028] Under certain embodiments of the invention, the nanotube collection is formed by depositing a solution of suspended nanotubes on the substrate.

[0029] Under certain embodiments ~f the invention, the sensor elements are made of pre-derivatized nanotubes.

[0030] Under certain embodiments of the invention, the sensor elements are made of pre-functionalized nanotubes.

[0031] Under certain embodiments of the invention, nanotubes are derivatized after being provided on the substrate.

[0032] Under certain embodiments of the invention, nanotubes are functionalized after being provided on the substrate.

[0033] Under certain embodiments of the invention, the patterned fabric remaining on the substrate is derivatized.

[0034] Under certain embodiments of the invention, the patterned fabric remaining on the substrate is functionalized.

[0035] Under certain embodiments of the invention, a conductive element is provided apart from the sensor element so that the conductive element and the sensor element are in a capacitive relationship.

[0036] Under certain embodiments of the invention, circuitry to measure a capacitance associated with the conductive element and the sensor element is provided.

[0037] Under certain embodiments of the invention, this circuitry comprises a reference capacitor.

[0038] Under certain embodiments of the invention, a reference capacitor is provided by capacitively associating a sensor element with a conductive element, but providing covering material so that the sensor element is not substantially exposed to potential contact with a fluid.

[0039] Under certain embodiments of the invention, a first conductive element and a second conductive element are provided such that the first conductive element contacts the sensor element at a first point and a second conductive element contacts the sensor element at a second point, so that an electric current can run through the sensor element between the first and second conductive elements.

[0040] Under certain embodiments of the invention, circuitry to measure the resistance between the first and second contacts to the sensor element is provided.

[0041] Under certain embodiments of the invention, this circuitry comprises a reference resistor.

[0042] Under certain embodiments of the invention, a reference resistor is provided by providing first and second conductive elements in contact with a sensor element at different points, but providing covering material so that the sensor element is not substantially exposed to potential contact with a fluid.

[0043] Under certain embodiments of the invention, nanowi~es or a collection of nanotubes and nanowires may take the place of nanotubes in other embodiments such as those described above.
Brief Descriptioyz of the Drawifzgs [0044] In the Drawings, Figure 1 is a scanning electron micrograph showing collections of substantially horizontally oriented, suspended nanotubes, arranged on a substantially horizontal wafer surface and suspended over channels between oxide bars.
Figures 2A-E illustrate nanotube fabric sensor devices according to certain embodiments of the invention;
Figures 3A-C illustrate nanotube fabric sensor devices according to certain embodiments of the invention;
Figures 4A-P illustrate acts of making vertical nanosensor devices according to certain embodiments of the invention;
Figure 5 illustrates a nanosensor device according to certain embodiments of the invention showing exemplary metallization schemes;
Figure 6 illustrates nanotube fabric sensor devices according to certain embodiments of the invention, illustrating locations of cross sections shown in subsequent figures;
Figures 7-9 illustrate cross sectional views of the nanotube sensor device of figure 6;
Figures 10 and 11 illustrate hybrid technology embodiments of the invention in which the nanosensor arrays use nanotube technology and standard addressing logic;
Figures 12(A)-(B) illustrate a nanotube fabric capacitor device according to certain embodiments of the invention;
Figures 13-15 illustrate NFET-PFET current mirror circuit diagrams according to certain embodiments of the invention;
Figures 16(A)-(B) illustrate a nanotube fabric resistor device according to certain embodiments of the invention;
Figures 17-19 illustrate NFET-PFET current mirror circuit diagrams according to certain embodiments of the invention;
Figures 20(A)-(B) and 21 illustrate framed or patterned sensing-fabric structures and methods to create them.
Figure 22 is a scanning electron micrograph of an array of contact holes, in each of which a sensor element could be located to form a large-scale array.
Detailed Description [0045] Preferred embodiments of the invention provide a new platform or vehicle to be used in sensors and sensor arrays for biological and/or chemical sensing. They can be built using conventional semiconductor fabrication techniques and can leverage existing manufacturing infrastructure and processes to create sensors employing carbon nanotubes. The manufacturing techniques are largely compatible with CMOS processes and can be conducted at lower temperatures than those for making prior-art nanotube sensing structures. They allow fabrication of a massive number of sensors on a given chip or wafer that can be integrated with various forms of control and computational circuitry.

[0046] As will be described in more detail below, preferred embodiments of the invention use elements made from a fabric of nanotubes ("nanofabrics"), rather than using individual nanotubes as was suggested in prior art. These elements may be derivatized or functionalized as is taught in the art for individual nanotubes. Unlike individual nanotubes, these nanofabric elements provide a degree of redundancy (e.g., the sensor will still work even if a given tube in the element is faulty), are more easily manufactured, and may be manufactured as parts of large arrays of sensors with complementary circuitry - for example, by locating sensor elements in each of a plurality of members of an array of contact holes like that pictured in Figure 2~.

[0047] The nanofabric elements may be either unmodified or functionalized so that they may be used to detect chemical analytes, such as organic and inorganic molecules. In certain embodiments, the chemical analyte may be a biological molecule such as peptides, proteins, or nucleic acids. The nanofabric may be functionalized, either non-covalently or covalently (e.g., by derivatization) so as to interact specifically with a particular analyte. The modified or unmodified analyte-sensitive nanofabrics may be incorporated into a nanosensor device for detection of the corresponding analyte in a sample. Preferred embodiments are understood to use the principle that charge transfer between SWNTs and adsorbed molecules changes the nanotube conductance, so as to provide novel nanosensor schemes. Preferred embodiments provide methods and compositions for the detection of target analytes using changes in the conductivity of nanotube fabric upon binding of the analytes.

[0048] Sensors according to preferred embodiments can be used in a way that allows detection and measurement of differences in their conductance or other electrical properties before and after the nanotubes are bound to analytes -e.g., by interacting non-covalently or covalently with a nanotube itself or with a complex consisting of a nanotube and a functionalization agent.

[0049] The change in the sensor's electrical properties may be measured in conjunction with a gating electrode, disposed below or adjacent to the nanotubes, via a field effect on the semiconducting nanotubes, see, e.g., P. Qi et al., "Toward Large Arrays of Multiplex Functionalized Carbon Nanotube Sensors for Highly Sensitive and Selective Molecular Detection," Nano Lett., vol. 3, no. 3, pp. 347-51 (2003).
When changes are detected in this way, it may be preferable to utilize a sensor with a suspended nanofabric structure.

[0050] The change in the sensor's electrical properties may also be measured via an electromechanical mechanism in which differences between switching voltage with respect to, current through, or resistance of a nanofabric element in relation to an underlying electrode is determined before and after the nanofabric is exposed to analytes. Further, the physical presence of the sensed molecules or species may result in detectable strain on the suspended nanofabric, thereby potentially allowing molecular weight of the material to be determined directly. For example, as the strain energy changes due to binding of sensed molecules, a corresponding change in voltage could be measured.

[0051] Nanosensors according to preferred embodiments are compatible with protocols that substantially prevent non-specific binding of non-target analytes. For an example of non-specific binding prevention, see Star et al., "Electronic Detection of Specific Protein Binding Using Nanotube FET Devices," Nano Lett., vol. 3, no. 4, pp. 459-63 (2003).

[0052] In certain embodiments, a nanofabric sensor may be used as an electrode in electrochemical sensors - for example, Clark-type sensors. See Lawrence et al., "A
Thin-Layer Amperometric Sensor for Hydrogen Sulfide: The Use of Microelectrodes To Achieve a Membrane-Independent Response for Clark-Type Sensors," Ahal.
Chem., vol. 75, no. 9, pp. 2053-59 (2003).
Exenzplary Architectural Sensor Platforms [0053] Figures 2(A)-(E) illustrate various embodiments of the invention. As will be described below, the sensor platforms may provide a vehicle in which a nanofabric element may be derivatized or functionalized after fabrication of the platform, but, in some embodiments, the derivatization or functionalization of the nanofabric element may be incorporated into the manufacturing steps of forming the sensor platform. In Figures 2(A)-(E), an individual sensor cell is shown, but, as will be clear from the description below, the utilization of well-known semiconductor manufacturing techniques allows these individual sensor cells to be replicated on a massive scale so that a given chip or wafer may have a very large number of sensors that may be essentially identical to one another. The cells may be organized into massive arrays, small groups, or individual entities. The description focuses on the architecture and basic platform. Subsequent sections discuss how the properties of the nanofabric element may be tailored in specific ways to achieve specific desired effects.

[0054] The nanofabric element 202 of certain embodiments is formed from a non-woven fabric or layer of matted nanotubes (described in more detail below, and also described in incorporated references). Under certain embodiments, the fabric is formed of single-walled carbon nanotubes (SWNTs), but other embodiments may utilize mufti-walled carbon nanotubes (MWNTs) or mixtures of single- and multi-walled carbon nanotubes or other nanoscopic elements, such as nanowires. The fabric of certain embodiments is substantially a monolayer of nanotubes with substantially constant porosity. This porosity may be substantially determined by, for example, the number and density of spin coats, which commonly also plays a principal role in substantially determining the capacitance of a particular nanofabric.

[0055] The sensing parameters of the nanofabric element resemble those of individual nanotubes. Thus, the predicted sensing times and switching voltages for the nanofabric element should approximate the corresponding times and voltages for individual nanotubes. Unlike prior art which relies on directed growth or chemical self assembly of individual nanotubes, preferred embodiments of the present invention utilize fabrication techniques involving thin films and lithography.
Such methods of fabrication lend themselves to generation of nanotubes and nanotube material over large surfaces, such as wafers 300mm in diameter. (In contrast, growing individual nanotubes over a distance beyond the sub-millimeter range is currently unfeasible.) The nanofabric element should exhibit improved fault tolerances over individual nanotubes, by providing redundancy of conduction pathways through nanofabric elements. (If an individual nanotube breaks, other tubes within the fabric can provide conductive paths, whereas, if a sole nanotube were used and broken, the associated nanosensing cell would be faulty.) Moreover, the resistances of nanofabric elements should be significantly lower than those for individual nanotubes, thus decreasing their impedance, since a nanofabric element may be made to have larger cross-sectional areas than individual nanotubes.

[0056] While typically a monolayer fabric of single-walled nanotubes may be desirable, for certain applications it may be desirable to have multilayer fabrics to increase current density or redundancy, or to exploit other mechanical or electrical characteristics of a multilayer fabric. Additionally, for certain applications it may be desirable to use either a monolayer fabric or a multilayer fabric comprising multi-walled nanotubes or comprising a mixture of single-walled and mufti-walled nanotubes.

[0057] A nanosensor crossbar junction may be formed by a crossing of nanotubes and an electrode. Appropriate application of voltages to such a system can result in deflection of the nanotubes toward or away from the electrode, and, in certain embodiments, can result in a bistable junction with a pair of "on" or "off' states -states in which the nanotubes are in stable positions of contact (e.g., electrical or physical) with the electrode or separation from the electrode, respectively.

[0058] Figure 2(A), for example, illustrates an exemplary platform (or sensor cell) 200 in cross-sectional view. Platform 200 includes a nanofabric element 202 that rests on or is pinned to supports 204 and 206. The element is suspended over an electrode 208 by a gap distance 210. In form, the structure of Figure 2(A) is thus like that of one of the various "crossings" shown in Figure 1, which shows a series of nanotube crossings of channels between oxide bars. Such patterned and suspended nanofabrics can be placed and manipulated using standard lithographic processing found in a CMOS fabrication facility and are compatible with requirements thereof, including low amounts of contamination by metallic or other matter, as is commonly demanded in high-throughput manufacturing.

[0059] Two states of the nanofabric element 202 in Figure 2(A) are shown with the perspective views of Figures 2(B)-(C). Figure 2(B), for example, shows the platform in an undeflected state, and Figure 2(C) shows the platform in a deflected state in which the nanofabric element has been caused to deflect into contact with electrode 208. Switching between the states is accomplished by the application, or removal, of specific voltages across the nanofabric element 202 and one or more of its associated electrodes 208. Switching forces are based, in part, on the interplay of electrostatic attraction and repulsion between the nanofabric article 202 and the electrode 208. Under certain circumstances, the second state of contact between nanofabric and electrode is "volatile": e.g., the nanofabric moves into contact with the electrode only when voltage is applied, and returns to its undeflected state when the voltage is removed. Under different circumstances, the state of contact is "nonvolatile": e.g., it may initially result from application of a voltage, but it continues after that voltage is removed.

[0060] Methods to increase adhesion energies between nanotubes and the electrode surface can be envisioned, and could involve the use of ionic, covalent, or other forces. These methods can be used to extend the range of bistability for nanotube-electrode junctions.

[0061] Upon successful completion of the sensing activity, it may be desirable to be able to reset a device in the field. In order to accomplish such a reset, it is possible that an electrical pulse able to cause removal of a sensed molecule from a nanosensor could be provided to clear or zero the state of the sensor. Necessary voltages could be determined for individual sensor types specifically or could be part of an overall reset pattern which might simultaneously clear all of the sensors from their states at a particular time. Such a reset feature would allow sensors to become saturated but then to be returned to their original state so that the device could be reused.
Reusability would reduce overall cost and maintenance requirements.

[0062] Under certain embodiments, the electrode 208 may be used as a reference or as a field generator involved in measurement. A "reference" electrode could be used to prevent false positive or false negative readings by creating a comparison between a "sense" cell and a non-binding cell.

[0063] Under certain embodiments, each cell may be read by applying currents andlor voltages to nanofabric articles 202 and/or the electrode 208. The electrical properties of the sensor may then be measured (measuring apparatus is not shown).
For example, the nanofabric element 202 may contact the underlying electrode and remain in contact, in a nonvolatile state. As a result, a change in the resistance or other electrical properties of the element 202, resulting from analyte binding - for example, a gating effect - may be detected. See P. Qi et al., "Toward Large Arrays of Multiplex Functionalized Carbon Nanotube Sensors for Highly Sensitive and Selective Molecular Detection," Narno Lett., vol. 3, no. 3, pp. 347-51 (2003).

[0064] In certain embodiments, the support structures 204 and 206 are made from silicon nitride (Si3N4) and are separated by about 180 nm. Meanwhile, the gap distance 210 is approximately 5-50 nm. Such a 5-50 nm gap distance is preferred for certain embodiments utilizing nanofabrics made from carbon nanotubes, and reflects the specific interplay between strain energy and adhesion energy for the deflected nanotubes. Gap distances of about 5-50 nm commonly create a platform in which a deflected state is retained in a nonvolatile manner, meaning the element 202 will stay deflected even if power is removed from the electrodes. Other gap distances may be preferable for other materials. Larger gap distances may be used to create volatile behavior, meaning that the deflected state will be lost when power is interrupted.

[0065] The electrode 208 may be made of any suitable electrically conductive material and may be arranged in any of a variety of suitable geometries.
Certain preferred embodiments utilize n-doped silicon to form such a conductive element, which can be, preferably, no wider than the nanofabric article 202, e.g., about 180 nm in width or less. Other embodiments utilize metal as conductor. In certain embodiments, the electrode 208 can be constructed from a nanofabric.

[0066] Likewise, the material of the support structures 204 and 206 may be made of a variety of materials and in various geometries, but certain preferred embodiments utilize insulating material, silicon nitride, or silicon oxide, and certain embodiments utilize electronic interconnects embedded within one support structure or both.

[0067] In certain embodiments, the nanofabric article 202 is held to the insulating support structures by friction. In other embodiments, the nanofabric article 202 may be held by other means, such as by anchoring the nanofabric to the support structures using any of a variety of techniques. Evaporated or spin-coated material such as metals, semiconductors or insulators especially silicon, titanium, silicon oxide, or polyimide can be added to increase the pinning strength. The friction interaction can be increased through the use of chemical interactions, including covalent bonding through the use of carbon compounds such as pyrenes or other chemically reactive species. See R.J. Chen et al., "Non-covalent Sidewall Functionalization of Single-Walled Carbon Nanotubes for Protein Immobilization," J. Am. Cla.ern. Soc., vol. 123, pp. 3838-39 (2001), and Dai et al., Appl. Phys. Lett., vol. 77, pp. 3015-17 (2000), for exemplary techniques for pinning and coating nanotubes by metals. See also WO
01/03208 for discussion of such techniques.

[0068] Specifically, for example, the nanofabric article 202 may be coupled to another material by introducing a matrix ~ material into the spaces between the nanotubes in a porous nanofabric to form a conducting composite junction, as described in the references incorporated above. Electrical and mechanical advantages may be obtained by using such composite junctions and connections. In one example, a conducting material is deposited onto the nanofabric and is allowed to penetrate into the spaces within the porous nanofabric, thus forming an improved electrical connection to the nanofabric and reducing the nanofabric article's contact resistance.
In another example, an insulating material is deposited onto the nanofabric and is allowed to penetrate into the spaces within the porous nanofabric, thus forming an improved mechanical pinning contact that increases strain when the article is bent or deflected.

[0069] Figure 2(C) illustrates a deflected nanofabric sensing switch according to one embodiment of the invention. The electrode or conductive trace 208 is disposed near enough to the suspended portion of the nanofabric element 202 that the two may contact one another when the nanofabric is deflected. The electrode 208 may also operate to create a field that can alter the electrical properties of a nearby nanofabric sensor; more particularly, the electrode 208 may create a field that alters the properties of semiconducting nanotubes in a nanosensor cell such as that of Figure 2(B). It is thus an object of certain embodiments of the invention to create a nanofabric sensor composed substantially or entirely of semiconducting nanotubes disposed adjacent to a field-emitting electrode. See P. Qi et al., "Toward Large Arrays of Multiplex Functionalized Carbon Nanotube Sensors for Highly Sensitive and Selective Molecular Detection," Nafzo Lett., vol. 3, no. 3, pp. 347-51 (2003).

[0070] Figure 2(D) illustrates another nanosensor cell 220. In this embodiment, the electrode 208 of platform 200 is replaced with a nonmetal material 222 disposed adjacent to the suspended portion of the nanotube fabric 202. Pinning structures 224, mentioned above, are shown explicitly in this case. Such pinning structures can allow facile electrical connection to the nanofabric as well as providing support or clamping of the nanofabric to the underlying surface 204. Pinning structures would be conductive in many applications, but can be insulating or conductive, depending on the application.

[0071] Figure 2(E) illustrates another nanosensor cell 226. In this embodiment, the nanofabric element 202 is not suspended and instead rests upon support material 230. Support material 230, which may also be characterized as a pinning structure, may be anything consistent with use as a sensor, including but not limited to metals, alloys, ceramics, semiconductors, plastics, glass, etc. Such a pinning structure can allow facile electrical connection to the nanofabric as well as providing support or clamping of the nanofabric to the underlying structure 204. A pinning structure would in many cases be conductive, but can be insulating or conductive, depending on the application.

[0072] Figures 3(A)-(C) illustrate another sensor cell and the states such a cell might achieve. In this cell, the nanofabric element 202 is positioned between a lower electrode 304 and upper electrode 306. The electrodes 304 and 306 (together with element 202) may be electrically stimulated to deflect the element 202 toward and away from electrode 304. For example, in some embodiments, the element 202 may be caused to deflect between the "at rest" state of Figure 3(A) and the deflected state of Figure 3(B). In certain embodiments, such a deflected state may be characterized as an "on" state in which the nanofabric-electrode junction is an electrically conducting, rectifying junction (e.g., Schottky or PN), which may be sensed as such through either the nanofabric article 202 or the electrode 304, when addressed. In certain embodiments, the element 202 may be caused to deflect toward electrode 306.
When this leads to a third state, as shown in structure 314 of Figure 3(C), the nanofabric article 202 is deflected toward electrode 306 generating an "on"
state different from the "on" state of the previous example (relevant electrical properties may be the same in both "on" states, but are addressed by different electrodes).

[0073] It should be recognized that figures such as Figures 3(A)-(C) are not drawn to scale, and the gap distances 210 in a given cell, for example, need not be equal. In other embodiments, the gap on one side of a nanofabric article 202 may be different from that on the other side, potentially allowing various combinations of volatile and nonvolatile switching behavior. Moreover, inclusion of a third trace in the form of a release node can add a capacity to use this third trace to reset the cell or to isolate a particular cell. For example, a voltage could be applied to a third trace to isolate a cell by causing a nanofabric article to be held in a particular nonvolatile state.

[0074] Furthermore, advantages in increased reliability and defect tolerance can come from the redundancy permitted by the presence of two conductive electrodes 304 and 306. Each of the two conductive electrodes may be separately used to apply forces to move an electromechanically responsive nanofabric element, and each of the two conductive electrodes may serve as the "contact" for one of two alternative "on"
states. Thus, the failure of one conductive trace may not be fatal to sensor junction performance. Among other things, the structures as shown in Figure 3 generally facilitate packaging and distribution, and allow nanotube-technology cells to be more easily incorporated into other circuits and systems such as hybrid circuits.
The nature of the electrical architecture can also facilitate the production of stackable sensor layers and the simplification of various interconnects.
Techniques For Tailoring Characteristz'cs Of Nanofabric Element [0075] Monolayer nanofabrics are made from single- or multi-walled nanotubes.
The electrical properties of nanofabrics are highly tunable depending upon concentration of nanotubes within a given fabric. These characteristics can be controlled. For example, by selecting the proper length and width of a nanotube fabric as well as its porosity, a specific resistance per square can be measured in a range from 1-1000 kOhm/o up to 1-10 megaOhm/o, depending on the type of device required and its necessary characteristics. Lower resistances may be achieved by shrinking the nanofabric dimensions and placing the nanofabric in contact with metal.
Certain devices where the concentration of sensors must be higher might require a lower resistance nanofabric.

[0076] A more sensitive device (e.g., one that uses fewer nanotubes in the nanofabric) would require fewer binding sites for specific analytes and could have a higher resistance. Many specific methods of preparing the nanofabric can be envisioned, depending upon the specific sensing requirements for a particular device.
Tuning methods of production, and the resulting products, to device requirements can be performed by using a combination of spin coating and photolithography in conjunction with functionalization or derivatization as described herein.

[0077] Nanofabrics may be created by chemical vapor deposition (CVD) or by applying prefabricated nanotubes onto a substrate (e.g., spin coating).
Various exemplary techniques are described in the incorporated and/or published patents and patent applications identified above.

[0078] In the event that CVD-grown nanotubes are to be utilized, derivitazation or functionalization of the fabric are straightforward. A CVD-grown nanofabric can be derivatized or functionalized in the same fashion as the spin-coated fabric.
Nanotubes grown by CVD can be doped during the growth process with a limited number of materials such as boron, silicon, indium, germanium, phosphorous, arsenic, oxygen, selenium, and other monatomic species using current technologies. After the CVD
process has been completed, CVD-grown nanotubes can be easily doped with an even wider variety of materials, including many types of molecules - for example, chemicals, drugs, DNA, RNA, peptides, or proteins.

[0079] The fabrication of nanofabrics by spin coating pre-formed nanotubes is described in the incorporated andlor published patents and patent applications identified above. Such an approach has advantages over fabrication of nanofabrics by CVD. For example, lower temperatures may be used for manufacture of the device.
This allows more materials to be used as a potential substrate in conjunction with the nanofabric element. In addition, prefabricated nanotubes may be derivatized or functionalized with nearly limitless agents before the nanotubes are applied to a substrate.

[0080] Other techniques for forming the nanofabric may be used as well - e.g., aerosol application, dipping, or any other appropriate method.

[0081] Nanofabric sensors may be comprised of semiconducting nanotubes, metallic nanotubes or both. Investigators have shown that metallic nanotubes may be separated from semiconducting nanotubes by precipitation. See, e.g., D.
Chattopadhyay et al., "A Route for Bulk Separation of Semiconducting from Metallic Single-Walled Carbon Nanotubes," .1. Amen. Chem. Soc., vol. 125, pp. 3370-75 (Feb.
22, 2003). It is therefore an aspect of certain embodiments of the present invention to create nanofabrics of controlled composition (semiconducting vs. metallic) using this or any other method of separation. According to one precipitation method, single-walled nanotubes are acid-treated and then functionalized non-covalently -e.g., in octadecylamine and tetrahydrofuran - causing metallic species to precipitate out of solution while leaving semiconducting nanotubes in solution. Either of the separate lots of nanotubes may be used for nanofabric creation once they are separated from one another. Separated nanotubes may be used to create nanofabrics for use as nanosensors with or without functionalization, and such nanotubes may be used in spin-coating applications and other appropriate methods as explained herein and in incorporated references. Furthermore, the relative concentrations of semiconducting and metallic nanotubes may be controlled. For example, one may create a fabric of approximately 90% semiconducting tubes and 10% metallic nanotubes by mixing a solution of 100% semiconducting nanotubes with a solution of unseparated nanotubes to acquire the desired concentration of each type of nanotube. Solutions of 100%
semiconducting tubes may be mixed with solutions of 100% metallic nanotubes as well.

[0082] Metallic nanotubes may also be destructively eliminated from already-formed nanofabrics by current-induced oxidation, see, e.g., P.G. Collins et al., "Engineering Carbon Nanotubes and Nanotube Circuits Using Electrical Breakdown,"
Scietace, vol. 292, pp. 706-09 (2001). It is an aspect of certain embodiments of the present invention to utilize the protocols set forth in this reference to create a nanofabric and to apply an appropriate voltage to it in order effectively to burn away metallic nanotubes. This method will work with nanofabrics that are created by CVD
or by any other process, such as spin coating, etc.

[0083] Once formed, the nanofabric can be patterned by using standard lithography techniques, as described in the incorporated and published patent references. Such lithography techniques allow patterning of nanofabric by permitting the controlled definition of a region of fabric for use as a sensor element -for example, in the form of a nanotube ribbon of substantially predetermined dimensions.
Exemplary Types Of Sensors That May Be Made Using The Sensor Platforms Of Preferred Embodiments [0084] A nanosensor can be composed of carbon nanotubes or other highly robust materials, including nanowires, that can operate under extreme conditions with no loss of sensitivity. Four general types of nanosensors have been envisioned:
~ pristine nanotubes (i.e., non-functionalized nanotubes) ~ non-covalently functionalized nanotubes ~ covalently derivatized nanotubes ~ a hybrid mixture of above.
1. Noh-Fuuctiosaalized, or Pristine, Najaotubes [0085] The first type of sensor utilizes pristine nanotubes in the nanofabric element - that is, the nanotubes are non-functionalized nanotubes. The surfaces of the nanotubes will adsorb analytes, which can alter electrical properties of the nanotubes, such as nanotube conductance or capacitance.

[0086] Under this approach, nanotubes may adsorb molecules or species onto their surfaces, resulting in a measurable change in electrical characteristics, such as a change in conductivity, resistance, capacitance, etc. The change in electrical characteristics) may be measured directly from the nanotubes themselves via an appropriate electrical contact.

[0087] Nanosensors can be used to detect concentrations of specific, known molecules. See L. Valentini et al., "Sensors for Sub-ppm N02 Gas Detection Based on Carbon Nanotube Thin Films," Appl. Phys. Lett., vol. 82, no. 6, pp. 961-63 (2003).
It is therefore an aspect of certain embodiments of the present invention to use nanofabric sensors to detect such concentrations.
2.-4. Functionalized Nanotubes [0088] Before nanotubes are applied to a surface to create a nanofabric, they can be functionalized in solution in order to increase the bonding of the tubes to a surface and/or to make possible the bonding of, or interaction with, analytes. It is therefore an object of certain embodiments of the present invention to functionalize individual nanotubes before they are used to create a nanofabric. It is a further object of certain embodiments of the present invention to use such functionalized nanotubes to create nanosensors, especially by patterning the nanofabric into specific shapes.

[0089] Nanotubes may be functionalized in suspension before they are used to create a nanofabric, and such functionalized tubes may be stored in bulk before use.
Such bulk-functionalized nanotubes may be mixed with pristine nanotubes to generate a partially functionalized nanofabric. More than one variety of functionalized nanotube solutions may be combined to generate mixtures of nanotubes to make mixed-functionalized nanofabrics. This procedure can be repeated to generate nanofabrics having as many different species of functionalized nanotubes as is desired for sensing. Thus, one could, for example, functionalize a nanotube solution with DNA sequences to sense from a test sample just particular species of interest, such as those associated only with a specific virus or solely with specific forms of cancer. An aspect of some embodiments of the present invention is the use of nanosensors in the detection of specific antigens or major histocompatibility complex (MHC)/antigen complexes from mixtures of fluids to be tested as an early warning sensor of disease or infection.

[0090] In another embodiment, nanotubes may be functionalized after nanotubes have been applied to a substrate in order to create a nanofabric. In this case, solution or gas phase functionalization could proceed before or after patterning the nanofabrics. This technique would lend itself to multiple spatially-addressable functionalization events across a surface. For example, one could envision using an inkjet-like process to spray various types of functionalizing agents onto specific regions of a substrate. Subsequent steps could be used to apply additional functional groups in the same or different regions to make nanosensor devices with regionally tailored sensing agents on the same substrate. In this way, many different types of analytes could be sensed by a given array, potentially with each cell sensing for the presence of a different analyte.

[0091] In yet another embodiment, nanotubes may be functionalized after sensing regions are patterned out of the bulk nanofabric. (See U.S. Pat. Appl. Ser.
Nos.
10/341,005, 10/341,055, 10/341,054 and 10/341,130 for exemplary details on creating and patterning fabrics.) Upon completion of patterning, individual regions can be functionalized to serve as specific sensors. Multiple serial functionalizations or mixtures of functionalizing agents can be used to generate hybrid sensors capable of sensing more than one analyte at a time on a patterned nanofabric section or many such sections. This property lends itself to automation and use with robotics.

[0092] Suitable analytes include organic and inorganic molecules, including biomolecules. In a preferred embodiment, the target analyte may be ~ any environmental pollutant(s), including pesticides, insecticides, toxins, etc.;
~ a chemical or chemicals, including solvents, polymers, organic materials, etc.;

~ one or more types of therapeutic molecules, including therapeutic and abused drugs, antibiotics, etc.;
~ one or more types of biomolecules, including hormones, cytokines, proteins, lipids, carbohydrates, cellular membrane antigens and receptors (neural, hormonal, nutrient, and cell surface receptors) or their ligands, etc;
~ whole cells, including prokaryotic (such as pathogenic bacteria) and eukaryotic cells, including mammalian tumor cells;
~ viruses, including retroviruses, herpes viruses, adenoviruses, lentiviruses, etc.; and ~ spores; etc.
[0093] For example, potential analyte molecules include nucleic acids, oligonucleotides, nucleosides, and their grammatical equivalents, as well as any and all modifications and analogs thereof, as understood in the art - including, for example, amino- or thio-modified nucleosides, and nucleotide molecules with alternate backbones or containing one or more carboxylic sugars, see, e.g., Beaucage et al., Tetraheelroh, vol. 49, no. 10, p. 1925 (1993); Jenkins et al., Chern.
Soe. Rev., pp. 169-176 (1995). Hence, quite generally, molecules having at least two nucleotides covalently linked together could be potential analytes. Further, the category of potential analytes encompasses both single-stranded and double-stranded nucleic acids, as well as nucleic acids containing portions of both double-stranded and single-stranded sequences. Similarly, a potential nucleic-acid analyte could be DNA
(including genomic or cDNA), RNA, or a hybrid, where the nucleic acid contains any combination of deoxyribo- and ribo-nucleotides, and any combination of bases, including uracil, adenine, thymine, cytosine, guanine, inosine, xathanine, hypoxathanine, etc. Mimetic compounds for any of the above might also act as potential analytes. In like fashion, potential analytes include proteins, oligopeptides, peptides, and their analogs, including proteins containing non-naturally occurring amino acids and amino-acid analogs, and peptidomimetic structures.

[0094] One skilled in the art will understand that a large number of analytes may be detected using various embodiments of the present invention. Any target analyte for which a binding ligand, described herein, may be made may be detected using the methods and articles of various embodiments of the invention.

[0095] Nanoimprint lithography may be used as a method of applying functionalization agents to discrete portions of nanofabric and thus to create discrete nanosensors. Such a method is primarily used for making massive arrays with sub-100 nm features. Inkjet printing technology may be used for applying functionalization agents to discrete portions of a nanofabric to create separate nanosensors on a given wafer. Inkjet printing can be used to automate the functionalization of discrete nanosensor cells, either by applying functionalization agent to nanofabric cells directly, or by applying functionalized nanotubes to the area where a cell would reside on a substrate. Inkjet printing is a non-impact, dot-matrix printing technology in which droplets of ink or, in this case, nanotube solutions are "jetted" from a small aperture directly to a specified position on a surface or medium to create an image.

[0096] Investigators have described a way of immobilizing proteins at specific locations on nanotubes. See I. Banerjee et al., "Location-Specific Biological Functionalization on Nanotubes: Attachment to Proteins at the Ends of Nanotubes Using Au Nanocrystal Masks," Nano Lett., vol. 3, no. 3, pp. 283-287 (2003).
Certain embodiments of the present invention utilize the teachings of Banerjee in that, according to them, nanosensors can be made using proteins immobilized at the ends of nanotubes to sense for complementary species. According to this method, nanocrystals of gold are applied to the sidewalls of nanotubes, and avidin is adsorbed onto the entire surfaces of the nanotubes. A chemical etch procedure is performed to remove the gold nanocrystals and therefore also remove the avidin overlying the gold nanocrystals, leaving only the avidin attached to the ends of the nanotubes.
It is therefore an aspect of certain embodiments of the present invention to fabricate nanosensors using this procedure and to immobilize protein at the ends of nanotubes used in nanosensing cells, articles, and elements.

[0097] The sensors should be exposed to analytes, either as a part of a fully or nearly fully exposed system or as part of an encapsulated system whereby analytes are introduced in a controlled way. For example, the nanofabric of a gas sensor may be fully exposed to the air, whereas the nanofabric of a DNA sensor might be encapsulated within a complex microfluidic analyte introduction mechanism.
With regard to the latter, see PCT publication WO 00/62931, "The Use of Microfluidic systems in the Electrochemical Detection of Target Analytes." In this PCT
document, the inventors describe a sensor system whereby a fluid containing analytes is introduced to a sensing chamber by way of microchannels. Optional storage chambers and cell lysing chambers may be connected to the system by way of other microchannels. It is an object of certain embodiments of the present invention to utilize nanofabric sensors in such microfluidic systems.

[0098] Another such microfluidic analyte delivery system is described in U.S.
Pat.
No. 6,290,839 to Kayyem, wherein a detection surface comprises a detection electrode having a monolayer of conductive oligomers, and optionally a capture binding ligand capable of binding the target analyte. The target analyte directly or indirectly binds to the capture binding ligand to form a binding complex. The binding complex further comprises at least one electron transfer moiety. The presence of the electron transfer moiety is detected using the detection electrode. It is therefore an object of certain embodiments of the present invention to use the nanofabric sensor as the sensing element in the device according to the '839 patent to Kayyem.

[0099] The nanosensor according to certain embodiments of the present invention may also be used as a detector according to the principles disclosed in U.S.
Pat. No.
6,361,958 to Sheih. Sheih relates to a microfluidic device with microchannels that have separated regions that have a member of a specific binding pair member such as DNA or RNA bound to porous polymer beads or structures fabricated into the microchannel. The microchannels may be fabricated from plastic and are operatively associated with a fluid-propelling component and detector. It is therefore an aspect of certain embodiments of the present invention to incorporate a nanosensing fabric into the system of the '958 patent to Sheih.

[0100] The nanosensors according to certain embodiments of the present invention may also be used for analyte delivery and detection in conjunction with the nanofluidic channels described in incorporated references.
Non-Covalent Functionalization [0101] The second type of sensor utilizes a nanofabric element in which nanotube surfaces are non-covalently functionalized. This allows for interaction with a wide variety of cations, anions, metal ions, small molecules, DNA, and proteins.

[0102] Non-covalent functionalization takes advantage of non-covalent bonding of molecules to the sidewalls of nanotubes with substantial retention of the chemical structure and electrical characteristics of the nanotubes. Nanosensing devices can take advantage of such functionalization of nanotubes to increase, or make possible, bonding of nanotubes to analyte molecules or atoms. Nanofabrics may be non-covalently functionalized by adding pyrenes or other chemicals that are known to bind to nanotubes or graphite. For example, 1-pyrenebutanoic acid and succinimidyl ester in organic solvent, such as dimethylformamide or methanol, can be used to generate a succinimydyl functionalized nanotube. This method takes advantage of the pyrenyl group's interaction with the sidewalk of the nanotubes while generating succinyl ester groups that are highly reactive with nucleophilic substitution by primary and secondary amines found on the surfaces of most proteins and peptides as well as many drug and pro-drug compounds - where a "pro-drug" is, for example, an inactive precursor of a drug that is converted into active form in the body by normal metabolic processes. This functionalization mechanism is used to immobilize proteins and a wide variety of other biomolecules onto the sidewalls of SWNTs and to sense specifically for molecules that conjugate or bind those immobilized molecules preferentially. For example, streptavidin may be adsorbed onto a nanotube surface in order to be used in immunohistochemical sensing. See Chen et al., "Non-covalent Sidewall Functionalization of Single walled Carbon Nanotubes for Protein Immobilization," J. Arrz. Chem. Soc., vol. 123, pp. 3838-39 (2001). The use of such nanosensors is compatible with analyte detection systems where non-specific binding is prevented. See, e.g., Star et al., "Electronic Detection of Specific Protein Binding Using Nanotube FET Devices", Narro Lett., vol. 3, no. 4, pp. 459-63 (2003).

[0103] Many methods are known for non-covalently functionalizing nanotubes.
See, e.g., J. Kong et al., "Nanotube Molecular Wires as Chemical Sensors,"
Science, vol. 287, pp. 622-25 (Jan. 28, 2000); U.S. Patent No. 6,528,020; and U.S. Pat.
Appl.
No. 2002/0172963 to Kelley et al., "DNA-Bridged Carbon Nanotube Arrays." For example, coating of a nanotube with PMMA (polymethylmethacrylate) has been shown to sensitize the nanotube to N02 gas, and gold decoration of a nanotube has been shown to sensitize it to the presence of a thiol vapor, see U.S. Patent No.
6,528,020. In fact, since nanotubes retain similar properties to graphitic sheets, nearly any method suitable for non-covalently functionalizing graphite may be used to functionalize nanotubes.
3. Covalent Furactionalization [0104] The third type of sensor utilizes a nanofabric element in which a covalently derivatized nanotube surface allows any of the interactions above.

[0105] Nanotubes have been functionalized using covalent chemical bonding methods - e.g., involving diazonium salts. See J.L. Bahr et al., "Functionalization of Carbon Nanotubes by Electrochemical Reduction of Aryl Diazonium Salts: A Bucky Paper Electrode," J. Am. Chef~z. Soc., vol. 123, no. 27, pp. 6536-42 (2001);
J.L. Bahr et al., "Highly Functionalized Carbon Nanotubes Using in Situ Generated Diazonium Compounds," Chem. Mater., vol. 13, no. 11, pp. 3823-24 (2001). Other workers have used solvent-free methods such as aniline in isoamyl nitrate. See, e.g., C.A.
Dyke et al., "Solvent-Free Functionalization of Carbon Nanotubes," J. Am. Chem. Soc., vol.
125, no.5, pp. 1156-57 (2003). Still others have used oxidative processes to functionalize nanotubes in one-pot reactions, in which reactions occur in a single reaction vessel. See, e.g., M.G.C. Kahn et al., "Solubilization of Oxidized Single-Walled Carbon Nanotubes in Organic and Aqueous Solvents through Organic Derivatization," Naho Lett., vol. 2, no. 11, pp. 1215-18 (2002). Yet others have covalently bound peptide nucleic acid sequences to single-walled carbon nanotubes.
See, e.g., K.A. Williams et al., "Carbon nanotubes with DNA Recognition,"
Nature, vol. 420, p. 761 (2002).

[0106] For example, Williams et al., supra, uses an approach to providing covalently functionalized nanotube nanofabrics in which the unique properties of a nanofabric are combined with the specific molecular-recognition features of DNA by coupling a nanofabric to peptide nucleic acid (PNA, an uncharged DNA analog) and hybridizing these macromolecular wires with complementary DNA. This allows the incorporating of DNA-derivatized nanofabrics into larger electronic devices by recognition-based assembly, and allows using nanofabrics as probes in biological systems by sequence-specific attachment. The technique used to couple nanofabrics covalently to PNA involves ultrasonically shortening nanofabric ropes for 1 hour in a 3:1 mixture of concentrated HZS04 and HN03. Subsequent exposure to 1 M HCl produces abundant carboxyl end-groups. This material is then dispersed in dimethylformamide (DMF, 99.5%) and incubated for 30 min in 2 mM 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide hydrochloride and 5 mM N-hydroxysuccinimide (NHS) to form nanofabric-bearing NHS esters. PNA adducts are then formed by reacting this material in DMF for 1 hour with excess PNA (sequence: NH2-Glu-GTGCTCATGGTG-CONH2, where Glu is a glutamate amino-acid residue and the central block represents nucleic-acid bases). The PNA-derivatized nanofabric is transferred to water and dispersed in 0.5% aqueous sodium dodecyl sulphate. To examine DNA hybridization to this modified nanofabric, fragments of double-stranded DNA with 12-base-pair, single-stranded "sticky" ends that were complementary to the PNA sequence were used. These fragments were produced by cutting double-stranded DNA with restriction enzymes and ligating the products to single-stranded oligonucleotides. This sticky DNA was hybridized to the PNA-nanofabric in water, deposited on freshly cleaved mica with 5 mM MgCl2. The surface was rinsed and dried. Atomic-force micrographs of the DNA/PNA-nanofabric hybrids may then be recorded. The antisense properties of this derivatized complex may be exploited in biological applications, for example in biosensors.

[0107] These methods allow appreciable and measurable functionalization of nanotubes with specific moieties or sensing agents added directly through covalent bonding. In effect, the functionalized nanotube becomes a reactive chemical itself and further chemistry can be performed to yield such diverse species as nanotubes with nanocrystals and inorganic compounds. See, e.g., S. Banerjee et al., "Functionalization of Carbon Nanotubes with a Metal-Containing Molecular Complex," Na~eo Lett., vol. 2, no. 1, pp. 49-53 (2002); S. Banerjee et al., "Synthesis and Characterization of Carbon Nanotube-Nanocrystal Heterostructures," Nazzo Lett., vol. 2, no. 3, pp. 195-200 (2002); S. Banerjee et al., "Structural Characterization, Optical Properties, and Improved Solubility of Carbon Nanotubes Functionalized with Wilkinson's Catalyst," J. Am. C'hezzz. Soc., vol. 124, no. 30, pp. 8490-48 (2002).
These functionalized-nanotube building blocks can be modified using the wealth of available chemistries to decorate them with groups and moieties necessary to sense nearly any chemical or biological agent desired.
[010] As is the case with non-covalently functionalized, covalently functionalized nanotubes may be used in three ways to create nanosensors. The nanotubes may be functionalized separately and applied to a substrate, for example, by using a spin coating method or other method of application. In another embodiment, the nanofabric may be applied to a substrate and subsequently covalently functionalized before patterning. In yet another embodiment, the nanofabric may be functionalized after creation and patterning of the nanofabric.

Each of these three methods lends itself to creation of a nanofabric comprising one or more types of functionalized nanotubes in the presence or absence of pristine nanotubes, depending upon the sensor application desired. Upon successful generation of a source of nanotubes containing the proper set of functional moieties, a nanosensor can be fabricated using various methods.
4. Hybrid [0109] The fourth type of sensor uses a mixture of two or three of the previous types. By using such a mixture, a hybrid nanosensor is created with multiple binding-site types potentially able to detect multiple analytes and analyte types.
Many different possible compositions of surface-functionalized nanotubes can be created before nanotubes are applied to the substrate, thereby allowing for a mixture of sensing components which can simultaneously screen for discrete analytes.
Methods of making exemplary embodiments [0110] Figures 4(A)-(P) collectively illustrate various intermediate structures created during an exemplary method of creating exemplary nanosensors like those of Figure 3(A) or, with some modification (see, for example, discussion of Figure 4(N') below), Figure 2(D).
[0111] A silicon wafer substrate 400 with an insulating or oxide layer 402 is provided. Alternatively, the substrate may be made from any material suitable for use with lithographic etching and electronics, and the oxide layer can be any suitable insulator. The oxide layer 402 has a top surface 404. The oxide layer 402 is preferably a few nanometers in thickness, but could be as much as 1 ~m thick.
Oxide layer 402 is patterned and etched to generate a cavity 406 and to form supports 410, thereby forming intermediate structure 408 of Figure 4(A).
[0112] With modern techniques, the width of cavity 406 may be as narrow as about 20 nm, or even smaller, depending upon the type of lithographic patterning available. However, the cavity can be wider or narrower, depending on the application and manufacturing method used. The remaining oxide material defines supports 410 on either side of cavity 406. A lower electrode 412 is deposited in the cavity 406. The electrode material can be chosen from any suitable conductor or semiconductor. If necessary, the lower electrode 412 is planarized such that its top surface is substantially level with top surface 404, forming intermediate structure 414 of Figure 4(B). Alternatively, lower electrode 412 can be a prefabricated contact plug or a via. Also, lower electrode 412 can be deposited or fabricated in other ways, including formation on the surface of substrate 400.
[0113] A nitride layer 416 (or any suitable insulator) is deposited on the surface of intermediate structure 414, forming intermediate structure 418 of Figure 4(C).
The nitride layer 416 has a top surface 420. A non-limiting example of nitride thickness is approximately 20 nm for 0.18 micron ground rule (GR). The nitride thickness may vary depending on the ground rule of the desired final product. These dimensions can affect whether the switch is nonvolatile or volatile and can also affect the Vo" and Voff voltages.
[0114] Nitride layer 416 is then patterned and etched to generate cavities corresponding in size and shape to nanotube active region 422, located substantially above lower electrode 412. Remaining nitride layer 424 is left in the area around such a cavity, thus forming intermediate structure 426 of Figure 4(D).
[0115] Sacrificial layer 428 is deposited on the surface of intermediate structure 426, forming intermediate structure 430 of Figure 4(E). A non-limiting example of the material from which sacrificial layer 428 can be made is polysilicon.
However, any appropriate material selectively etchable (when necessary) over other materials of certain embodiments of the present invention can be used. A non-limiting parameter for the thickness of sacrificial layer 428 is that it be on the order of 100 to 200 nm.
[0116] The top surface of intermediate structure 430 is planarized such that the surface of the remaining polysilicon layer 432 is substantially level with the top surface of remaining nitride layer 424, thus forming intermediate structure 434 of Figure 4(F).
[0117] A nanotube fabric 436 is applied to, or formed on, the surface of intermediate structure 434, thus forming intermediate structure 438 of Figure 4(G).
Non-limiting methods of applying such a fabric are spin coating, aerosol application, dipping, or chemical vapor deposition as described in the references listed and incorporated above.
[0118] Resist layer 440 is applied to the surface of intermediate structure 438, forming intermediate structure 442 of Figure 4(H).

[0119] As indicated in Figure 4(I), a nanotube fabric region 447 (indicated by dashed lines) larger than the nanotube active region 422 (see Figure 4(D)) is patterned by first lithographically patterning resist layer 440, forming intermediate structure 444 with exposed nanofabric portions 446 and patterned resist layer 448.
Exposed nanotube fabric 446 is then removed, forming intermediate structure 450 of Figure 4(J). A non-limiting method of patterning the nanotube fabric is by plasma ashing.
[0120] Patterned resist layer 448 is removed using any appropriate method, such as stripping, forming intermediate structure 452 of Figure 4(K). Structure 452 has patterned nanotube fabric 454, corresponding essentially to nanotube fabric region 447 in Figure 4(I).
[0121] Polysilicon layer 456 is deposited over the surface of intermediate structure 452 to form intermediate structure 458 of Figure 4(L). A non-limiting range for the thickness of polysilicon layer 456 is between about 20 to 50 nm.
Polysilicon layer 456 is patterned, for example, by etching to form intermediate structure 462 of Figure 4(M), which has remaining polysilicon layer portion 460 over nanotube active region 422. Remaining polysilicon layer portion 460 is larger than nanotube active region 422 and is the same size or larger than the underlying patterned nanotube fabric 454.
[0122] An alternative way to go from structure 442, of Figure 4(H) to structure 462 of Figure 4(M) involves the steps indicated by Figures 4(I'), 4(J'), and 4(M).
According to this alternative procedure, nanotube fabric is patterned by first lithographically patterning resist layer 440 to form intermediate structure 445 of Figure 4(I'), leaving remaining resist layer 449 while exposing nanotube fabric portion 447. A polysilicon layer 457 is deposited over exposed nanotube portion 447 and remaining photoresist layer 449, forming intermediate structure 451 of Figure 4(J'). Remaining photoresist layer 449 is then removed in a liftoff process, leaving polysilicon layer 457 over nanotube active region 422. The exposed nanotube fabric is removed - e.g., by ashing (not shown), as was illustrated in Figures 4(I)-(J) -leaving intermediate structure 462 of Figure 4(M).
[0123] If a tri-state or tri-trace device is not desired, then the next step is outlined in Figure 4(N') and described below.

[0124] If a tri-state or tri-trace device is desired, then top electrode material 464 is deposited over the top surface of intermediate structure 462, forming intermediate structure 466 of Figure 4(N). A non-limiting thickness of electrode material 464 is on the order of about 350 nm. The type of substance for electrode material 464 can be selected from any metal or conductor suitable for electronic components.
Depending on the ultimate use of the device fabricated, this material could be an insulator, e.g., if it were to be used as a nanosensor protective layer. The top "electrode" could also be defined as a line or a slot landing pad or other structure suitable for interconnection.
[0125] Top electrode material 464 is patterned to form electrode 468 of intermediate structure 470 of Figure 4(O) - for example, to form a second electrode for use in a tri-stable sensor device. Remaining polysilicon layer portion 460 and remaining polysilicon 432 are etched away to create intermediate structure 476 of Figure 4(P). Intermediate structure 476 has suspended nanotube fabric 472 and air gap 474 in the location that was occupied by remaining polysilicon layer portion 460.
Structures that provide this air gap while also providing support for second electrode 468 are further illustrated in diagrams such as Figures 5 and 6.
[0126] A sensor can be created without a top electrode. Intermediate structure 4(M) is created or provided, and remaining polysilicon layer portion 460 and remaining polysilicon 432 are etched away as indicated in Figure 4(N'), which shows a suspended nanosensor made from suspended nanotube fabric 472. If desired, and as indicated in Figure 4(N' ), patterned nanotube fabric may be attached to supports by pinning structures 482, thereby forming structure 480. Pinning of nanofabric articles is described in more detail elsewhere herein and in the incorporated references.
[0127] Structures such as those produced by the above methods may serve as a basis for a pair of bi-state or tri-state switching sensors, as is explained below. (Bi-state cells may be fabricated with the same elements as tri-state cells - for example, by making the gap distance between the nanofabric and one electrode great enough to prevent nonvolatile contact between the two, but close enough so that the electrode-nanofabric interaction may be used to switch "off ' an oppositely disposed nonvolatile sensor cell.) The behavior of the switching devices is influenced by the strain in the suspended nanofabric portions and the surrounding gap distances, as discussed herein.
[0128] In these and other embodiments, the nature of the resulting devices and switches depends on the construction and arrangement of the electrodes and connections, among other factors. Attention is called to the construction of various types of electrodes in the following embodiments, as an indication of the flexibility of these devices and the variety of their potential uses. For example, some devices share common electrodes between more than one nanofabric article (e.g., two nanofabric switch elements being influenced by a same shared electrode). Other devices have separate electrodes that each influence the behavior of the nanofabric. One or more electrodes can be used with each nanofabric article to control the article, as mentioned in the incorporated reference entitled "Electromechanical Three-Trace Junction Devices."
[0129] Figures 5 illustrates a metallization scheme that can be made from structure 476 of Figure 4(P). The nanosensor in structure 476 has been encased (at least in part) by insulating material 510, and has a gap height 520, forming structure 500. In some embodiments, the gap height 520 is a function of the thickness of, for example, sacrificial polysilicon layer 432. See Figure 4(O) above. Upon deflection, the nanofabric may contact the lower electrode 412, forming a stable junction based on a van der Waals interaction and thereby yielding a nonvolatile switch.
[0130] Figure 6 illustrates a plan view of intermediate structure 476 of Figure 4(P). An oxide layer supports a nanofabric 472 and nitride layers 616 support electrode 468. The locations of cross sections A-A', B-B' and C-C' are shown for reference.
[0131] Figure 7 is a perspective view of intermediate structure 476 at cross-section A-A', and Figures 8-9 are perspective views of a suspended-nanosensor structure 800 like intermediate structure 500 of Figure 5 at cross sections B-B' and C-C', respectively, as indicated in Figure 6 (structure 476 is like structure 500 but with the top insulating layers removed for clarity). In Figure 8(A), a substrate layer 400 supports an oxide layer 402. A lower electrode 412 is disposed below and not in contact with nanofabric 472, which is fixed to insulating layer 424.
Insulating layers 616 and 510 support electrode material 468.
[0132] Likewise, Figure 9 illustrates a view of a suspended nanosensor according to an embodiment of the invention. The nanofabric 472 in this cross section does not appear to be contacting any other element, but, as can be seen in figure 5, the nanofabric does contact other elements that axe simply not shown - e.g., insulating layer 424 (not shown in figure 9). The exploded view (indicated by the dashed lines) illustrates the interrelations of substrate 400, insulating layer 402, insulating layer 424, and electrodes 412 and 468, as well as the location of nanofabric 472 in reference to the aforementioned elements.
[0133] Further details regarding one exemplary embodiment of a method for providing a nanofabric region in contact with electrodes necessary for measurements - for example, a sensor such as that of nanofabric region 472 in structure 480 of Figure (N'), in an application where the pinning structures 482 act as electrode contacts - may be described as follows. The structure shown is generated, in part, by using two standard photomasks to pattern gold contacts to the nanofabric line, which, for example, has dimensions of about 6 ~.m in length and 2 ~.m in width. The nanofabric contains pristine single-walled carbon nanotubes is treated with a mixture of 10 wt% polyethyleneglycol (PEG) with an average molecular weight of 25,000 and wt% polyethyleneimine with an average molecular weight of 10,000 in water at room temperature overnight. The actual concentrations and amount of time required for this step can vary depending upon the size and density of the nanofabric required for the device. Also, it is noted that the nanotubes are exposed directly to solvent and must be handled with care in order to prevent damage to the nanofabric. For this purpose, air drying rather than nitrogen blowing was performed. The nanotube fabrics could be allowed to dry in an oven with or without oxygen. After thorough rinsing in water, the nanofabric was subjected to a 15 mM solution of biotin-N-hydroxysuccinimide ester at room temperature overnight. After derivatizing of the free amine groups on the nanofabric overnight, the polymer-coated and biotinylated nanofabric can be tested for sensing capabilities by subjecting it to a 2.5 ~,M solution of streptavidin in 0.01 M phosphate buffered saline (pH 7.4) at room temperature.
This test can be performed while electrical contacts are attached as long as the measurement voltage is sufficiently low. The electrical characteristics of the "pretested" (no streptavidin added) nanofabric are compared with those of the streptavidin-bound nanofabric to delineate a binding event.
[0134] The total concentration of binding moieties can be determined by using streptavidin that is bound with gold particles. The particles for a given area of nanofabric can be counted by SEM or AFM to determine the order of magnitude sensitivity available within a particular device. Since such derivatization can take place over an entire wafer, it is easy to generate nanofabric sensors with a very narrow range of characteristic binding concentrations (over 4 orders of magnitude or more).
[0135] The methods of fabrication for the nanotube sensors of various embodiments of the present invention do not require the use of substrates that can withstand CVD temperatures. However, such substrates may also be used. Sensors of preferred embodiments are typically composed of nanotube fabrics that comprise redundant conducting nanotubes; these fabrics may be created via CVD, or by room-temperature operations as described herein and in incorporated references. In such a redundant sensor, if one sensing nanotube breaks, the device would remain operable because of the redundant conductive elements in each sensor. Because the nanosensor described herein can be fabricated at room temperature, the use of nearly any substrate, including highly flexible materials and plastics is possible.
[0136] Nanosensors according to certain embodiments of the present invention can be readily easily manufactured using standard techniques found in the semiconductor industry such as spin coating and photolithography. The feature size of each nanosensor can be determined by photolithography or by deposition.
Because such standard techniques are used in the construction of the nanosensors, the overall cost, yield, and array size can be larger than sensors created by other known techniques. Nanosensor cells according to certain embodiments of the present invention can be used in massive parallel arrays and can be multiplexed using standard CMOS-compatible sense amplifiers and control logic.
[0137] Nanosensors according to preferred embodiments of the present invention are compatible with high-resolution contact printing methods. See H. Li. et al., "High-resolution Printing with Dendrimers," Naho Lett., vol. 2, no. 4, pp. 347-(2002). Patterned nanofabrics may be created on a substrate (as described below and in incorporated references), and those patterned nanotubes may be transferred via an appropriate contact printing method to a second substrate. Parameters such as solubility and binding affinity are important factors to be considered in selecting suitable substrates. Alternatively, functionalized, patterned nanotubes may be transferred in the same manner. And still another alternative that utilizes contract printing technology is the application of patterns of functionalization agent to specific, defined regions on patterned nanofabric - e.g., on different nanofabric sensor Bells.

[0138] The inventors contemplate that standard semiconductor testing equipment can be used in conjunction with the nanofabric sensors in order to determine whether analytes are bound to nanofabrics. Examples of standard testing equipment include wafer probes.
[0139] Nanosensors of preferred embodiments of the present invention can be produced on surfaces that can withstand CVD temperatures and also on surfaces that may not withstand such a harsh environment - e.g., when spin coating or aerosol application methods are used to create the nanofabric.
[0140] As stated above, the nanotubes of the nanofabric may be derivatized or functionalized prior to formation of the nanofabric, subsequent to the formation of the fabric, or subsequent to the patterning of the fabric. In the latter case, for example, the three-dimensional structure might not be completely sealed but might instead have open channels whereby the nanofabric could be subjected to a derivatizing or functionalizing agent.
[0141] Note that the electrodes - for example, top electrode 468 of certain illustrated embodiments of the invention - may themselves be formed of nanofabric materials. In some embodiments, having a nanofabric ribbon or other nanofabric article disposed above movable nanofabric element 472 instead of a metallic electrode permits removal of sacrificial materials from beneath the top electrode. Fluid may flow through a nanofabric material disposed above a sacrificial layer to remove the sacrificial material. Likewise, the lower electrode 208 may be formed of a nanofabric material if desired.
[0142] The devices and articles shown and described in the preceding embodiments are given for illustrative purposes only, and other techniques may be used to produce the same or equivalents thereof. Furthermore, the articles shown may be modified by the substitution of other types of materials or the use of different geometries. For example, as described above, rather than using metallic electrodes, some embodiments of the present invention may employ conductive interconnects made from, or comprising, nanotubes.
[0143] Additional electrodes can provide extra control of a switching sensor or non-switching sensor or device constructed according to the present description. For example, Figures 3(A)-(C) include structures with two distinct electrodes that will push and/or pull the nanofabric sections. The gap distances play a part in determining whether the devices are volatile or nonvolatile for a given set of parameters.
[0144] There are other electrode connection locations and geometries possible that one skilled in the art would know to create.
[0145] In order to deliver samples to be examined by the sensor, a microfluidic delivery system may be utilized. Samples of blood, body fluids, chemicals, and the like may be injected or fed into a microfluidic delivery system. Such a system could then move material through a system of microfluidic capillaries and pumps to the sensor site. See, e.g., PCT publication WO 00/62931, "The Use of Microfluidic systems in the Electrochemical Detection of Target Analytes".
[0146] Certain embodiments of the invention provide a hybrid technology circuit 1000, as shown in Figure 10. A core nanosensor cell array 1004 is constructed using nanofabric as outlined above, and that core is surrounded by semiconductor circuits forming X and Y address decoders 1006 and 1008, X and Y buffers 1010 and 1012, control logic 1014, and output buffer 1016. The control circuitry surrounding the nanosensing core may be used for conventional interfacing functions, including providing read currents and sensing output voltages at appropriate times.
Other embodiments may include various forms of logic to analyze the outputs at appropriate times.
[0147] In certain embodiments, the hybrid circuit 1000 may be formed by using a nanotube core (having either just nanosensor cells or nanosensor cells and addressing logic) and by implementing the surrounding circuitry using a field-programmable gate array.
[0148] According to another embodiment of the present invention, analogous to the structure shown in Figure 10, a gas input means 1102 is utilized in place of the microfluidic separator 1002, as shown in structure 1100 of Figure 11.
[0149] Some of the advantages of the sensors according to certain embodiments of the present invention include an ability to implement large-scale application and integration. In addition, one circuit chip may be used for the sensors and for processing of the information from the sensors and for control of the sensors.
This is facilitated by having CMOS-compatible manufacturing processes. Figure 22 illustrates the possibilities for a large-scale array of addressable sensor elements by showing an array of contact holes in which sensor elements might be located.

[0150] Certain embodiments, described below, illustrate methods for detecting changes in electrical properties such as nanosensor capacitance or resistance through use of a current mirror sensing approach, see, e.g., Baker et al., CMOS
Circuit Desig~e, Layout, ayad Si~rzulatioh, pp. 427-33 (1998). Investigators have shown that electrochemical properties of nanotube bundles and single carbon nanotube electrodes are reliable enough that such bundles and individual tubes can be used as electrodes in capacitors, see J.H. Chen et al., "Electrochemistry of Carbon Nanotubes and their Applications in Batteries and Supercapacitors," Electrochem. Soc., Proc., vol.
11, p.
362 (200.1); Y. Tu et al., "Nanoelectrode Arrays Based on Low Site Density Aligned Carbon Nanotubes," Nano Lett., vol. 3, pp. 107-09 (2003); and the present inventors have shown that electrical properties of single nanotubes are significantly maintained in nanofabrics (see references incorporated by reference).
[0151] Figure 12(A) illustrates a cross section of a capacitance modulation structure 1200 coupled to a capacitance detection structure, capacitor CDET

comprising elements 1202, 1204, and 1206. The capacitor CDET 1201 is added to a substrate - e.g., a semiconductor chip - with conductive interconnects in place, or with conductive interconnects placed subsequent to the formation of capacitor CDET
1201. More particularly, in this example, capacitor CDET 1201 is added to the top surface of insulating layer 1218, (an Si3N4 film, for example), of a completed semiconductor structure. Insulating layer 1218 is deposited on insulator 1220.
Insulating layer 1218 supports capacitor CDET 1201. Conductive pad 1202 forms the bottom plate of the nanofabric-based capacitor; insulator 1204 acts as the capacitor dielectric layer, and nanotube fabric 1206 forms the top plate of the capacitor.
Nanotube fabric 1206 is electrically contacted by conductive pad 1208, which contacts pad 1214 using via 1212. The region between pads 1202 and 1214 is filled by a portion of dielectric layer 1216, which may consist, for example, of Si02. Pad 1214 is connected to common reference line 1224 (which may, for example, be a ground line) by vertical stud 1222. Conductive pad 1202, the lower plate of CDET
1201, is connected to N+ diffusion 1226, in N-type semiconductor substrate 1228, by vertical stud 125. Diffusions 1226 and 1232, and gate 1230, form a PFET that is part of the CDET detection circuit.
[0152] Nanotube fabric 1206 has analyte binding molecules 1210 tethered to carbon nanotubes to form a nanofabric/analyte-binding-molecules complex. The nature of the binding molecules can be chosen to allow for specific detection of analytes including molecular species, gases, liquid chemicals, proteins, and other biological molecules that are known to react or bind to each other as outlined in more detail above. Nanotube fabric 1206 is porous: typically, only about 5% of the area is occupied by nanotubes (with the remaining 95% or so typically consisting of voids).
Analyte molecules 1240 form a conductive layer along with the nanofabric/analyte-binding-molecules complex. Non-limiting examples of analyte binding molecules include biotin and non-limiting examples of biotin-specific binding molecules are avidin and streptavidin. Such analyte molecules 1240 fill in voids between nanotubes via interaction with nanotubes or analyte binding molecules 1210 or even derivatizing groups attached to nanotubes, increasing the electric-field coupling area between conductive pad 1202 and nanotube fabric 1206, and increasing the capacitance of capacitor CDET 1201. Capacitance of CDET 1201 can, for example, therefore increase by 20 times, from 5% of the maximum value, with no binding molecules, to the maximum value when all voids are filled with an electrically conducting material.
For a coupling area that is 1 mm by 1 mm, and an Si02 dielectric film (insulator) 1204 of 10 nm in width, examples of possible fabric conditions, relative coupling areas, and estimated capacitances based upon estimated capacitance values for SWNTs are listed in Table 1 below. The values provided are for illustrative purposes, and actual values will vary depending on the composition of SWNTs used and also, for example, processing and derivitization or functionalization conditions.
Condition Relative Coupling Capacitance Area NT fabric only 5% 0.17 nF

Partially filled25% 0.86 nF
voids Partially filled50% 1.72 nF
voids Partially filled75% 2.59 nF
voids Fully filled 100% 3.45 nF
voids Table 1: Capacitor value as a function of void filling [0153] Capacitance of CDET 1201 may be detected directly, or may be measured relative to the capacitance of a reference capacitor CREF~ Figure 12(B) illustrates a cross section of a completed semiconductor structure 1203 that includes reference capacitor CREF 1250. Detector capacitor CDET 1201 and reference capacitor CREF

are both part of the same semiconductor structure. As illustrated in Figure 12(B), CAF 1250 is formed using the CDET 1201 capacitor structure 1200 illustrated in Figure 12(A). Analyte binding molecule (e.g., biotin) 1210 is omitted, and a protective dielectric layer 1207 is added in its place. Other structures need not be changed.
[0154] Figure 13 illustrates circuit 1350 that measures (detects) capacitance (CDET)~ Circuit 1350 combines a current source formed using an NFET current mirror, which sets the current in a PMOS current source mirror that charges CDET with a fixed, controlled current. These current mirror configurations are based on basic current mirror principles described in Baker et al., CMOS Cireuit Design, Layout, and Simulation, pp. 427-33 (1998). The FET current mirror principle is based on keeping NFET transistors T1 and T2, and PMOS transistors T3 and T4 in the saturation region, where FET current I a (VGS-V~)2, VGS is the FET gate-to-source voltage, VTH is the FET threshold voltage, and FET current for both NFET and PFET
transistors is independent of the voltage VDS between FET source and drain.
The value of resistor R, and the voltage V, Vss, and VGS across resistor R, determine the current I. The semiconductor technology for this application is not required to be leading edge; a 1 or 2 um CMOS technology is adequate to fabricate the required circuits. For purposes of tracking between transistors, and transistor parameter control, channel lengths greater than minimum channel lengths are used. For power supply values of V = 2.5 volts, Vss = - 2.5 volts, VGS = 1 volts, and transistor T1 length Ll (LEA) = 5 ~.m and width Wl = 15 ~,m (Wl/Ll = 3), a value of R = 400 ohms will result in a transistor Tl current of 10 ~,A. Because of the current mirror principles, if transistor T2 is also designed with W/L = 3, that is Wl/Ll =
WZ/L2, then the current in transistor T2 is also I = 10 ~.A. With transistor T2 providing the current source for PFET current mirror transistor T3, current I also flows through transistor T3. Transistor T3 is a PMOS transistor and has much lower channel electron mobility than NMOS transistor T2. PMOS transistor T3 is therefore designed with substantially greater width to compensate for the difference in mobility between NMOS and PMOS transistors. For a PMOS channel length L3 (LEFF) = 5 um, the channel width that supports a 10 ~.A current is W3 = 70 um. If transistor T4 is designed with W4/L,4 = W3/L3, then the current in transistor T4 will also be I
= 10 ~.A.

This current charges the detector capacitor CDET~ If switches S 1 and S2 are closed for a time duration T, then the charge Q stored on capacitor CDET 1S Q = I ~' T.
The voltage change VouT across capacitor CDET is calculated as VouT = Q~C. The capacitance change may be determined by measuring the VouT. VouT values are calculated for 10 ~,A applied for 1 ~,s to the capacitance values of Table 1, and are summarized in Table 2 as follows:

Condition Capacitance VouT

NT fabric only 0.17 nF 58.9 mV

Partially filled 0.86 nF 11.6 mV
voids Partially filled 1.72 nF 5.81 mV
voids Partially filled 2.59 nF 3.86 mV
voids Fully filled voids3.45 nF 2.90 mV

Table 2: VouT as a function of capacitance CDET
[0155] Figure 14 illustrates circuit 1450 that measures (detects) the difference in voltage OVouT between capacitance CDET and reference capacitance CREF for purposes of increased measurement sensitivity. The circuit 1450 operating principles are the same as those of circuit 1350. Transistor T4 is used to charge CREF wlth a current I =
uA, and an additional transistor T5 has been added to supply a current I = 10 uA to ~DET~ ~ order to supply current I to CDET, transistor T5 is designed such that Ws/Ls =
W4/L4 = W3/L3. Reference capacitor ~gEF 1S designed such that CREF = CDET~ for NT
fabric with 50% of the voids filled (Table 1). The differential output voltage OVouT of circuit 1450 is summarized in Table 3 as follows:
Condition Capacitance 4VouT

NT fabric only 0.17 nF -53.1 mV

Partially filled 0.86 nF - 5.79 mV
voids Partially filled 1.72 nF 0 mV
voids Partially filled 2.59 nF 1.96 mV
voids Fully filled voids3.45 nF 2.91 mV

Table 3: OVouT as a function of capacitance CDET
(0156] When the output voltage OVouT = 0, then 50% of the voids are filled, a convenient reference point.
[0157] Figure 15 illustrates circuit 1550 that measures (detects) the difference in voltage OVouT between capacitances CDETI~ CDET2~ ~d CDET3 relatlVe to reference capacitor CREF~ Switches S3, S4, and S5 are used to select capacitances CDETI~
CDET2~
and CDET3, respectively. Additional transistors T6 and T7 have been added. The operation is based on the current mirror principles described. Transistors T6 and T7 are designed such that W~/L~ = W6/L6 = WS/LS = W4/L4 = W3/L3, such that all transistors in the PFET current mirror provide a charging current I = 10 uA.
The difference in output voltage ~VouT for each of the capacitors CDETIo CDET2~ ~d used in circuit 1550 is the same as described in Table 3 for CDET in circuit 1450.
[0158] Figure 16(A) illustrates a cross section of a resistance detection structure RDET added to a semiconductor chip. Resistor RDET is added to the top surface of insulating layer 1218, a Si3N4 film, for example, of a completed semiconductor structure, forming resistance modulation structure 1601. Surface insulating layer 1218 is deposited on insulator 1220, and supports resistor RDET~ Conductive pad 1602 forms one contact with the nanotube resistor, with optional second nanotube fabric contact 1608A, and nanotube fabric 1206 forms the resistive fabric RDET~
Nanotube fabric 1206 is electrically contacted by metal pad 1214, with optional second nanotube fabric contact 1608B. Nanotube fabric 1206 has analyte binding molecules 1210 tethered to carbon nanotubes forming nanotube fabric layer 1206, and analyte molecules 1240 bind to analyte binding molecules 1210. A non-limiting example of an analyte binding molecule is biotin, and a non-limiting example of a complementary analyte is streptavidin. In cases involving, for example, gas or molecular species detection, the nanofabric may not require an additional analyte binding molecule but via covalent or noncovalent derivatization or in its pristine form may be capable of sensing specific analytes. Nanotube fabric 1206 is porous, with typically only about 5% of its overall area being occupied by nanotubes (the rest consisting of voids). The precise percentage of porosity is controllable and tunable depending upon the application and level of redundancy and integration desired. Utilizing the nanofabric creation methods herein and incorporated by reference, the inventors envision making nanofabrics with as few or as many nanotubes as are required. Analyte molecules 1240 form a conductive layer, filling in voids between nanotubes, decreasing the resistance within the conductive articles of RDET. Resistance RDET will be reduced from a maximum value with no void areas filled, to a minimum value at which voids are filled with an electrically conducting material. The resistance range is determined experimentally.

[0159] Resistance RDET may be detected directly, or may be measured relative to a reference resistance RREF~ Figure 16(B) illustrates a cross section of a completed semiconductor structure 1603 that includes reference resistor RREF. Detector resistance RDET and reference resistor RREF are both part of the same semiconductor structure. RREg, as illustrated in Figure 16(B), is formed using the RDET
resistance structure illustrated in Figure 16(A). Analyte binding molecules 1210 are omitted, and a protective dielectric layer 1607 is added. Other structures are not changed.
[0160] Figure 17 illustrates the operation of circuit 1750 used to detect the value of RDET~ The current mirror principles of design and operation are essentially the same as those used for circuit 1350 of Figure 13, with RDET substituted for CDET~
[0161] Figure 18 illustrates the operation of circuit 1850 used to detect the voltage difference OVouT between RDET and RREF. The current mirror principles of design and operation are the same as those used for circuit 1450 of Figure 14, with RDET
substituted for CDETa and RREF substituted for CREF~
[0162] Figure 19 illustrates the operation of circuit 1950 used to detect the voltage difference OVouT between RDET and RREF. The current mirror principles of design and operation are the same as those used for circuit 1550 of Figure 15, with RDETi substituted for CDETn RDETa substituted for CDET2, RDETS substituted for CDET3~ ~d RREF substituted for CREF.
[0163] Figure 20(A) illustrates a framed portion of sensing fabric and a method for its creation. Such a framed fabric may be created by providing the fabric 2002 on a substrate 2004, as illustrated by intermediate structure 2000, covering the fabric 2002 with an appropriate covering material 2012, as shown illustrated by intermediate structure 2010, and lithographically patterning and removing a section of the covering material 2012, leaving a "frame" of material around sensing fabric, as shown in intermediate structure 2020. Such a strapping method is more fully described in the incorporated reference entitled "Non-volatile Electromechanical Field Effect Transistors and Methods of Forming Same." The covering material may be conductive, and may act to alter the electrical properties of the entire patterned fabric, or it may be semiconducting or insulating. The material of the strapping layer should be selectively etchable over nanofabric when used alone to open up a window of exposed fabric. The material of the covering layer may be selectively etchable over an intermediate layer disposed between the nanofabric and covering layer. The intermediate layer in this case may act as an etch stop when etching and patterning the covering layer.
[0164] Figure 20(B) illustrates a patterned sensing fabric where no frame is formed, but instead a set of disconnected sections of covering layer are formed.
Disconnected sections may be electrodes and have particularly useful application for resistance modulation detection structures. Intermediate structure 2010 is patterned to form electrodes 2042, as illustrated in intermediate structure 2040.
[0165] Figure 21 illustrates yet another method of patterning nanofabric capacitance sensors. Such a method involves a covering material 2106 that is selectively etchable over an intermediate layer 2104. Covering material 2106 may preferably be a metal, and intermediate layer 2104 may preferably be a semiconductor - e.g., silicon - but any materials suitable for the application will work.
The intermediate layer 2104 is disposed between the nanofabric 2002 and covering layer 2106. The intermediate layer 2104 in this case may act as an etch stop when dry etching and patterning the covering layer 2106. Intermediate structure 2110 illustrates patterned covering layer 2112 in the shape of a frame, however any pattern will work depending on the requirements of the final product. Intermediate structure 2110 is subjected to an annealing step whereby covering layer 2112 and intermediate layer 2104 form a conducting composite layer 2122 - e.g., a metal silicide -permitting creation of structure 2120. Such a composite layer can act as stitching electrode or other contact or addressing element, depending on the use of the final products.
Other Embodimewts [0166] Besides carbon nanotubes, other materials with electronic and mechanical properties suitable for electromechanical switching could be envisioned. These materials would have properties similar to carbon nanotubes but with different and likely reduced tensile strength. For embodiments designed to use or to enable electromechanical switching, the tensile strain and adhesion energies of the material used in place of carbon nanotubes must fall within a range that allows for bistability of the junction and electromechanical switching properties within acceptable tolerances.

[0167] As one example of a use of materials other than carbon nanotubes, it may be noted that the fabric of a nanosensing capacitor may be made entirely of carbon nanotubes, or it may be made from nanowires of various composition - e.g., silicon nanowires - or the fabric might be a composite of nanotubes and nanowires. The creation of such nanowire and composite fabrics is more fully described in incorporated references such as U.S. provisional patent applications entitled "Patterning of Nanoscopic Articles."
[0168] Fluid samples delivered to a sensor element for analyte detection can include both liquids and gases, and may include analytes in a variety of forms - for example, as part of particulate matter suspended in the fluid.
[0169] Further, certain of the above aspects, such as the hybrid circuits and the nanotube technology for addressing, are applicable to individual nanotubes (e.g., using directed growth techniques, etc.) or to nanotube ribbons. As used herein, phrases such as "collection of nanostructures" or "collection of nanotubes"
each generally encompass a number of nanostructures or nanotubes respectively, and potentially other matter, without regard to such considerations as whether any particular constituent or constituents of the collection have a special quality or distinctiveness, or are arranged in a particular way.
[0170] A nanofabric sensor may be used as an electrode in a capacitor.
Investigators have shown that electrochemical properties of nanotube bundles and single carbon nanotube electrodes are reliable enough that such bundles and individual tubes can be used as electrodes in capacitors. See J.H. Chen et al., "Electrochemistry of Carbon Nanotubes and their Applications in Batteries and Supercapacitors," Electrochem. Soc., Proc., vol. 11, p. 362 (2001); Y. Tu et al., "Nanoelectrode Arrays Based on Low Site Density Aligned Carbon Nanotubes,"
Na~ro Lett., vol. 3, no. 1, pp. 107-09 (2003). The present inventors have shown that electrical properties of single nanotubes are significantly maintained in nanofabrics (see incorporated references). It is therefore an object of certain embodiments of the present invention to use nanofabric as an electrode in a capacitor for use as a nanosensor.
[0171] The gaps of a porous nanofabric are especially helpful when capacitance differences are measured, because nanofabric/bound-analyte complexes exhibit different capacitances than the fabric sensor alone, and the capacitance difference is due in part to the greater surface are of the nanofabric alone, as opposed to the nanofabric with bound analytes.
[0172] The term "functionalization," as used herein, generally includes both covalent and non-covalent modifications of nanotubes whereas the term "derivatization" signifies the covalent modification of nanotubes. Hence, functionalization may in certain instances involve non-covalent transformation of the surface of a nanotube into a form with different functional groups or moieties, and, for example, is meant to encompass any alteration, or addition, to a nanotube or nanotube surface - including covalent derivatization - that creates a product with different physical or electrical characteristics. Derivatization is indicative of a covalent alteration of the chemical structure of one or more nanotubes, or a portion thereof. In both circumstances, the process can be controlled such that electrical properties of nanotubes may be substantially retained. Functional groups can include inorganic atoms and molecules as well as organic molecules. Significant biological functional groups include peptides, nucleic acids, antigens (including polypeptide and non-polypeptide antigens) as well as peptide nucleic acids.
[0173] It will be further appreciated that the scope of the present invention is not limited to the above-described embodiments but rather is defined by the appended claims, and that these claims will encompass modifications of and improvements to what has been described.

Claims (158)

What is claimed is:

1. A sensor platform, comprising a sensor element comprising a patterned collection of a plurality of nanotubes and having an electrical characterization;

a support structure for supporting the sensor element so that it may be exposed to a fluid;

control circuitry to electrically sense the electrical characterization of the sensor element so that the presence of a corresponding analyte may be detected.

2. The sensor platform of claim 1 wherein the sensor element also comprises at least one nanowire.

3. The sensor platform of claim 1 wherein the patterned collection of a plurality of nanotubes is a lithographically defined, patterned collection of a plurality of nanotubes.

4. The sensor platform of claim 1 wherein the sensor element has an affinity for the corresponding analyte.

5. The sensor platform of claim 4 wherein the sensor element comprises at least one pristine nanotube.

6. The sensor platform of claim 4 wherein the sensor element comprises at least one nanotube that is derivatized to have or to increase the affinity.

7. The sensor platform of claim 4 wherein the sensor element comprises at least one nanotube that is functionalized to have or to increase the affinity.

8. The sensor platform of claim 1 wherein the sensor element has an affinity for at least two analytes and wherein the plurality of nanotubes includes at least two types of nanotubes, a first type having an affinity for a first analyte and a second type having an affinity for a second analyte.

9. The sensor platform of claim 4 wherein the support structure includes a channel and wherein the sensor element is suspended to span the channel.

10. The sensor platform of claim 9 wherein the support structure includes a conductive electrode positioned in the channel, and wherein the sensor element is deflectable in response to the control circuitry to contact the electrode so that a gating effect of the nanotubes in the sensor element may be electrically detected.

11. The sensor platform of claim 10 further including an upper electrode positioned above the sensor element.

12. The sensor platform of claim 1 including a fluidic separator in fluid communication with the sensor platform to deliver a fluid potentially having the analyte.

13. The sensor platform of claim 1 wherein the sensor element rests flat on the support structure.

14. The sensor platform of claim 1 wherein the sensor element is reusable in that, after exposure to the corresponding analyte, the sensor element can be substantially returned to its pre-exposure state by applying a voltage.

15. The sensor platform of claim 1 further comprising a conductive element located apart from the sensor element so that the conductive element and the sensor element are in a capacitive relationship.

16. The sensor platform of claim 15 wherein the sensor element is on one side of an insulating layer, and the conductive element is on another side of the insulating layer.

17. The sensor platform of claim 15 wherein the control circuitry comprises current-mirror circuitry to allow a capacitance associated with the conductive element and the sensor element to be measured.

18. The sensor platform of claim 17 wherein the control circuitry comprises a reference capacitor to allow measurement of the capacitance associated with the sensor element and the conductive element relative to the capacitance of the reference capacitor.

19. The sensor platform of claim 18 wherein the reference capacitor comprises both a second collection of nanotubes and a second conductive element that is separate from the second collection of nanotubes, so that the second collection of nanotubes and the second conductive element are in a capacitive relationship.

20. The sensor platform of claim 1 further comprising a first conductive element contacting the sensor element at a first point and a second conductive element contacting the sensor element at a second point so that an electric current can run through the sensor element between the first and second conductive elements.

21. The sensor platform of claim 20 wherein the control circuitry comprises current-mirror circuitry to allow the resistance between the first and second contact points to be measured.

22. The sensor platform of claim 21 wherein the control circuitry comprises a reference resistor to allow measurement of the resistance between the first and second contact points relative to the resistance of the reference resistor.

23. The sensor platform of claim 22 wherein the reference resistor comprises a second collection of nanotubes, and third and fourth conductive elements that contact the sensor element at separate points so that an electric current can run through the second collection of nanotubes between the third and fourth conductive elements.

24. A large-scale array of sensor platforms wherein the array includes a large plurality of sensor platform cells, each cell comprising a sensor element comprising a patterned collection of a plurality of nanotubes and having an electrical characterization;

a support structure for supporting the sensor element so that it may be exposed to a fluid;

control circuitry to electrically sense the electrical characterization of at least one sensor element so that the presence of a corresponding analyte may be detected.

25. The large-scale array of claim 24 wherein the sensor element comprises at least one nanowire.

26. A sensor platform, comprising a sensor element comprising a patterned collection of a plurality of nanotubes and having an electrical characterization;

a support structure for supporting the sensor element;

a conductive element located apart from the sensor element to form a structure in which the conductive element and sensor element are in a capacitive relationship;

control circuitry to electrically sense an electrical value reflecting a capacitance associated with the sensor element and the conductive element.

27. The sensor platform of claim 26 wherein the sensor element comprises at least one nanowire.

28. The sensor platform of claim 26 wherein the sensor element is in one side of an insulating layer, and the conductive element is a conductive pad on another side of the insulating layer.

29. The sensor platform of claim 26 wherein the sensor element is substantially surrounded by support structure material so that it is not substantially exposed to potential contact with a fluid.

30. A large-scale array of sensor platforms wherein the array includes a plurality of sensor platform cells, each of which comprises a sensor element comprising a patterned collection of a plurality of nanotubes and having an electrical characterization;

a support structure for supporting the sensor element;

a conductive element located apart from the sensor element to form a structure in which the conductive element and sensor element are in a capacitive relationship;

control circuitry to electrically sense an electrical value reflecting the capacitance associated with the sensor element and the conductive element.

31. The large-scale array of claim 30 wherein the sensor element comprises at least one nanowire.

32. A sensor platform, comprising a sensor element comprising a patterned collection of a plurality of nanotubes and having an electrical characterization;

a support structure for supporting the sensor element;

first and second conductive elements that contact the sensor element at separate locations;

control circuitry to electrically sense a value reflecting the resistance associated with the passage of current between the conductive elements through at least a portion of the sensor element.

33. The sensor platform of claim 32 wherein the sensor element comprises at least one nanowire.

34. The sensor platform of claim 32 wherein the sensor element is substantially surrounded by support structure material so that it is not substantially exposed to potential contact with a fluid.

35. A large-scale array of sensor platforms wherein the array includes a plurality of sensor platform cells, each of which comprises a sensor element comprising a patterned collection of a plurality of nanotubes and having an electrical characterization;

a support structure for supporting the sensor element;

first and second conductive elements that contact the sensor element at separate locations;

control circuitry to electrically sense a value reflecting the resistance associated with the passage of current between the conductive elements through at least a portion of the sensor element.

36. The large-scale array of claim 35 wherein the sensor element comprises at least one nanowire.

37. A method of making a sensor, comprising:

providing a support structure comprising a substrate;

providing a collection of a plurality of nanotubes on the substrate;

defining a pattern within the nanotube collection such that the pattern corresponds to a sensor element;

removing a portion of the collection so that a patterned portion of the collection remains on the substrate to form a sensor element comprising a patterned collection of a plurality of nanotubes and having an electrical characterization;

providing control circuitry to electrically sense the electrical characterization of the sensor element so that the presence of a corresponding analyte may be detected.

38. The method of claim 37 wherein the sensor element comprises at least one nanowire.

39. The method of claim 37 wherein the sensor element has an affinity for the corresponding analyte.

40. The method of claim 39 wherein the resulting sensor element comprises at least one pristine nanotube.

41. The method of claim 39 wherein the resulting sensor element comprises at least one nanotube that is derivatized to have or to increase the affinity.

42. The method of claim 39 wherein the resulting sensor element comprises at least one nanotube that is functionalized to have or to increase the affinity.

43. The method of claim 37 wherein the sensor element has an affinity for at least two analytes and wherein the plurality of nanotubes includes at least two types of nanotubes, a first type having an affinity for a first analyte and a second type having an affinity for a second analyte.

44. The method of claim 39 wherein the support structure includes a channel and wherein the sensor element is suspended to span the channel.

45. The method of claim 44 wherein the support structure includes a conductive electrode positioned in the channel, and wherein the sensor element is deflectable in response to the control circuitry to contact the electrode so that a gating effect of the nanotubes in the sensor element may be electrically detected.

46. The method of claim 45 further including an upper electrode positioned above and separated from the sensor element.

47. The method of claim 37 further including defining a fluidic separator in fluid communication with the sensor element to deliver a fluid potentially having the analyte.

48. The method of claim 37 wherein the sensor element rests flat on the substrate.

49. The method of claim 39 wherein the sensor element is reusable in that, after exposure to the corresponding analyte, the sensor element can be substantially returned to its pre-exposure state by applying a voltage.

50. The method of claim 37 wherein the collection of nanotubes is formed by growing the collection of nanotubes on the substrate using a catalyst.

51. The method of claim 50 wherein, during the growing of the collection of nanotubes, the nanotubes are derivatized to have an affinity for a corresponding analyte.

52. The method of claim 50 wherein, during the growing of the collection of nanotubes, the nanotubes are functionalized to have an affinity for a corresponding analyte.

53. The method of claim 37 wherein the collection of nanotubes is formed by depositing a solution of suspended nanotubes on the substrate.

54. The method of claim 53 wherein the nanotubes are derivatized to have an affinity for a corresponding analyte.

55. The method of claim 53 wherein the nanotubes are functionalized to have an affinity for a corresponding analyte.

56. The method of claim 37 wherein the sensor element is made of pre-derivatized nanotubes.

57. The method of claim 37 wherein the sensor element is made of pre-functionalized nanotubes.

58. The method of claim 37 further comprising derivatizing at least a portion of the pre-patterning collection of nanotubes.

59. The method of claim 37 further comprising functionalizing at least a portion of the pre-patterning collection of nanotubes.

60. The method of claim 37 further comprising derivatizing at least a portion of the patterned collection of nanotubes remaining on the substrate.

61. The method of claim 37 further comprising functionalizing at least a portion of the patterned collection of nanotubes remaining on the substrate.

62. The method of claim 37, further comprising providing a layer of covering material on one side of a collection of nanotubes;
removing a portion of the covering material to expose a portion of the collection.

63. The method of claim 37, further comprising providing a first layer of a first covering material on one side of a collection of nanotubes;
providing a second layer of a second covering material on one side of a collection of nanotubes;
removing a portion of the second covering material;
annealing portions of the first and second covering materials.

64. The method of claim 37 further comprising providing a conductive element located apart from the sensor element so that the sensor element and the conductive element have a capacitive relationship.

65. The method of claim 64 further comprising providing an insulating layer between the conductive element and the sensor element.

66. The method of claim 64 wherein the control circuitry comprises current-mirror circuitry to allow a capacitance associated with the conductive element and the sensor element to be measured.

67. The method of claim 64 further comprising providing a reference capacitor to allow measurement of the capacitance associated with the sensor element and conductive element relative to the capacitance of the reference capacitor.

68. The method of claim 67 wherein the reference capacitor comprises both a second collection of nanotubes and a second conductive element that is separate from the second collection of nanotubes, so that the second collection of nanotubes and the second conductive element have a capacitive relationship.

69. The method of claim 37 further comprising providing a first conductive element that contacts the sensor element at a first point and providing a second conductive element that contacts the sensor element at a second point, so that an electric current can run through the sensor element between the first and second conductive elements.

70. The method of claim 69 wherein the control circuitry comprises current mirror circuitry to allow the resistance between the first and second contact points to be measured.

71. The method of claim 69 further comprising providing a reference resistor to allow measurement, relative to the resistance of the reference resistor, of the resistance associated with current running through the sensor element between the first and second conductive elements.

72. The method of claim 71 wherein the reference resistor comprises both a second collection of nanotubes and a third conductive element and a fourth conductive element that contact the second collection of nanotubes at separate points, so that an electric current can run through the sensor element between the third and fourth conductive elements.

73. A method of making a capacitive structure, comprising providing a support structure comprising a substrate;
providing a collection of a plurality of nanotubes on the support structure;
defining a pattern within the collection of nanotubes such that the pattern corresponds to a sensor element;
removing a portion of the collection so that patterned portion of the collection remains on the substrate to form a sensor element comprising a patterned collection of a plurality of nanotubes and having an electrical characterization;

providing a conductive element located apart from the sensor element to form a structure in which the conductive element and sensor element are in a capacitive relationship;
providing control circuitry to electrically sense a capacitance associated with the conductive element and the sensor element.

74. The method of claim 73 wherein the sensor element comprises at least one nanowire.

75. The method of claim 73 further comprising providing an insulating layer between the conductive element and the sensor element.

76. The method of claim 73 further comprising providing covering material in contact with the sensor element so that it is not substantially exposed to potential contact with a fluid.

77. A method of making a resistive structure, comprising providing a support structure comprising a substrate;
providing a collection of a plurality of nanotubes on the substrate;
defining a pattern within the collection of nanotubes such that the pattern corresponds to a sensor element;
removing a portion of the collection so that patterned portion of the collection remains on the substrate to form a sensor element comprising a patterned collection of a plurality of nanotubes and having an electrical characterization;
providing first and second conductive elements that contact the sensor element at separate locations;
providing control circuitry to electrically sense a value reflecting the resistance associated with the passage of current between the conductive elements through at least a portion of the sensor element.

78. The method of claim 77 wherein the sensor element comprises at least one nanowire.

79. The method of claim 77 further comprising providing covering material in contact with the sensor element so that it is not substantially exposed to potential contact with a fluid.

80. A sensor platform, comprising a sensor element comprising a patterned collection of a plurality of nanowires and having an electrical characterization;
a support structure for supporting the sensor element so that it may be exposed to a fluid;
control circuitry to electrically sense the electrical characterization of the sensor element so that the presence of a corresponding analyte may be detected.

81. The sensor platform of claim 80 wherein the sensor element also comprises at least one nanotube.

82. The sensor platform of claim 80 wherein the patterned collection of a plurality of nanowires is a lithographically defined, patterned collection of a plurality of nanowires.

83. The sensor platform of claim 80 wherein the sensor element has an affinity for the corresponding analyte.

84. The sensor platform of claim 83 wherein the sensor element comprises at least one pristine nanowire.

85. The sensor platform of claim 83 wherein the sensor element comprises at least one nanowire that is derivatized to have or to increase the affinity.

86. The sensor platform of claim 83 wherein the sensor element comprises at least one nanowire that is functionalized to have or to increase the affinity.

87. The sensor platform of claim 80 wherein the sensor element has an affinity for at least two analytes and wherein the plurality of nanowires includes at least two types of nanowires, a first type having an affinity for a first analyte and a second type having an affinity for a second analyte.

88. The sensor platform of claim 83 wherein the support structure includes a channel and wherein the sensor element is suspended to span the channel.

89. The sensor platform of claim 88 wherein the support structure includes a conductive electrode positioned in the channel, and wherein the sensor element is deflectable in response to the control circuitry to contact the electrode so that a gating effect of the nanowires in the sensor element may be electrically detected.

90. The sensor platform of claim 89 further including an upper electrode positioned above the sensor element.

91. The sensor platform of claim 80 including a fluidic separator in fluid communication with the sensor platform to deliver a fluid potentially having the analyte.

92. The sensor platform of claim 80 wherein the sensor element rests flat on the support structure.

93. The sensor platform of claim 80 wherein the sensor element is reusable in that, after exposure to the corresponding analyte, the sensor element can be substantially returned to its pre-exposure state by applying a voltage.

94. The sensor platform of claim 80 further comprising a conductive element located apart from the sensor element so that the conductive element and the sensor element are in a capacitive relationship.

95. The sensor platform of claim 94 wherein the sensor element is on one side of an insulating layer, and the conductive element is on another side of the insulating layer.

96. The sensor platform of claim 94 wherein the control circuitry comprises current-mirror circuitry to allow a capacitance associated with the conductive element and the sensor element to be measured.

97. The sensor platform of claim 96 wherein the control circuitry comprises a reference capacitor to allow measurement of the capacitance associated with the sensor element and the conductive element relative to the capacitance of the reference capacitor.

98. The sensor platform of claim 97 wherein the reference capacitor comprises both a second collection of nanowires and a second conductive element that is separate from the second collection of nanowires, so that the second collection of nanowires and the second conductive element are in a capacitive relationship.

99. The sensor platform of claim 80 further comprising a first conductive element contacting the sensor element at a first point and a second conductive element contacting the sensor element at a second point so that an electric current can run through the sensor element between the first and second conductive elements.

100. The sensor platform of claim 99 wherein the control circuitry comprises current-mirror circuitry to allow the resistance between the first and second contact points to be measured.

101. The sensor platform of claim 100 wherein the control circuitry comprises a reference resistor to allow measurement of the resistance between the first and second contact points relative to the resistance of the reference resistor.

102. The sensor platform of claim 101 wherein the reference resistor comprises a second collection of nanowires, and third and fourth conductive elements that contact the sensor element at separate points so that an electric current can run through the second collection of nanowires between the third and fourth conductive elements.

103. A large-scale array of sensor platforms wherein the array includes a large plurality of sensor platform cells, each cell comprising a sensor element comprising a patterned collection of a plurality of nanowires and having an electrical characterization;
a support structure for supporting the sensor element so that it may be exposed to a fluid;
control circuitry to electrically sense the electrical characterization of at least one sensor element so that the presence of a corresponding analyte may be detected.

104. The large-scale array of claim 103 wherein the sensor element comprises at least one nanotube.

105. A sensor platform, comprising a sensor element comprising a patterned collection of a plurality of nanowires and having an electrical characterization;
a support structure for supporting the sensor element;
a conductive element located apart from the sensor element to form a structure in which the conductive element and sensor element are in a capacitive relationship;
control circuitry to electrically sense an electrical value reflecting the capacitance associated with the sensor element and the conductive element.

106. The sensor platform of claim 105 wherein the sensor element comprises at least one nanotube.

107. The sensor platform of claim 105 wherein the sensor element is in one side of an insulating layer, and the conductive element is a conductive pad on another side of the insulating layer.

108. The sensor platform of claim 105 wherein the sensor element is substantially surrounded by support structure material so that it is not substantially exposed to potential contact with a fluid.

109. A large-scale array of sensor platforms wherein the array includes a plurality of sensor platform cells, each of which comprises a sensor element comprising a patterned collection of a plurality of nanowires and having an electrical characterization;
a support structure for supporting the sensor element;
a conductive element located apart from the sensor element to form a structure in which the conductive element and sensor element are in a capacitive relationship;
control circuitry to electrically sense an electrical value reflecting the capacitance associated with the sensor element and the conductive element.

110. The large-scale array of claim 109 wherein the sensor element comprises at least one nanotube.

111. A sensor platform, comprising a sensor element comprising a patterned collection of a plurality of nanowires and having an electrical characterization;
a support structure for supporting the sensor element;
first and second conductive elements that contact the sensor element at separate locations;
control circuitry to electrically sense a value reflecting the resistance associated with the passage of current between the conductive elements through at least a portion of the sensor element.

112. The sensor platform of claim 111 wherein the sensor element comprises at least one nanotube.

113. The sensor platform of claim 111 wherein the sensor element is substantially surrounded by support structure material so that it is not substantially exposed to potential contact with a fluid.

114. A large-scale array of sensor platforms wherein the array includes a plurality of sensor platform cells, each of which comprises a sensor element comprising a patterned collection of a plurality of nanowires and having an electrical characterization;
a support structure for supporting the sensor element;
first and second conductive elements that contact the sensor element at separate locations;
control circuitry to electrically sense a value reflecting the resistance associated with the passage of current between the conductive elements through at least a portion of the sensor element.

115. The large-scale array of claim 114 wherein the sensor element comprises at least one nanotube.

116. A method of making a sensor, comprising:
providing a support structure comprising a substrate;
providing a collection of a plurality of nanowires on the substrate;
defining a pattern within the nanowire collection such that the pattern corresponds to a sensor element;
removing a portion of the collection so that patterned portion of the collection remains on the substrate to form a sensor element comprising a patterned collection of a plurality of nanowires and having an electrical characterization;
providing control circuitry to electrically sense the electrical characterization of the sensor element so that the presence of a corresponding analyte may be detected.

117. The method of claim 116 wherein the sensor element comprises at least one nanotube.

118. The method of claim 116 wherein the sensor element has an affinity for the corresponding analyte.

119. The method of claim 118 wherein the nanowires are pristine nanowires.

120. The method of claim 118 wherein the nanowires are derivatized to have or to increase the affinity.

121. The method of claim 118 wherein the nanowires are functionalized to have or to increase the affinity.

122. The method of claim 116 wherein the sensor element has an affinity for at least two analytes and wherein the plurality of nanowires includes at least two types of nanowires, a first type having an affinity for a first analyte and a second type having an affinity for a second analyte.

123. The method of claim 118 wherein the support structure includes a channel and wherein the sensor element is suspended to span the channel.

124. The method of claim 123 wherein the support structure includes a conductive electrode positioned in the channel, and wherein the sensor element is deflectable in response to the control circuitry to contact the electrode so that a gating effect of the nanowires in the sensor element may be electrically detected.

125. The method of claim 124 further including an upper electrode positioned above and separated from the sensor element.

126. The method of claim 116 further including defining a fluidic separator in fluid communication with the sensor element to deliver a fluid potentially having the analyte.

127. The method of claim 116 wherein the sensor element rests flat on the substrate.

128. The method of claim 118 wherein the sensor element is reusable in that, after exposure to the corresponding analyte, the sensor element can be substantially returned to its pre-exposure state by applying a voltage.

129. The method of claim 116 wherein the collection of nanowires is formed by growing the collection of nanowires on the substrate using a catalyst.

130. The method of claim 129 wherein, during the growing of the collection of nanowires, the nanowires are derivatized to have an affinity for a corresponding analyte.

131. The method of claim 129 wherein, during the growing of the collection of nanowires, the nanowires are functionalized to have an affinity for a corresponding analyte.

132. The method of claim 116 wherein the collection of nanowires is formed by depositing a solution of suspended nanowires on the substrate.

133. The method of claim 132 wherein the nanowires are derivatized to have an affinity for a corresponding analyte.

134. The method of claim 132 wherein the nanowires are functionalized to have an affinity for a corresponding analyte.

135. The method of claim 116 wherein the sensor element is made of pre-derivatized nanowires.

136. The method of claim 116 wherein the sensor element is made of pre-functionalized nanowires.

137. The method of claim 116 further comprising derivatizing at least a portion of the collection of nanowires.

138. The method of claim 116 further comprising functionalizing at least a portion of the collection of nanowires.

139. The method of claim 116 further comprising derivatizing the patterned collection of nanowires remaining on the substrate.

140. The method of claim 116 further comprising functionalizing the patterned collection of nanowires remaining on the substrate.

141. The method of claim 116, further comprising providing a layer of covering material on one side of the collection of nanowires;
removing a portion of the covering material to expose a portion of the collection.

142. The method of claim 116, further comprising providing a first layer of a first covering material on one side of the sensor element;
providing a second layer of a second covering material on one side of the sensor element;
removing a portion of the second covering material;
annealing portions of the first and second covering materials.

143. The method of claim 116 further comprising providing a conductive element located apart from the sensor element so that the sensor element and the conductive element have a capacitive relationship.

144. The method of claim 143 further comprising providing an insulating layer between the conductive element and the sensor element.

145. The method of claim 143 wherein the control circuitry comprises current-mirror circuitry to allow a capacitance associated with the conductive element and the sensor element to be measured.

146. The method of claim 143 further comprising providing a reference capacitor to allow measurement of the capacitance associated with the sensor element and conductive element relative to the capacitance of the reference capacitor.

147. The method of claim 146 wherein the reference capacitor comprises both a second collection of nanowires and a second conductive element that is separate from the second collection of nanowires, so that the second collection of nanowires and the second conductive element have a capacitive relationship.

148. The method of claim 116 further comprising providing a first conductive element that contacts the sensor element at a first point and providing a second conductive element that contacts the sensor element at a second point, so that an electric current can run through the sensor element between the first and second conductive elements.

149. The method of claim 148 wherein the control circuitry comprises current-mirror circuitry to allow the resistance between the first and second contact points to be measured.

150. The method of claim 148 further comprising providing a reference resistor to allow measurement relative to the resistance of the reference resistor of the resistance associated with current running through the sensor element between the first and second conductive elements.

151. The method of claim 150 wherein the reference resistor comprises both a second collection of nanowires and third and fourth conductive elements that contact the second collection of nanowires at separate points, so that an electric current can run through the sensor element between the third and fourth conductive elements.

152. A method of making a capacitive structure, comprising providing a support structure comprising a substrate;
providing a collection of a plurality of nanowires on the support structure;
defining a pattern within the collection of nanowires such that the pattern corresponds to a sensor element;
removing a portion of the collection so that patterned portion of the collection remains on the substrate to form a sensor element comprising a patterned collection of a plurality of nanowires and having an electrical characterization;

providing a conductive element located apart from the sensor element to form a structure in which the conductive element and sensor element are in a capacitive relationship;
providing control circuitry to electrically sense a capacitance associated with the conductive element and the sensor element.

153. The method of claim 152 wherein the sensor element comprises at least one nanotube.

154. The method of claim 152 further comprising providing an insulating layer between the conductive element and the sensor element.

155. The method of claim 152 further comprising providing covering material in contact with the sensor element so that it is not substantially exposed to potential contact with a fluid.

156. A method of making a resistive structure, comprising providing a support structure;
providing a collection of a plurality of nanowires on the support structure;
defining a pattern within the collection of nanowires such that the pattern corresponds to a sensor element;
removing a portion of the collection so that patterned portion of the collection remains on the substrate to form a sensor element comprising a patterned collection of a plurality of nanowires and having an electrical characterization;
providing first and second conductive elements that contact the sensor element at separate locations;
providing control circuitry to electrically sense a value reflecting the resistance associated with the passage of current between the conductive elements through at least a portion of the sensor element.

157. The method of claim 156 wherein the sensor element comprises at least one nanotube.

158. The method of claim 156 further comprising providing covering material in contact with the sensor element so that it is not substantially exposed to potential contact with a fluid.