WO1996001316A1 - NOVEL GROWTH OR DIFFERENTIATION FACTOR OF THE TGF-β FAMILY - Google Patents

NOVEL GROWTH OR DIFFERENTIATION FACTOR OF THE TGF-β FAMILY Download PDF

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WO1996001316A1
WO1996001316A1 PCT/EP1995/002552 EP9502552W WO9601316A1 WO 1996001316 A1 WO1996001316 A1 WO 1996001316A1 EP 9502552 W EP9502552 W EP 9502552W WO 9601316 A1 WO9601316 A1 WO 9601316A1
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Prior art keywords
protein
sequence
tgf
seq
leu
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PCT/EP1995/002552
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German (de)
French (fr)
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Gertrud Hötten
Helge Neidhardt
Rolf Bechtold
Jens Pohl
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Biopharm Gesellschaft Zur Biotechnologischen Entwicklung Von Pharmaka Mbh
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Priority claimed from DE19511243A external-priority patent/DE19511243A1/en
Application filed by Biopharm Gesellschaft Zur Biotechnologischen Entwicklung Von Pharmaka Mbh filed Critical Biopharm Gesellschaft Zur Biotechnologischen Entwicklung Von Pharmaka Mbh
Priority to AU29798/95A priority Critical patent/AU2979895A/en
Priority to DE19580745T priority patent/DE19580745D2/en
Priority to JP50354696A priority patent/JP3859703B2/en
Publication of WO1996001316A1 publication Critical patent/WO1996001316A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/475Growth factors; Growth regulators
    • C07K14/495Transforming growth factor [TGF]
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P1/00Drugs for disorders of the alimentary tract or the digestive system
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P1/00Drugs for disorders of the alimentary tract or the digestive system
    • A61P1/02Stomatological preparations, e.g. drugs for caries, aphtae, periodontitis
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P1/00Drugs for disorders of the alimentary tract or the digestive system
    • A61P1/16Drugs for disorders of the alimentary tract or the digestive system for liver or gallbladder disorders, e.g. hepatoprotective agents, cholagogues, litholytics
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P13/00Drugs for disorders of the urinary system
    • A61P13/02Drugs for disorders of the urinary system of urine or of the urinary tract, e.g. urine acidifiers
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P15/00Drugs for genital or sexual disorders; Contraceptives
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P25/00Drugs for disorders of the nervous system
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P3/00Drugs for disorders of the metabolism
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P43/00Drugs for specific purposes, not provided for in groups A61P1/00-A61P41/00
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides

Definitions

  • the present invention relates to a new growth / differentiation factor of the TGF / 3 family and DNA sequences coding therefor.
  • the TGF-jß family of growth factors include the BMP, TGF and activin / inhibin related proteins (Roberts and Sporn, Handbook of Experimental Pharmacology 95, 419-472 (1990)). They are relevant for a wide range of medical treatment methods and applications. These factors are useful in procedures related to wound healing and tissue repair. Furthermore, several members of the TGF-? Family tissue growth, such as bone growth.
  • the members of this group have significant structural similarities.
  • the precursor of the protein consists of an amino-terminal signal sequence, a propeptide and a carboxy-terminal sequence of 110 to 140 amino acids, which is cleaved from the precursor and represents the mature protein. Furthermore, their members are defined by an amino acid sequence homology.
  • the mature protein contains the most conserved sequences, particularly seven cysteine residues, which are conserved among family members.
  • the TGF-type proteins are multifunctional, hormonally active growth factors. They also exhibit related biological activities, such as chemotactic attraction of cells, promoting cell differentiation, and tissue-induced skills.
  • EP 0 222 491 AI discloses sequences of inhibin alpha and beta chains.
  • the proteins of the TGF-ß family show differences in their structure, which leads to considerable variations in their exact biological function. Furthermore, they are found in a wide range of different tissue types and stages of development. As a result, they may differ in their exact function, e.g. the required cellular physiological environment, their lifespan, their destinations, their requirements for auxiliary factors and their resistance to degradation. Although numerous proteins that show tissue-inductive potential have been described, their natural functions in the organism and, more importantly, their medical relevance still need to be researched in detail. The presence of as yet unknown members of the TGF-ß family, which are important for the differentiation / induction of different types of tissue, is assumed with great probability.
  • TGF- ⁇ -like proteins A major difficulty in isolating these new TGF- -like proteins, however, is that their functions cannot yet be described precisely enough for the development of a distinctive bioassay.
  • the expected nucleotide sequence homology to known members of the family is too low to allow screening by classic nucleic acid hybridization techniques.
  • the further isolation and characterization of new TGF- ⁇ -like proteins is urgently required in order to provide further induction and differentiation proteins which meet all the desired medical requirements. These factors could find medical application in the healing of damage and the treatment of degenerative diseases of different tissues.
  • Patent application PCT / EP93 / 00350 specifies a nucleotide and amino acid sequence for the TGF- ⁇ protein MP121, with a large part of the sequence corresponding to the mature peptide is specified. The full sequence of the MP121 propeptide is not disclosed.
  • the object on which the present invention is based is to provide DNA sequences which code for new members of the TGF- ⁇ protein family with mitogenic and / or differentiation-inductive potential.
  • the object of the present invention is to provide the complete DNA and amino acid sequence of the TGF protein MP121.
  • sequence (d) a sequence which differs from sequence (a) due to its origin from other vertebrates
  • SEQ ID NO. 1 shows the complete nucleotide sequence of the DNA coding for the human TGF- ⁇ protein MP121.
  • the ATG start codon begins with nucleotide 128.
  • the start of the fully mature protein particularly preferably begins with nucleotide 836.
  • SEQ ID NO.2 shows the complete amino acid sequence of the prepro protein of the human TGF- ⁇ protein MP121, which was derived from the nucleotide sequence shown in SEQ ID NO.l.
  • the start of the mature protein is preferably in the range of amino acids 217-240, particularly preferably at amino acid 236 or 237, most preferably at amino acid 237.
  • SEQ ID NO.3 shows the complete nucleotide sequence of the DNA coding for the TGF- ⁇ protein MP121 from mouse.
  • the coding region begins at the ATG start codon with nucleotide 131 and ends at the stop codon beginning with position 1187.
  • the start of the preferred mature protein begins with nucleotide 839.
  • genomic DNA there is an approximately 5.5 kb between position 446 and 447 big intron.
  • SEQ ID NO.4 shows the complete amino acid sequence of the prepro protein of the TGF-ß protein MP121 from mouse, which was derived from the nucleotide sequence shown in SEQ ID NO.3.
  • the beginning of the mature protein is analogous to the human MP121 in SEQ ID NO.2 in the range of amino acids 217-240.
  • the mature protein begins at amino acid 237, so that the mature portion, like the human MP121, consists of 116 amino acids.
  • Members of the TGF-ß family are often cut behind an RXXR cleavage site to separate the mature portion from the precursor (see ⁇ zkaynak et al., J.Biol.Chem. 267, 25220-25227 (1992) and the literature cited therein). In the case of MP121 from mouse, it is therefore also conceivable for the mature protein to begin at least in part with amino acid 236.
  • SEQ ID NO.5 shows the nucleotide sequence of the human MP121 gene at the exon / intron junctions. The nucleotides from both exons are identified by upper case letters, those of the intron by lower case letters.
  • Figure 1 shows a comparison of the amino acid sequence of human MP121 with some members of the TGF-ß family (inhibin ⁇ and ß chains) starting at the first of the seven conserved cysteine residues. * means that the amino acid is the same in all compared proteins; + means that the amino acid in at least one of the proteins matches in comparison to human MP121.
  • Figure 2 shows the nucleotide sequences of the oligonucleotide primers used in the present invention and a comparison of these sequences with known members of the TGF- ⁇ family.
  • M means A or C
  • S means C or G
  • R means A or G
  • K means G or T.
  • 2a shows the sequence of the primer OD
  • 2b shows the sequence of the primer OID.
  • Figure 3 shows a schematic Western blot with chicken antibodies against human MP121.
  • FIG. 4 shows the expression of MP121 in comparison to activin ⁇ A and ⁇ B in different mouse tissues.
  • FIG. 5 shows a positive influence on the survival of dopaminergic neurons by treatment with partially cleaned MP121.
  • the term "mature protein” also includes functional subregions of the total protein which have essentially the same biological activity and preferably those subregions which contain at least the region of the seven cysteines conserved in the TGF- ⁇ family include.
  • the N-terminus of the mature proteins is slightly modified, that is to say deviates from the sequences shown in SEQ ID NO.2 and 4. Additional amino acids that do not influence the functionality of the protein can be present here as well as amino acids missing, as far as the functionality is not compromised in this case either. is limited.
  • the human and the mouse protein contain all amino acids from amino acid 237 of the amino acid sequence shown in SEQ ID NO.2 and SEQ ID NO.4. It is already known from other family members of the TGF- ⁇ family that the addition of additional amino acids to the N-terminus of the mature protein does not impair the activity, with 6 additional histidines being attached to the N-terminus, among other things.
  • the present invention thus includes the portion coding for the mature protein as defined above and optionally further functional portions of the nucleotide sequence shown in SEQ ID NO.1 as well as sequences which correspond to this sequence in the context of the degeneration of the genetic code and all derivatives of such sequences .
  • the present invention also encompasses DNA sequences which code for a protein of the TGF- ⁇ family which have been obtained from other mammals and which have a sequence which differs to a small extent on account of their origin, but for proteins with the same biological function and in principle also code only slightly different sequence. Such sequences have very large correspondences with one another, as can be seen from a comparison of SEQ ID NO.1 and NO.3.
  • the present invention also comprises sequences hybridizing with such sequences, provided that such a DNA molecule completely contains at least the portion coding for a mature protein of the TGF- ⁇ family (according to the above definition) and that the biological activity is retained.
  • the term “functional part” in the sense of the present invention means a protein part which is capable of acting, for example, as a signal peptide, propeptide or mature protein part, ie performing at least one of the biological functions of the natural parts of MP121.
  • the region coding for the mature portion of the protein preferably extends from nucleotide 836 to the stop codon, which begins at nucleotide 1184 of the sequence shown in SEQ ID No. 1.
  • the DNA molecule can also comprise further functional parts of the sequence shown in SEQ ID NO.1, namely the nucleotide sequences coding for the signal and / or propeptide part.
  • the DNA molecule particularly preferably comprises the sequence for the signal and propeptide portion and the portion of the mature protein, ie the nucleotides 128 to 1184 of the sequence shown in SEQ ID NO.1.
  • the region coding for the mature portion of the protein preferably ranges from nucleotide 839 to the stop codon starting from position 1187 of the sequence shown in SEQ ID NO.3.
  • the DNA molecule can also comprise further functional parts of the sequence shown in SEQ ID NO.3, namely nucleotide sequences coding for signal and / or propeptide parts.
  • the DNA molecules can also contain functional signal and / or propeptide portions of other proteins, for example proteins with cystine knot motif (Cell, Vol. 73 (1993), pp. 421-424) and in particular of other proteins of the TGF-ß family, for example the activin / inhibin or BMP proteins mentioned above, in particular also MP52 (see PCT / EP94 / 02630).
  • proteins with cystine knot motif Cell, Vol. 73 (1993), pp. 421-424
  • other proteins of the TGF-ß family for example the activin / inhibin or BMP proteins mentioned above, in particular also MP52 (see PCT / EP94 / 02630).
  • MP52 see PCT / EP94 / 02630.
  • hybridization means customary hybridization conditions, preferably conditions with a salt concentration of 6 ⁇ SSC at 62 to 66 ° C., followed by a one-hour wash with 0.6 ⁇ SSC, 0.1% SDS at 62 to 66 ° C.
  • Preferred embodiments of the present invention are DNA sequences, as defined above, which are obtainable from vertebrates, preferably mammals, such as pigs, cows and rodents, such as rats or mice, and in particular from primates, such as humans, or corresponding sequences are reproduced.
  • vertebrates preferably mammals, such as pigs, cows and rodents, such as rats or mice, and in particular from primates, such as humans, or corresponding sequences are reproduced.
  • a particularly preferred embodiment of the present invention are those in SEQ ID NO. 1 and 3 and designated as human or mouse MP121 sequences.
  • the transcripts of MP121 were obtained from liver tissue and code for a protein which shows a considerable amino acid homology to the mature part of the inhibin / activin-like proteins (see FIG. 1).
  • Another object of the present invention is a vector which contains at least one copy of a DNA molecule according to the invention.
  • the DNA sequence according to the invention is preferably operatively linked to an expression control sequence.
  • Such vectors are suitable for the production of TGF- ⁇ -like proteins in stably or transiently transformed cells.
  • Various animal, plant, fungus and bacterial systems can be used for transformation and subsequent cultivation.
  • the vectors according to the invention preferably contain sequences necessary for replication in the host cell and can be replicated autonomously. Furthermore, the use of vectors which contain selectable marker genes is preferred, as a result of which the transformation of a host cell can be detected.
  • Another object of the invention is a host cell which is transformed with a DNA or a vector according to the invention.
  • suitable host cells include various eukaryotic and prokaryotic cells such as E.coli, insect cells, plant cells, mammalian cells and fungi such as yeast.
  • Another object of the invention is a protein of the TGF-ß family, which is encoded by a DNA sequence according to claim 1.
  • the protein according to the invention preferably has the amino acid sequence shown in SEQ ID NO.2 or SEQ ID NO.4 or, if appropriate, functional parts thereof (as defined above) and exhibits biological properties, such as tissue inductive capabilities, which may be relevant for therapeutic use are.
  • heterodimers include heterodimers composed of a monomer of the protein according to the invention and monomers of the a, ⁇ A or ⁇ B inhibin chains. The properties resulting from heterodimer formation can be shifted more towards the properties of activin or inhibins.
  • a heterodimer is formed with inhibin ⁇ proteins or with other inhibin ⁇ proteins
  • the MP 121 / inhibin ( ⁇ chain) or MP 121 / activin ( ⁇ A or ⁇ g chain) -Heterodimer could inhibit or activate the production of follicle stimulating hormone (FSH).
  • MP 121 / Aktivin heterodimers could also influence mesoderm development, for example. It can also be expected that heterodimeric forms with a member of the BMP group of TGF- ⁇ proteins lead to an increase in BMP-like activities, such as the ability to induce bone formation, cartilage formation or formation of connective tissue or to promote.
  • the invention therefore furthermore relates to heterodimeric proteins of a protein of the TGF- ⁇ family according to the invention, which is encoded by a DNA sequence according to claim 1, with a monomer of a protein with cystine knot motif, preferably another member of the TGF- ⁇ - Family.
  • a monomer of a protein with cystine knot motif preferably another member of the TGF- ⁇ - Family.
  • Similar heterodi- Other proteins are described in WO93 / 09229, EP 0 626 451 A2 and J. Biol. Chem. 265 (1990), 13198-13205.
  • Another object of the invention are chimeric proteins, the functional derivatives or portions of a protein of the invention encoded by a DNA sequence, as shown preferably in SEQ ID NO.2 or SEQ ID NO.4, in particular functional portions of the mature Have protein and also portions of another protein.
  • the other protein can in turn be a protein with cystine knot motif, which preferably also belongs to the TGF-ß family, e.g. especially MP 52 (PCT / EP94 / 02630).
  • parts of a completely different protein may also be present, e.g. Receptor-binding domains of proteins which give the original MP 121 protein a different specificity.
  • the biological properties of the proteins according to the invention can e.g. in assays according to Wrana et al. (Cell 71, 1003-1014 (1992)) Ling et al. (Proc. Natl. Acad. Of Science, 82, 7217-7221 (1985)), Takuwa et al. (Am. J. Physiol., 257, E797-E803 (1989)), Fann and Patterson (Proc. Natl. Acad. Of Science, 91, 43-47 (1994)), Broxmeyer et al. (Proc. Natl. Acad. Of Science, 85, 9052-9056 (1988)), Green et al. (Cell, 71, 731-739 (1992)), Partridge et al. (Endocrinology, 108, 213-219 (1981)) or Krieglstein et al. (EMBO J.14, 736-742 (1995)).
  • Another object of the present invention is a method for producing a protein of the TGF-ß family, which is characterized in that a host cell transformed with a DNA or a vector according to the invention is cultivated and the TGF- ⁇ protein is obtained from the cell and / or from the culture supernatant.
  • a method comprises culturing the transformed host cell in a suitable culture medium and purifying the TGF- ⁇ -like protein produced.
  • the host cell can be a bacterium such as Bacillus or E.
  • coli a fungus such as yeast
  • a plant cell such as tobacco, potato or Arabidopsis or an animal cell
  • a vertebrate cell line such as Mo-, Cos - or CHO cell lines or an insect cell line.
  • expression can also take place in insect larvae.
  • the protein according to the invention is produced in the form of inclusion bodies. These inclusion bodies are then renatured according to methods known per se and the protein is then obtained in an active form (see, for example, Jaenicke, R. and Rudolph, R., Protein Structure, ed. Creighton, TE, IRL Press, Chapter 9).
  • heterodimeric proteins For the production of heterodimeric proteins with other members of the TGF-ß family, both protein monomers are expressed either in the same cell or separately, a common renaturation also appearing suitable in the case of forms of inclusion bodies. When coexpressing in the same cell, viral systems such as the baculovirus system or the vaccina virus system are particularly suitable.
  • the production of heterodimeric proteins is known in principle to the person skilled in the art and is described, for example, in WO93 / 09229 and EP 0 626 451 A2.
  • Another object of the present invention is to provide pharmaceutical compositions which contain a pharmaceutically effective amount of a TGF-ß-like protein according to the invention as an active ingredient.
  • a composition optionally comprises a pharmaceutically acceptable carrier, auxiliary, diluent or filler.
  • a pharmaceutical composition can be used in wound healing and tissue restoration alone or in combination with other active ingredients, e.g. other proteins of the TGF-ß family or growth factors such as EGF (epidermal growth factor) or PDGF (platelet derived growth factor) can be used.
  • EGF epidermatitisen, fibroblast growth factor
  • PDGF platelet derived growth factor
  • compositions which contain heterodimeric proteins and / or chimeric proteins according to the invention.
  • the pharmaceutical composition according to the invention is preferably used for the treatment and prevention of bone, cartilage, connective tissue, skin, mucous membrane, endothelial, epithelial, neuronal, brain, renal or tooth damage, for use in dental implants , for use in wound healing or tissue restoration processes, as a morphogen for use for inducing liver tissue growth, inducing the proliferation of progenitor cells or bone marrow cells, for maintaining a state of differentiation and for treating fertility disorders or for contraception.
  • the pharmaceutical composition according to the invention can be used in the treatment of metabolic diseases such as diseases of the digestive system or diseases which affect the blood sugar level.
  • TGF- ⁇ -like protein is the use as a suppressor of the immune reaction to avoid rejection of organ transplants or an application in connection with angiogenesis.
  • the protein according to the invention can be used for increasing fertility or contraception.
  • the pharmaceutical composition according to the invention can also be used prophylactically or in cosmetic surgery.
  • the use of the composition is not restricted to humans, but can also include animals, in particular domestic and farm animals.
  • heterodimeric proteins and chimeric proteins the possible use and specificity can also be varied as desired by the proportion of the other protein or other monomer.
  • diseases which are related to the expression of MP 121 can be treated with the proteins according to the invention, on the one hand by increasing the amount or the activity of MP 121 present, and on the other hand by suppressing the MP 121 activity.
  • Another object of the invention is the production of antisense nucleic acids and ribozymes which inhibit the translation of MP 121. This inhibition can take place either by masking the mRNA with an antisense nucleic acid or by cleavage with a ribozyme.
  • antisense nucleic acids The production of antisense nucleic acids is known (Weintraub, HM, Scientific American 262: 40 (1990)). The antisense nucleic acids hybridize with the corresponding mRNA and form a double-stranded molecule, which can then no longer be translated. The use of antisense nucleic acids is, for example, from Marcus-Sekura, CJ, Anal. Biochem. 172 (1988), pp. 289-295.
  • Ribozymes are RNA molecules that have the ability to specifically cleave other single-stranded RNA molecules similar to DNA restriction endonucleases. The production of ribozymes is described in Cech, J. Amer. Med. Assn. 260 (1988), p. 3030.
  • MP 121 antisense polynucleotides can also be introduced into cells which show an undesired expression of MP 121.
  • the MP 121 activity can also be suppressed by binding molecules to the MP 121 receptors which, in contrast to MP 121, do not trigger signal transmission.
  • the MP 121 receptors on cells are therefore also of interest in the context of the invention.
  • different cell lines can first be tested for their binding behavior by radioactively labeled MP121 ( 15 J-MP121) with subsequent cross-linking.
  • a cDNA library can subsequently be created from cells that bind MP121 in an expression vector (available from InVitrogen). Cells transfected with receptor cDNA can then be selected by binding radiolabelled MP121.
  • These are methods known to the person skilled in the art, such as those used for the isolation of activin (Mathews, LS & Vale, WW, Cell 65 (1991), 973-982) and TGF- ⁇ receptors type II (Lin, HY et al.
  • the MP121 receptor is also a receptor complex belonging to this family, so that other methods known to the person skilled in the art, such as, for example, can be used to find parts of the heteromeric complex PCR with degenerate oligonucleotides can be used.
  • This method is e.g. also used for type I activin and TGF-ß receptors (Tsuchida et al., Proc. Natl. Acad. Sci. USA 90 (1993), 11242-11246; Attisano et al., Cell 75 ( 1993), 671-680; Franzen et al., Cell 75 (1993), 681-692).
  • Another object of the present invention is an antibody that can bind specifically to the proteins according to the invention, or such an antibody fragment (e.g. Fab or Fab ').
  • an antibody fragment e.g. Fab or Fab '.
  • Methods for producing such a specific antibody or antibody fragment are well within the ordinary skill in the art.
  • Such an antibody is preferably a monoclonal antibody.
  • Such antibodies or antibody fragments could also be suitable for diagnostic methods.
  • RNA-Guard Pharmacia
  • 2.5 ⁇ g oligo (dT) 12-18 Pharmacia
  • 5 x buffer 250 mmol / 1 Tris / HCl pH 8.5, 50 mmol / 1 MgCl 2 , 50 mmol / 1 DTT, 5 mmol / 1 of each dNTP, 600 mmol / 1 KC1
  • 20 U AMV reverse transcriptase Boehringer Mannheim
  • the reaction mixture (25 ⁇ l) was incubated at 42 ° C. for 2 hours.
  • the cDNA pool was kept at -20 ° C.
  • the deoxynucleotide primers OD and OID shown in FIG. 2 were produced on an automatic DNA synthesizer (biosearch).
  • the purification was carried out by denaturing polyacrylamide gel electophoresis and isolation of the main band from the gel by isotachophoresis.
  • the oligonucleotides were designed by comparing the nucleic acid sequences of known members of the TGF-ß family and selecting regions with high conservation. A comparison of this region is shown in Figure 2. To facilitate the cloning, both oligonucleotides contained Eco R1 sites and OD additionally contained an Nco I restriction site at its 5 'terminus.
  • RNA corresponding cDNA (see 1.2) was used as starting material in the PCR reaction.
  • the reaction was carried out in a volume of 50 ⁇ l and contained 1 ⁇ PCR buffer (16.6 mmol / 1 (NH 4 ) 2 SO 4 , 67 mmol / 1 Tris / HCl pH 8.8, 2 mmol / 1 MgCl 2 , 6.7 ⁇ mol / 1 EDTA, 10 ⁇ vmol / 1 ß-mercaptoethanol, 170 ⁇ g / ml bovine serum albumin (Gibco), 200 ⁇ mol / 1 of each dNTP (Pharmacia), 30 pmol of each oligonucleotide (OD and OID) and 1.5 U Taq polymerase (AmpliTaq, Perkin Elmer Cetus).
  • the reaction mixture was coated with paraffin and 40 PCR cycles were carried out.
  • the products of the PCR reaction were purified by phenol / chloroform extraction and concentrated by
  • Restrictions were carried out in 100 ⁇ l with 8 U enzyme at 37 ° C. for 2 to 12 hours (except for Tfi I at 65 ° C.).
  • a quarter or a fifth of the isolated DNA was reamplified using the same conditions as for the primary amplification, except that the number of cycles was reduced to 13.
  • the reamplification products were purified, cut with the same enzymes as above, and the uncut products were isolated from agarose gels as explained above for the amplification products. The reamplification step was repeated.
  • the clone was completed at the 3 'end of the cDNA according to the method described in detail by Frohmann (published by Perkin-Elmer Corp., Amplifications, 5, 11-15 (1990)).
  • the same liver mRNA used to isolate the first MP121 fragment was reversed as described above transcribed using Oligo dT (16mer) connected to the adapter primer (AGAATTCGCATGCCATGGTCGACGAAGC -T 16 ).
  • the amplification was carried out with the adapter primer (AGAATTCGCATGCCATGGTCGACG) and an internal primer (GGCTACGCCATGAACTTCTGCATA), prepared according to the MP121 sequence.
  • the amplification products were reamplified with a further internal primer (ACATAGCAGGCATGCCTGGTATTG), produced according to the MP-121 sequence, and the adapter primer. After restriction with Sph I, the reamplification products were cloned into the vector pT7 / T3 U19 (Pharmacia) which had also been cut and sequenced. The clones were characterized by their sequence overlap with the already known part of the MP121 sequence. A clone called pl21Lt 3 'MP13 was used to isolate an Nco I (blunted with T4 polymerase) / Sph I fragment.
  • This fragment was cloned into one of the pSK-MP121 (OD / OID) vectors mentioned above, the OD primer sequence of which was oriented to the T7 primer of the pSK multiple cloning site.
  • the vector was restricted with SphI and Smal.
  • the construct was named pMP121DFus6. It contains the MP121 sequence from position 922 to 1360 as shown in SEQ ID NO.1.
  • the cDNA was isolated from the phages via an EcoRI restriction and cloned into the pBluescript SK vector which had also been cleaved with EcoRI. Sequencing of one of the resulting plasmids, SK121L9.1, showed that the start codon begins at position 128 of SEQ ID NO.1 because three stop codons are in-frame in front of this start codon at positions 62, 77 and 92. The start of the mature MP121 is at position 836 of SEQ ID NO.1. If one bases the sequence analogy on other TGF-ß proteins, which corresponds to amino acid 237 in SEQ NO.2. The stop codon begins at position 1184 of SEQ ID NO.l.
  • the plasmid SK121L9.1 was deposited with the DSM on April 26, 1994 under the accession number 9177.
  • the primers ACGAATTCCGACGAGGCATCGACTGC and GCGTCGACTACCATGTCAGGTATGTC were synthesized from the human MP121 sequence with additional restriction sites at the 5 'end (EcoR I or Sal I). These primers were used for amplification on mouse genomic DNA. The resulting 0.35 kb fragment was subcloned into the " Bluescript vector (Stratagene) and used as a radioactive probe. Both a ⁇ bank with genomic mouse DNA and a bank with cDNA were screened according to standard methods. The cDNA was derived from RNA derived from Mouse liver was isolated, synthesized and cloned in ⁇ gtlO provided with EcoR I / Not I linkers.
  • MP121 clones were isolated from both the genomic and the cDNA library.
  • a cDNA containing the entire coding sequence was subcloned into the EcoRI interface of the vector Bluescript SK (Stratagene) and the resulting plasmid SKMP121 mouse was deposited with the DSM on May 10, 1995 (DSM 9964).
  • Complete sequencing gave the sequence shown in SEQ ID NO.3.
  • the start codon begins at position 131 in SEQ ID NO.3 and ends with the stop codon starting at position 1187.
  • the protein derived from the sequence is shown in SEQ ID NO.4.
  • MP121 is possible in both eukaryotic and prokaryotic systems.
  • MP121 Only the mature portion of MP121 was used for expression in prokaryotes. After purification, the mature MP121 protein expressed as a monomer in E. coli can then be folded back into a dimer. In order to simplify the purification of the MP121, 6 histidines can additionally be attached to the N-terminus of the mature protein, which facilitate the purification of the protein by binding to nickel chelate columns.
  • the mature portion of human MP121 (amino acids 237 to 352 in SEQ ID NO.2) with 13 additional amino acids including 6 histidines at the N-terminus (MHHHHHHKLEFAM) was expressed in the prokaryotic vector pBP4.
  • This vector is a pBR322 derivative with tetracycline resistance which additionally contains the T7 promoter from the pBluescript II SK plasmid (Stratagene).
  • the vector after the T7 promoter contains a ribosomal binding site and a start codon followed by 6 codons for Histidine.
  • a terminator follows behind several singular restriction interfaces such as Eco RI, Xho I, Sma I and Apa I for the insertion of inserts and stop codons in all three reading frames.
  • oligonucleotides contain restriction sites added at the ends (Eco RI and Nco I or Xho I and Hind III). The resulting 377 bp fragment was blunt-end cloned into the vector pBluescript II SK (Stra ⁇ tagene) restricted with Eco RV. A clone with the orientation of the 5 'end of MP121 to the T7 promoter was restricted with Eco RI and the resulting insert (0.38 kb) was cloned into the pBP4 vector which was also restricted with Eco RI.
  • the correct orientation of the insert in the resulting plasmid p-BP4MP121His was determined by restriction analysis and sequencing.
  • the plasmid pBP4MP121His was deposited with the DSM on January 30, 1995 (accession number: 9704).
  • MP121 protein can be expressed by simultaneously providing T7 RNA polymerase.
  • the T7-RNA polymerase can be provided by various methods, such as a second plasmid with a gene for T7 RNA polymerase or by infection with phages which code for the T7 RNA polymerase or by special bacterial strains which carry the gene for T7 Have integrated RNA polymerase.
  • a second plasmid with a gene for T7 RNA polymerase or by infection with phages which code for the T7 RNA polymerase or by special bacterial strains which carry the gene for T7 Have integrated RNA polymerase.
  • BL21 DE3
  • pLysS Nova ⁇ gen, # 69451-1
  • the protein in SDS-polyacrylamide gels (15%) has an apparent molecular weight of almost 16 kD (theoretical molecular weight: 14.2 kD), as is shown representatively in the Western blot of FIG. 3.
  • the bacteria transformed with pBP4 as controls each show no staining of specific bacteria. the. Because of the His tag, this protein can be obtained via nickel chelating columns as described, for example, in Hochuli et al. (BIO / Technology Vol. 6, 1321-1325 (1988)). Additional cleaning is possible using a reversed phase HPLC.
  • a reversed phase column (Nucleosil 300-7C4 from Macherey-Nagel, Art.
  • Antibodies from both chickens and rabbits make it possible to specifically detect expression of MP121.
  • chicken antibodies were used which via PEG precipitation (Thalley BS and Carroll, SB, BIO / Technology Vol. 8, 934-938 (1990)) and via membrane-bound antigen (Fusion protein (MS2-MP121)) (18.17 in Sambrook et al. Molecular Cloning, second edition, Cold Spring Harbor Laboratory Press 1989).
  • Anti-Chicken IgG with coupled alkaline phosphatase (Sigma A9171) was used as the second antibody.
  • Detection was carried out using the Tropix Western-Light Protein Detection Kit (Serva # WL10RC) according to the manufacturer's instructions.
  • the monomeric MP121 expressed and purified in E. coli can be combined into one dimeric MP121 can be folded back. This can be done using methods such as those described by Jaenicke, R. & Rudolph, R. (Protein structure, ed. Creighton, TE, IRL Press, chapter 9).
  • the vaccinia virus expression system was used, as described in detail in the Current Protocols in Molecular Biology (Ausubel et al., Greene Publishing Associates and Wiley-Interscience, Wiley & Sons) , hereinafter abbreviated to CP, is described under Chapter 16 Unit 16.15-16.18.
  • the system is based on the fact that foreign DNA can be integrated into the vaccinia virus genome using certain vectors by homologous recombination.
  • the vector used contains the TK (thymidine kinase) gene from the vaccinia genome.
  • the vector further contains the E.
  • gpt coli xanthine guanine phosphoribosyl transferase gene
  • the fragment obtained was intermediate cloned in Bluescript SK (Stratagene), sequenced and checked for agreement with the sequence shown in SEQ ID NO.1.
  • the Sph I / Eco RI fragment (0.22 kb) from the plasmid pBP4MP121His used.
  • the two end fragments of human MP121 were cut via internal restriction cuts (Xba I and Sph I) with the missing middle DNA sequence from the plasmid SK121L9.1 (DSM deposit number: 9177) according to standard methods (Sambrook et al. Molecular Cloning, second edition, Cold Spring Harbor Laboratory Press 1989).
  • the shortened cDNA thus obtained with the complete reading frame for MP121 (nucleotide 128 to nucleotide 1184 in SEQ ID No. 1) could be cloned into the vector pBPl, which had also been cut, by using the restriction sections Barn HI and Eco RI.
  • the resulting plasmid pBPlMP121 was deposited on January 12, 1995 with the DSM (accession number: 9665).
  • the plasmid pBPlMP121 was used for the production of recombinant vaccinia viruses.
  • 80% confluent 143B cells HuTk, ATCC CRL 8303
  • vaccinia wild-type virus in 1 ml PBS for 30 minutes at room temperature with occasional shaking (1 virus per 10 cells).
  • 2 ml of culture medium MEM, Gibco BRL # 041-01095 with penicillin diluted 1: 500 and streptomycin Gibco BRL # 043-05140
  • the medium was then removed and the transformation of these cells with 100 ng pBPlMP121, 2 ⁇ g carrier DNA (calf thymus, treated with ultrasound, Boehringer Mannheim # 104175) and 10 ⁇ l lipofectin (Gibco BRL # 18292-011) in 1 ml MEM for approx 15 h at 37 ° C. After adding 1 ml of MEM with 20% FCS (Sigma # F-7524), the mixture was incubated for a further 24 hours at 37 ° C. and the lysed cells were then frozen.
  • the gpt selection for the xanthine guanine phosphoribosyl transferase and the isolation and amplification of individual recombinant viruses was carried out essentially as in unit 16.17 of the CP described, with the difference that RK13 cells (ATCC CCL 37) were used.
  • the cells were cultivated according to the information provided by the distributors.
  • the confluent cells were infected with three times the number of viruses for 30 minutes at 37 ° C. and then the corresponding culture medium with 10% FCS and penicillin / streptomycin (1: 500, Gibco BRL # 043-05140) was added. After 6 hours at 37 ° C the medium was removed, the cells were washed twice with e.g.
  • HBSS HuTk or DMEM with 4.5 g / 1 glucose and NEAA (Gibco BRL # 11140-035) for NIH-3T3 each mixed with aprotinin (Fluka # 10820, 50 U / ml) and penicillin / streptomycin) added without FCS. After 20 to 22 hours of production, the cell supernatant was collected. Expression was analyzed by Western blots using standard methods (CP Unit 10.8).
  • the proteins were precipitated from 1 to 3 ml of cell culture supernatant by adding the equivalent volume of acetone and incubating on ice for at least one hour and centrifuging. After the pellet had been resuspended in application buffer (7 M urea, 1% SDS, 7 mM sodium dihydrogen phosphate, 0.01% bromophenol blue and optionally 1% ⁇ -mercaptoethanol), it was separated in 15% polyacrylamide gels. A pre-stained protein molecular weight standard was used as the marker protein
  • FIG. 3 A representative schematic drawing of the Western blot results in FIG. 3 shows that MP121-specific bands occur in the cells infected with recombinant viruses.
  • the expression of MP121 in NIH-3T3 cells leads to a secreted protein with a molecular weight of approximately 18 kD appearing in the gel under non-reducing conditions (expected theoretical molecular weight: 25 kD). Under reducing conditions, the protein runs in the gel at approximately 15 kD (expected theoretical molecular weight: 12.5 kD).
  • These results show that, as expected, MP121 is expressed as a dimeric mature protein.
  • the relatively little slower running behavior of the dimeric MP121 protein compared to the monomeric MP121 protein is probably due to a globular structure.
  • the processing of the precursor protein to the mature protein could also be demonstrated in HuTK cells. In cells infected with wild-type viruses (without integrated foreign DNA) (HuTK- or NIH-3T3), no bands appeared in the Western blot.
  • the vaccinia expression system is suitable for cotransfection with recombinant vaccinia viruses that code for different members of the TGF-ß family, especially for the formation of heterodimers. Affinity columns with specific antibodies against the individual TGF-ß family members then make it possible to separate heterodimers from homodimers. Of particular interest are the inhibins, as well as the ⁇ A and ⁇ B chains.
  • RNA from various tissues from 6-week-old mice and from embryonic stem cells was isolated using standard methods. 10 ⁇ g total RNA was used in an RNAse Protection Assay (RPA) from Ambion (RPA II Kit, # 1410) according to the manufacturer's instructions.
  • RPA RNAse Protection Assay
  • mouse genomic DNA 129Sv
  • Primers from the mature portion of the proteins, amplified.
  • EcoR I and / or BamH I or Hind III restriction sites were inserted at the ends of the primers.
  • the primers were derived from the mRNA from rats (GenBank Accession # M37482):
  • degenerate primers were derived from the human sequence (Mason et al., Molecular Endocrinology 3, 1352-1358 (1989):
  • GAGAATTCCA CA (GA) TT (TC) TT (CT) AT and GCAAGCTTT (GA) TA (TC) TC (GA) TC (GA) TC.
  • the resulting PCR fragments were subcloned into the vector pGEM-4 (Promega) and checked.
  • the activin-specific and thus protected in RPA sequences have the fragment size of 369 bp for activin ß A and 254 bp for activin ß ß .
  • the protected fragment comprises the sequence from position 887 to position 1164 in SEQ ID NO.3.
  • the fragments cloned in pGEM-4 were transcribed in vitro to produce the radioactively labeled antisense RNA samples. This was done according to the manufacturer's instructions (Promega, Riboprobe Gemini Systems) using 100 ⁇ m CTP and at the same time ⁇ 32 P-CTP (800 Ci / mmol, Amersham).
  • RNA was synthesized from the plasmid pTri-GAPDH (Ambion # 7431) linearized with Dde I, but using 1 mM CTP. After isolation of the 4 antisense RNA samples from polyacrylamide gels, these were incubated with the respective tissue RNA from mouse (10 ⁇ g total RNA per sample with lxl0 5 cpm) in the same mixture overnight at 42 ° C. The analysis was carried out in a denaturing gel according to standard methods with subsequent autoradiography over 4 days.
  • MP121 protein which was obtained by expression in the vaccinia system (see Example 2), could be partially purified using two columns.
  • confluent NIH-3T3 cells (DSM ACC 59, Swiss mouse embryo) were infected with the same number of recombinant viruses for 30 minutes at 37 ° C. and then the corresponding culture medium with 10% FCS and penicillin / streptomycin was added.
  • the medium was removed, the cells were washed twice and production medium (see Example 2) without FCS was added. After 20 to 22 hours of production, the cell supernatant was collected and centrifuged to remove the viruses (40,000 x g for 30 minutes at 4 ° C.) and filtered (0.1 ⁇ m pore size, Millex W, Millipore # SLW25LS). The control supernatant (wt) after infection by wild-type vaccinia viruses was obtained in a comparable manner. The expression of MP121 was checked by Western blot analysis and estimated to be 50-100 ⁇ g / l.
  • the protease inhibitor PMSF (1 ⁇ M) was added to the cell culture supernatant with MP121 (1.1 1), brought to a final concentration of 1 M (NH 4 ) 2 SO 4 , 20 mM Tris pH 8.0 and to a phenyl Sepharose (Fast Flow (high sub) Pharmacia # 17-0973-05) column (5 ml bed), equilibrated in buffer A (1 M (NH 4 ) 2 SO 4 , 20 mM Tris pH 8.0), loaded.
  • the loaded column was washed with 15 column volumes of buffer A and 10 column volumes of buffer B (20 mM Tris pH 8.0) and with a linear gradient to 100% buffer C (20 mM Tris pH 8.0, 80% ethylene glycol) at a flow rate of 1 ml / min eluted within 50 min (5 ml per fraction).
  • Western blot analysis showed that MP121 elutes between 50 and 80% ethylene glycol. Aliquots of these fractions were made in silver-colored 15% poly acrylamide gels (Silver Stain-II, Daiichi # SE140000) checked and the fractions containing MP121 pooled. The comparable fractions after purification of the control supernatant were also pooled after analysis in gels stained with silver.
  • the pooled fractions were further purified using a reversed phase HPLC.
  • a C8 column (Aquapore RP300, Applied Biosystems, particle size: 7 ⁇ m, pore size: 300 ⁇ ) was equilibrated with buffer A (0.1% trifluoroacetic acid / water). After the column had been loaded with the pooled fractions of the phenyl-Sepharose column containing MP121, the mixture was washed extensively with buffer A. The bound protein was eluted at a flow rate of 0.2 ml / min with a linear gradient of 1.5% buffer B (90% acetonitrile, 0.1% trifluoroacetic acid) per minute.
  • the partially purified MP121 lyophilized after the phenyl Sepharose and reversed phase HPLC was dissolved in 50% acetonitrile and added to the medium.
  • the final concentration of MP121 in the medium is 20 ng / ml (final concentration of acetonitrile is 0.3%).
  • a comparable amount of the comparable purified control supernatant (wt) was dissolved in 50% acetonitrile and used.
  • the medium control also contains 0.3% acetonitrile.
  • the cultures were fixed in 4% paraformaldehyde for 10 min at room temperature, the cells were permeabilized with acetone (10 min, -20 ° C.) and washed with PBS (phosphate buffered saline).
  • TH Tyrosine hydroxylase
  • TH is a limiting enzyme in the biosynthesis of dopamine and other catecholamines, so that TH can be used as a marker for dopa-inert neurons in the present cultures (cells containing noradrenaline are not isolated).
  • TH was demonstrated by incubation for one hour at 37 ° C with a mouse monoclonal antibody against rats TH (diluted 1: 200, Boehringer Mannheim) and subsequent detection with the Vectastain ABC kit (Vecto Labs). The TH-positive cells were counted in an area of 0.12 cm 2 . It can be seen from FIG. 5 that MP121 has a positive influence on the survival of dopaminergic neurons.
  • FIG. 5 shows the number of surviving TH-immunoreactive dopaminergic neurons after isolation from the midbrain of rat embryos (E14) and 8 days of cultivation.
  • the effect of 20 ng / ml partially cleaned MP121 was tested in equal to the equivalent amount of partially purified control supernatant (wt) and untreated neurons (control: medium with 0.3% acetonitrile).
  • the mean ⁇ SEM from a triple determination is shown.
  • FIG. 3 Schematic Western blot with chicken antibodies against MP121
  • Figure 4 Autoradiogram after gel analysis of an RNAse protection assay with specific samples against activin ß A (ß A ), activin ⁇ (ß B ), MP121 and as a control against GAPDH.
  • the unprotected antisense RNA samples used in the hybridization are plotted in lanes 8 and 15 and marked in brackets on the right with the expected fragment size. The bands for the protected fragments are marked on the left edge.
  • pBR322 was restricted with Msp I (Biolabs # 303) and end-labeled with ⁇ - 32 P-ATP (Amersham).
  • FIG. 5 shows the number of surviving TH-immunoreactive dopaminergic neurons after isolation from the midbrain of rat embryos (E14) and 8 days of culture. activation. The effect of 20 ng / ml of partially purified MP121 was tested in comparison to the equivalent amount of partially purified control supernatant (wt) and untreated neurons (control: medium with 0.3% acetonitrile). The mean value j + SEM from a triple determination is shown.
  • TAATACCAAC CTCACCTTGG CTACTCAGTA CCTGCTGGAG GTGGATGCCAGTGGCTGGCA 660
  • AGTGAACCCC AAAACTGAGG GTCCATGCCC AGCATGTTGG GGTGCCATCT TTGACCTGGA 240
  • REPLACEMENT BLA ⁇ (RULE 26) CAAGACGGAT ATACCTGACATGGTGGTCGA GGCCTGCGGG TGTAGTTAGC TTATGGGTGA 1200

Abstract

The invention concerns a protein of the TGF-β family, the DNA which codes for it and a pharmaceutical composition containing such a protein.

Description

Neuer Wachstums-/Differenzierungsfaktor der TGF-/3-FamilieNew growth / differentiation factor of the TGF / 3 family
Beschreibungdescription
Die vorliegende Erfindung betrifft einen neuen Wachstums- /Differenzierungsfaktor der TGF-/3-Familie und dafür codierende DNA-Sequenzen.The present invention relates to a new growth / differentiation factor of the TGF / 3 family and DNA sequences coding therefor.
Zu der TGF-jß-Familie von Wachstumsfaktoren gehören die BMP-, TGF- und Aktivin/Inhibin-verwandten Proteine (Roberts und Sporn, Handbook of Experimental Pharmacology 95, 419-472 (1990) ) . Sie sind für einen weiten Bereich medizinischer Behandlungsmethoden und Anwendungen relevant. Diese Faktoren eignen sich in Verfahren, welche die Wundheilung und die Gewebewiederherstellungbetreffen. Weiterhin induzierenmehrere Mitglieder der TGF-? Familie das Gewebewachstum, wie zum Beispiel das Wachstum von Knochen.The TGF-jß family of growth factors include the BMP, TGF and activin / inhibin related proteins (Roberts and Sporn, Handbook of Experimental Pharmacology 95, 419-472 (1990)). They are relevant for a wide range of medical treatment methods and applications. These factors are useful in procedures related to wound healing and tissue repair. Furthermore, several members of the TGF-? Family tissue growth, such as bone growth.
Wozney (Progress in Growth Factor Research 1 (1989) , 267-280) und Vale et al. (Handbuch of Experimental Pharmacology 95 (1990) , 211-248) beschreiben verschiedene Wachstumsfaktoren, wie etwa diejenigen, die mit der BMP- und der Aktivin/Inhibin- Gruppe verwandt sind. Die Mitglieder dieser Gruppe weisen signifikante strukturelle Ähnlichkeiten auf. Der Vorläufer des Proteins besteht aus einer aminoterminalen Signalsequenz, einer Propeptid- und einer carboxyterminalen Sequenz von 110 bis 140 Aminosäuren, die vom Vorläufer abgespalten wird und das reife Protein darstellt. Weiterhin sind ihre Mitglieder durch eine Aminosäuresequenzhomologie definiert. Das reife Protein enthält die am höchsten konservierten Sequenzen, insbesondere sieben Cysteinreste, die unter den Familiemitgliedern konserviert sind. Die TGF -ß- rtigen Proteine sind multifunktionelle, hormoneil aktive Wachstumsfaktoren. Sie weisen auch verwandte biologische Aktivitäten, wie etwa chemotaktische Attraktion von Zellen, Förderung der Zelldifferenzierung und Gewebe-induzie- rende Fähigkeiten auf. EP 0 222 491 AI offenbart Sequenzen von Inhibin alpha und beta Ketten.Wozney (Progress in Growth Factor Research 1 (1989), 267-280) and Vale et al. (Handbuch of Experimental Pharmacology 95 (1990), 211-248) describe various growth factors, such as those related to the BMP and activin / inhibin groups. The members of this group have significant structural similarities. The precursor of the protein consists of an amino-terminal signal sequence, a propeptide and a carboxy-terminal sequence of 110 to 140 amino acids, which is cleaved from the precursor and represents the mature protein. Furthermore, their members are defined by an amino acid sequence homology. The mature protein contains the most conserved sequences, particularly seven cysteine residues, which are conserved among family members. The TGF-type proteins are multifunctional, hormonally active growth factors. They also exhibit related biological activities, such as chemotactic attraction of cells, promoting cell differentiation, and tissue-induced skills. EP 0 222 491 AI discloses sequences of inhibin alpha and beta chains.
Insgesamt zeigen die Proteine der TGF-ß-Familie Unterschiede in ihrer Struktur, was zu erheblichen Variationen in ihrer genauen biologischen Funktion führt. Weiterhin werden sie in einem weiten Bereich unterschiedlicher Gewebearten und Entwicklungs¬ stufen gefunden. Folglich können sie Unterschiede hinsichtlich ihrer genauen Funktion, z.B. der erforderlichen zellulären physiologischen Umgebung, ihrer Lebensdauer, ihrer Zielorte, ihrer Erfordernisse für Hilfsfaktoren und ihrer Beständigkeit gegen Abbau aufweisen. Obwohl zahlreiche Proteine, die ein Gewebe-induktives Potential zeigen, beschrieben werden, müssen ihre natürlichen Aufgaben im Organismus und -noch bedeutsamer- ihre medizinische Relevanz noch im Detail erforscht werden. Das Vorhandensein von noch unbekannten Mitgliedern der TGF-ß- Familie, die für die Differenzierung/Induktion von verschiede¬ nen Gewebearten bedeutsam sind, wird mit großer Wahrscheinlich¬ keit angenommen. Eine große Schwierigkeit bei der Isolierung dieser neuen TGF- -artigen Proteine besteht jedoch darin, daß ihre Funktionen noch nicht genau genug für die Entwicklung eines unterscheidungskräftigen Bioassays beschrieben werden können. Andererseits ist die erwartete Nukleotidsequenzhomolo- gie zu bekannten Mitgliedern der Familie zu gering, um ein ScreeningdurchklassischeNukleinsäurehybridisierungstechniken zu ermöglichen. Dennoch ist die weitere Isolation und Charak¬ terisierung von neuen TGF-ß-artigen Proteinen dringend erfor¬ derlich, um weitere Induzierungs- und Differenzierungsproteine bereitzustellen, die alle gewünschten medizinischen Erforder¬ nisse erfüllen. Diese Faktoren könnten medizinische Anwendung bei der Heilung von Schäden und der Behandlung von degenerati¬ ven Erkrankungen von verschiedenen Geweben finden.Overall, the proteins of the TGF-ß family show differences in their structure, which leads to considerable variations in their exact biological function. Furthermore, they are found in a wide range of different tissue types and stages of development. As a result, they may differ in their exact function, e.g. the required cellular physiological environment, their lifespan, their destinations, their requirements for auxiliary factors and their resistance to degradation. Although numerous proteins that show tissue-inductive potential have been described, their natural functions in the organism and, more importantly, their medical relevance still need to be researched in detail. The presence of as yet unknown members of the TGF-ß family, which are important for the differentiation / induction of different types of tissue, is assumed with great probability. A major difficulty in isolating these new TGF- -like proteins, however, is that their functions cannot yet be described precisely enough for the development of a distinctive bioassay. On the other hand, the expected nucleotide sequence homology to known members of the family is too low to allow screening by classic nucleic acid hybridization techniques. Nevertheless, the further isolation and characterization of new TGF-β-like proteins is urgently required in order to provide further induction and differentiation proteins which meet all the desired medical requirements. These factors could find medical application in the healing of damage and the treatment of degenerative diseases of different tissues.
In der Patentanmeldung PCT/EP93/00350 ist eine Nukleotid- und Aminosäuresequenz für das TGF-ß-Protein MP121 angegeben, wobei ein Großteil der dem reifen Peptid entsprechenden Sequenz angegeben ist. Die vollständige Sequenz des Propeptids MP121 wird nicht offenbart.Patent application PCT / EP93 / 00350 specifies a nucleotide and amino acid sequence for the TGF-β protein MP121, with a large part of the sequence corresponding to the mature peptide is specified. The full sequence of the MP121 propeptide is not disclosed.
Die der vorliegenden Erfindung zugrundeliegende Aufgabe besteht darin, DNA Sequenzen bereitzustellen, die für neue Mitglieder der TGF-ß-Proteinfamilie mit mitogenem und/oder Differenzie- rungs-induktivem Potential codieren. Insbesondere besteht die Aufgabe der vorliegenden Erfindung darin, die vollständige DNA- und Aminosäuresequenz des TGF-Proteins MP121 bereitzustellen.The object on which the present invention is based is to provide DNA sequences which code for new members of the TGF-β protein family with mitogenic and / or differentiation-inductive potential. In particular, the object of the present invention is to provide the complete DNA and amino acid sequence of the TGF protein MP121.
Diese Aufgabe wird gelöst durch ein DNA-Molekül, das für ein Protein der TGF-ß-Familie codiert undThis object is achieved by a DNA molecule which codes for a protein of the TGF-ß family and
(a) den für das reife Protein codierenden Anteil und gegebe¬ nenfalls weitere funktioneile Anteile der in SEQ ID NO. 1 gezeigten Nukleotidsequenz,(a) the portion coding for the mature protein and, if appropriate, further functional portions of the portion shown in SEQ ID NO. 1 nucleotide sequence shown,
(b) eine der Sequenz aus (a) im Rahmen der Degeneration des genetischen Codes entsprechende Nukleotidsequenz,(b) a nucleotide sequence corresponding to the sequence from (a) in the context of the degeneration of the genetic code,
(c) eine einem allelischen Derivat einer der Sequenzen aus (a) und (b) entsprechende Nukleotidsequenz, oder(c) a nucleotide sequence corresponding to an allelic derivative of one of the sequences from (a) and (b), or
(d) eine von der Sequenz (a) aufgrund ihrer Herkunft aus anderen Wirbeltieren abweichende Sequenz,(d) a sequence which differs from sequence (a) due to its origin from other vertebrates,
(e) eine mit einer der Sequenzen aus (a) , (b) , (c) oder (d) hybridisierende Sequenz umfaßt unter der Voraussetzung, daß ein DNA-Molekül gemäß (e) zumin¬ dest den für ein reifes Protein der TGF-ß-Familie codierenden Anteil enthält.(e) a sequence which hybridizes with one of the sequences from (a), (b), (c) or (d), provided that a DNA molecule according to (e) at least corresponds to a mature protein of the TGF contains β-family coding portion.
Weitere Ausführungsformen der vorliegenden Erfindung betreffen den Gegenstand der Ansprüche 2 bis 10. Andere Merkmale und Vorteile der Erfindung gehen aus der Beschreibung der bevor¬ zugten Ausführungsformen hervor. Die Sequenzprotokolle und Zeichnungen werden jetzt kurz beschrieben.Further embodiments of the present invention relate to the subject matter of claims 2 to 10. Other features and advantages of the invention emerge from the description of the preferred embodiments. The sequence listings and drawings are now briefly described.
SEQ ID NO.l zeigt die vollständige Nukleotidsequenz der für das humane TGF-ß-Protein MP121 codierenden DNA. Das ATG-Startcodon beginnt mit Nukleotid 128. Der Start des vollständigen reifen Proteins beginnt besonders bevorzugt mit Nukleotid 836.SEQ ID NO. 1 shows the complete nucleotide sequence of the DNA coding for the human TGF-β protein MP121. The ATG start codon begins with nucleotide 128. The start of the fully mature protein particularly preferably begins with nucleotide 836.
SEQ ID NO.2 zeigt die vollständige Aminosäuresequenz des Präproproteins des humanen TGF-ß-Proteins MP121, die aus der in SEQ ID NO.l gezeigten Nukleotidsequenz abgeleitet wurde. Der Beginn des reifen Proteins liegt vorzugsweise im Bereich der Aminosäuren 217-240, besonders bevorzugt bei Aminosäure 236 oder 237, am meisten bevorzugt bei Aminosäure 237.SEQ ID NO.2 shows the complete amino acid sequence of the prepro protein of the human TGF-β protein MP121, which was derived from the nucleotide sequence shown in SEQ ID NO.l. The start of the mature protein is preferably in the range of amino acids 217-240, particularly preferably at amino acid 236 or 237, most preferably at amino acid 237.
SEQ ID NO.3 zeigt die vollständige Nukleotidsequenz der für das TGF-ß-Protein MP121 aus Maus codierenden DNA. Der codierende Bereich beginnt am ATG-Startcodon mit Nukleotid 131 und endet am Stoppcodon beginnend mit der Position 1187. Der Start des bevorzugten reifen Proteins beginnt mit Nukleotid 839. In der genomischen DNA befindet sich zwischen Position 446 und 447 ein ca. 5,5 kb großes Intron.SEQ ID NO.3 shows the complete nucleotide sequence of the DNA coding for the TGF-β protein MP121 from mouse. The coding region begins at the ATG start codon with nucleotide 131 and ends at the stop codon beginning with position 1187. The start of the preferred mature protein begins with nucleotide 839. In the genomic DNA there is an approximately 5.5 kb between position 446 and 447 big intron.
SEQ ID NO.4 zeigt die vollständige Aminosäuresequenz des Präproproteins des TGF-ß-Proteins MP121 aus Maus, die aus der in SEQ ID NO.3 gezeigten Nukleotidsequenz abgeleitet wurde. Der Beginn des reifen Proteins liegt in Analogie zum humanen MP121 in SEQ ID NO.2 im Bereich der Aminosäuren 217-240. Am meisten bevorzugt beginnt das reife Protein bei Aminosäure 237, so daß der reife Anteil wie beim humanen MP121 aus 116 Aminosäuren besteht. Mitglieder der TGF-ß-Familie werden zur Abtrennung des maturen Anteils vom precursor häufig hinter einer RXXR Spaltstelle geschnitten (siehe Özkaynak et al. , J.Biol.Chem. 267, 25220-25227 (1992) und die darin zitierte Literatur) . Im Falle von MP121 aus Maus ist deshalb auch ein Beginn des reifen Proteins zumindest zum Teil mit der Aminosäure 236 denkbar.SEQ ID NO.4 shows the complete amino acid sequence of the prepro protein of the TGF-ß protein MP121 from mouse, which was derived from the nucleotide sequence shown in SEQ ID NO.3. The beginning of the mature protein is analogous to the human MP121 in SEQ ID NO.2 in the range of amino acids 217-240. Most preferably, the mature protein begins at amino acid 237, so that the mature portion, like the human MP121, consists of 116 amino acids. Members of the TGF-ß family are often cut behind an RXXR cleavage site to separate the mature portion from the precursor (see Özkaynak et al., J.Biol.Chem. 267, 25220-25227 (1992) and the literature cited therein). In the case of MP121 from mouse, it is therefore also conceivable for the mature protein to begin at least in part with amino acid 236.
SEQ ID NO.5 zeigt die Nukleotidsequenz des humanen MP121 Gens an den Exon/Intron-Übergängen. Die Nukleotide aus beiden Exons sind durch Großbuchstaben gekennzeichnet, die des Introns durch Kleinbuchstaben. Figur 1 zeigt einen Vergleich der Aminosäuresequenz von humanem MP121 mit einigen Mitgliedern der TGF-ß-Familie (Inhibin α- und ß-Ketten) mit Beginn am ersten der sieben konservierten Cysteinreste. * bedeutet, daß die Aminosäure in allen verglichenen Proteinen gleich ist; + bedeutet, daß die Aminosäure in mindestens einem der Proteine im Vergleich zu humanem MP121 übereinstimmt.SEQ ID NO.5 shows the nucleotide sequence of the human MP121 gene at the exon / intron junctions. The nucleotides from both exons are identified by upper case letters, those of the intron by lower case letters. Figure 1 shows a comparison of the amino acid sequence of human MP121 with some members of the TGF-ß family (inhibin α and ß chains) starting at the first of the seven conserved cysteine residues. * means that the amino acid is the same in all compared proteins; + means that the amino acid in at least one of the proteins matches in comparison to human MP121.
Figur 2 zeigt die Nukleotidsequenzen der Oligonukleotidprimer, die in der vorliegenden Erfindung verwendet wurden und einen Vergleich dieser Sequenzen mit bekannten Mitgliedern der TGF-ß- Familie. M bedeutet A oder C, S bedeutet C oder G, R bedeutet A oder G und K bedeutet G oder T. 2a zeigt die Sequenz des Primers OD, 2b zeigt die Sequenz des Primers OID.Figure 2 shows the nucleotide sequences of the oligonucleotide primers used in the present invention and a comparison of these sequences with known members of the TGF-β family. M means A or C, S means C or G, R means A or G and K means G or T. 2a shows the sequence of the primer OD, 2b shows the sequence of the primer OID.
Figur 3 zeigt einen schematisierten Western blot mit Hühner- Antikörpern gegen humanen MP121.Figure 3 shows a schematic Western blot with chicken antibodies against human MP121.
Figur 4 zeigt die Expression von MP121 im Vergleich zu Aktivin ßA und ßB in verschiedenen Mausgeweben.FIG. 4 shows the expression of MP121 in comparison to activin β A and β B in different mouse tissues.
Figur 5 zeigt einen positiven Einfluß auf das Überleben von dopaminergen Neuronen durch Behandlung mit teilgereinigtem MP121.FIG. 5 shows a positive influence on the survival of dopaminergic neurons by treatment with partially cleaned MP121.
Im Rahmen der vorliegenden Erfindung umfaßt der Begriff "reifes Protein" darüber hinaus aber auch funktioneile Teilbereiche des Gesamtproteins, die im wesentlichen gleiche biologische Aktivität aufweisen und vorzugsweise solche Teilbereiche, die mindestens den Bereich der sieben in der TGF-ß-Familie kon¬ servierten Cysteine umfassen. Insbesondere ist es hierbei möglich, daß der N-Terminus der reifen Proteine leicht modifi¬ ziert ist, also von den in SEQ ID NO.2 und 4 gezeigten Sequenzen abweicht. Es können hier sowohl zusätzliche Aminosäuren, die die Funktionalität des Proteins nicht beeinflussen, vorhanden sein als auch Aminosäuren fehlen, soweit auch in diesem Fall die Funktionalität nicht einge- schränkt ist. Bevorzugt ist jedoch, daß das humane und das Maus-Protein alle Aminosäuren ab Aminosäure 237 der in SEQ ID NO.2 und SEQ ID NO.4 gezeigten Aminosäuresequenz enthält. Von anderen Familienmitgliedern der TGF-ß-Familie ist bereits bekannt, daß das Anhängen zusätzlicher Aminosäuren an den N- Terminus des reifen Proteins die Aktivität nicht beeinträch¬ tigt, wobei u.a. 6 zusätzliche Histidine am N-Terminus ange¬ hängt wurden.In the context of the present invention, the term "mature protein" also includes functional subregions of the total protein which have essentially the same biological activity and preferably those subregions which contain at least the region of the seven cysteines conserved in the TGF-β family include. In particular, it is possible here that the N-terminus of the mature proteins is slightly modified, that is to say deviates from the sequences shown in SEQ ID NO.2 and 4. Additional amino acids that do not influence the functionality of the protein can be present here as well as amino acids missing, as far as the functionality is not compromised in this case either. is limited. However, it is preferred that the human and the mouse protein contain all amino acids from amino acid 237 of the amino acid sequence shown in SEQ ID NO.2 and SEQ ID NO.4. It is already known from other family members of the TGF-β family that the addition of additional amino acids to the N-terminus of the mature protein does not impair the activity, with 6 additional histidines being attached to the N-terminus, among other things.
Die vorliegende Erfindung umfaßt also den für das reife Protein gemäß obiger Definition codierenden Anteil und gegebenenfalls weitere funktioneile Anteile der in SEQ ID NO.l gezeigten Nukleotidsequenz sowie Sequenzen, die dieser Sequenz im Rahmen der Degeneration des genetischen Codes entsprechen und alle- lische Derivate solcher Sequenzen. Weiterhin umfaßt die vorliegende Erfindung auch DNA-Sequenzen, die für ein Protein der TGF-ß-Familie codieren, welche erhalten wurden aus anderen Säugern und welche eine in geringem Umfang aufgrund ihrer Herkunft abweichende Sequenz aufweisen, jedoch für Proteine mit prinzipiell gleicher biologischer Funktion und ebenfalls nur gering abweichender Sequenz codieren. Solche Sequenzen weisen sehr große Übereinstimmungen miteinander auf, wie aus einem Vergleich der SEQ ID NO.l und NO.3 zu entnehmen ist.The present invention thus includes the portion coding for the mature protein as defined above and optionally further functional portions of the nucleotide sequence shown in SEQ ID NO.1 as well as sequences which correspond to this sequence in the context of the degeneration of the genetic code and all derivatives of such sequences . Furthermore, the present invention also encompasses DNA sequences which code for a protein of the TGF-β family which have been obtained from other mammals and which have a sequence which differs to a small extent on account of their origin, but for proteins with the same biological function and in principle also code only slightly different sequence. Such sequences have very large correspondences with one another, as can be seen from a comparison of SEQ ID NO.1 and NO.3.
Weiterhin umfaßt die vorliegende Erfindung auch mit derartigen Sequenzen hybridisierende Sequenzen unter der Voraussetzung, daß ein solches DNA-Molekül zumindest den für ein reifes Protein der TGF-ß-Familie (gemäß der obigen Definition) codierenden Anteil vollständig enthält und die biologische Aktivität erhalten bleibt.Furthermore, the present invention also comprises sequences hybridizing with such sequences, provided that such a DNA molecule completely contains at least the portion coding for a mature protein of the TGF-β family (according to the above definition) and that the biological activity is retained.
Der Begriff "funktioneller Anteil" im Sinne der vorliegenden Erfindung bedeutet einen Proteinanteil, der in der Lage ist, z.B. als Signalpeptid-, Propeptid- bzw. reifer Proteinanteil zu wirken, d.h. mindestens eine der biologischen Funktionen der natürlichen Anteile von MP121 erfüllen. Der für den reifen Anteil des Proteins codierende Bereich reicht im Fall des bevorzugten humanen MP121 vorzugsweise von Nukleotid 836 bis zum Stoppcodon, welches bei Nukleotid 1184 der in der SEQ ID No.l gezeigten Sequenz beginnt. Gegebenenfalls kann das DNA-Molekül noch weitere funktioneile Anteile der in SEQ ID NO.l gezeigten Sequenz umfassen, nämlich die für den Signal oder/und Propeptidanteil codierenden Nukleotidsequenzen. Besonders bevorzugt umfaßt das DNA-Molekül die Sequenz für den Signal- und Propeptidanteil und den Anteil des reifen Proteins, d.h. die Nukleotide 128 bis 1184 der in SEQ ID NO.l gezeigten Sequenz. Im Fall des bevorzugten Maus- MP121 reicht der für den reifen Anteil des Proteins codierende Bereich vorzugsweise von Nukleotid 839 bis zum Stoppcodon beginnend mit der Position 1187, der in SEQ ID NO.3 gezeigten Sequenz. Gegebenenfalls kann das DNA-Molekül auch noch weitere funktionelle Anteile der in SEQ ID NO.3 gezeigten Sequenz umfassen, nämlich ggf. Signal- oder/und Propeptidanteil codierende Nukleotidsequenzen.The term “functional part” in the sense of the present invention means a protein part which is capable of acting, for example, as a signal peptide, propeptide or mature protein part, ie performing at least one of the biological functions of the natural parts of MP121. In the case of the preferred human MP121, the region coding for the mature portion of the protein preferably extends from nucleotide 836 to the stop codon, which begins at nucleotide 1184 of the sequence shown in SEQ ID No. 1. Optionally, the DNA molecule can also comprise further functional parts of the sequence shown in SEQ ID NO.1, namely the nucleotide sequences coding for the signal and / or propeptide part. The DNA molecule particularly preferably comprises the sequence for the signal and propeptide portion and the portion of the mature protein, ie the nucleotides 128 to 1184 of the sequence shown in SEQ ID NO.1. In the case of the preferred mouse MP121, the region coding for the mature portion of the protein preferably ranges from nucleotide 839 to the stop codon starting from position 1187 of the sequence shown in SEQ ID NO.3. If necessary, the DNA molecule can also comprise further functional parts of the sequence shown in SEQ ID NO.3, namely nucleotide sequences coding for signal and / or propeptide parts.
Andererseits können die DNA-Moleküle neben dem für das reife Protein codierenden Anteil auch noch funktioneile Signal- oder/und Propeptidanteile von anderen Proteinen, z.B. von Proteinen mit Cystine Knot Motif (Cell, Vol. 73 (1993), S. 421- 424) und insbesondere von anderen Proteinen der TGF-ß-Familie, z.B. den oben genannten Aktivin/Inhibin- oder BMP-Proteinen, insbesondere auch MP52 (siehe PCT/EP94/02630) umfassen. Die entsprechenden Nukleotidsequenzen sind aus den oben genannten Referenzen zu entnehmen, auf deren Offenbarung hiermit Bezug genommen wird. Wichtig ist hierbei, daß der richtige Leserahmen für das reife Protein erhalten bleibt. Je nachdem, in welchen Wirtszellen die Expression stattfindet, könnte das Vorhanden¬ sein einer anderen Signalsequenz oder/und eines anderen Propeptidanteils die Expression positiv beeinflussen. Der Austausch von Propeptidanteilen durch entsprechende Anteile anderer Proteine ist z.B. bei Mol. Endocrinol. 5 (1991), 149- 155 und Proc. Natl. Acad. Sei. USA 90 (1993), 2905-2909 be¬ schrieben. Obwohl die allelischen, degenerierten, aus anderen Wirbeltieren stammenden und hybridisierenden Sequenzen, die von der vorliegenden Erfindung umfaßt werden, strukturelle Unterschiede aufgrund geringfügiger Änderungen in der Nukleotid- oder/und Aminosäuresequenz aufweisen, besitzen die von derartigen Sequenzen codierten Proteine noch im wesentlichen die gleichen nützlichen Eigenschaften, die ihren Einsatz in grundsätzlich den gleichen medizinischen Anwendungen ermöglichen.On the other hand, in addition to the portion coding for the mature protein, the DNA molecules can also contain functional signal and / or propeptide portions of other proteins, for example proteins with cystine knot motif (Cell, Vol. 73 (1993), pp. 421-424) and in particular of other proteins of the TGF-ß family, for example the activin / inhibin or BMP proteins mentioned above, in particular also MP52 (see PCT / EP94 / 02630). The corresponding nucleotide sequences can be found in the above-mentioned references, the disclosure of which is hereby incorporated by reference. It is important that the correct reading frame for the mature protein is preserved. Depending on the host cells in which the expression takes place, the presence of another signal sequence and / or a different propeptide portion could have a positive influence on the expression. The exchange of propeptide portions by corresponding portions of other proteins is, for example, in Mol. Endocrinol. 5 (1991), 149-155 and Proc. Natl. Acad. Be. USA 90 (1993), 2905-2909. Although the allelic, degenerate, other vertebrate and hybridizing sequences encompassed by the present invention have structural differences due to slight changes in the nucleotide or / and amino acid sequence, the proteins encoded by such sequences still have essentially the same useful ones Properties that enable their use in basically the same medical applications.
Gemäß vorliegender Erfindung bedeutet die Bezeichnung "Hybri¬ disierung" übliche Hybridisierungsbedingungen, vorzugsweise Bedingungen mit einer Salzkonzentration von 6 x SSC bei 62 bis 66°C, gefolgt von einem einstündigen Waschen mit 0,6 x SSC, 0,1 % SDS bei 62 bis 66°C.According to the present invention, the term "hybridization" means customary hybridization conditions, preferably conditions with a salt concentration of 6 × SSC at 62 to 66 ° C., followed by a one-hour wash with 0.6 × SSC, 0.1% SDS at 62 to 66 ° C.
Bevorzugte Ausführungsformen der vorliegenden Erfindung sind DNA-Sequenzen, wie oben definiert, die aus Wirbeltieren, vorzugsweise Säugern, wie etwa Schweinen, Kühen und Nagern, wie etwa Ratten oder Mäusen, und insbesondere von Primaten, wie etwa Menschen, erhältlich sind bzw. entsprechenden Sequenzen nachgebildet sind.Preferred embodiments of the present invention are DNA sequences, as defined above, which are obtainable from vertebrates, preferably mammals, such as pigs, cows and rodents, such as rats or mice, and in particular from primates, such as humans, or corresponding sequences are reproduced.
Eine besonders bevorzugte Ausführungsform der vorliegenden Erfindung sind die in SEQ ID NO. 1 und 3 gezeigten und als humanes bzw. Maus-MP121 bezeichneten Sequenzen. Die Transkripte von MP121 wurden aus Leber-Gewebe erhalten und codieren für ein Protein, das eine beträchtliche Aminosäurehomologie zum reifen Teil der Inhibin/Aktivin-artigen Proteine zeigt (siehe Figur 1) . Die Proteinsequenzen von humanem a-Inhibin, Inhibin ßA A particularly preferred embodiment of the present invention are those in SEQ ID NO. 1 and 3 and designated as human or mouse MP121 sequences. The transcripts of MP121 were obtained from liver tissue and code for a protein which shows a considerable amino acid homology to the mature part of the inhibin / activin-like proteins (see FIG. 1). The protein sequences of human a-inhibin, inhibin ß A
(Aktivin ßA) und Inhibin ßB (Aktivin ß^ sind bei Mason et al.(Activin ß A ) and inhibin ß B (activin ß ^ are in Mason et al.
(Biochem. Biophys. Res. Comm. 135, 957-964 (1986)) beschrieben. Einige typische Sequenzhomologien, die für bekannte Inhibin- Sequenzen spezifisch sind, wurden auch im Propeptidteil von MP121 gefunden, während andere Teile des Propeptids von MP121 erhebliche Unterschiede zu Inhibin-Propeptiden zeigen. Nach bisherigen Erkenntnissen unterscheiden sich aber die Expressionsmuster von MP121 und den Aktivinen. Während Aktivine hauptsächlich in den Gonaden exprimiert werden (Aktivin ßA in Ovarien und Aktivin ßu in Hoden und Ovarien) , wird MP121 hauptsächlich in der Leber exprimiert. Die Sensitivität in den bisherigen Versuchen ist jedoch noch nicht ausreichend, um eine auch geringe Expression nachzuweisen. So ist für die Aktivine in der Literatur bspw. beschrieben, daß auch außerhalb der Gonaden Expression in verschiedenen Rattengeweben sowohl in adulten Tieren (Meunier et al., Proc.Natl. Acad.Sci.USA 85, 247-251 (1988) ) als auch während der Embryonalentwicklung (Roberts et al., Endocrinology 128, 3122-3129 (1991)) nachweisbar ist. Es ist daher auch für MP121 möglich, daß eine Expression in anderen Geweben noch festgestellt wird.(Biochem. Biophys. Res. Comm. 135, 957-964 (1986)). Some typical sequence homologies specific to known inhibin sequences have also been found in the propeptide part of MP121, while other parts of the propeptide of MP121 show significant differences from inhibin propeptides. So far, however, the expression patterns of MP121 and the activins differ. While activins are mainly expressed in the gonads (activin ß A in ovaries and activin ß u in testes and ovaries), MP121 is mainly expressed in the liver. However, the sensitivity in the previous experiments is not yet sufficient to detect even low expression. For the activins, for example, it is described in the literature that expression outside the gonadal expression in various rat tissues both in adult animals (Meunier et al., Proc.Natl. Acad.Sci.USA 85, 247-251 (1988)) as is also detectable during embryonic development (Roberts et al., Endocrinology 128, 3122-3129 (1991)). It is therefore also possible for MP121 that expression in other tissues is still detected.
Ein weiterer Gegenstand der vorliegenden Erfindung ist ein Vektor, der mindestens eine Kopie eines erfindungsgemäßen DNA- Moleküls enthält. In einem derartigen Vektor ist die erfin¬ dungsgemäße DNA-Sequenz vorzugsweise operativ mit einer Expressionskontrollsequenz verknüpft. Solche Vektoren eignen sich zur Herstellung von TGF-ß-artigen Proteinen in stabil- oder transient-transformierten Zellen. Verschiedene Tier-, Pflanzen-, Pilz- und Bakteriensysteme können zur Transformation und die anschließende Kultivierung verwendet werden. Vorzugs¬ weise enthalten die erfindungsgemäßen Vektoren für die Replika- tion in der Wirtszelle notwendige Sequenzen und sind autonom replizierbar. Weiterhin ist die Verwendung von Vektoren bevorzugt, die selektierbare Markergene enthalten, wodurch die Transformation einer Wirtszelle nachweisbar ist.Another object of the present invention is a vector which contains at least one copy of a DNA molecule according to the invention. In such a vector, the DNA sequence according to the invention is preferably operatively linked to an expression control sequence. Such vectors are suitable for the production of TGF-β-like proteins in stably or transiently transformed cells. Various animal, plant, fungus and bacterial systems can be used for transformation and subsequent cultivation. The vectors according to the invention preferably contain sequences necessary for replication in the host cell and can be replicated autonomously. Furthermore, the use of vectors which contain selectable marker genes is preferred, as a result of which the transformation of a host cell can be detected.
Ein weiterer Gegenstand der Erfindung ist eine Wirtszelle, die mit einer erfindungsgemäßen DNA oder einem erfindungsgemäßen Vektor transformiert ist. Beispiele von geeigneten Wirtszellen umfassen verschiedene eukaryontische und prokaryontische Zellen wie, etwa E.coli, Insektenzellen, Pflanzenzellen, Säugerzellen und Pilze, wie etwa Hefe. Ein weiterer Gegenstand der Erfindung ist ein Protein der TGF- ß-Familie, das von einer DNA-Sequenz nach Anspruch 1 codiert wird. Vorzugsweise weist das erfindungsgemäße Protein die in SEQ ID NO.2 oder SEQ ID NO.4 gezeigte Aminosäuresequenz oder gegebenenfalls funktionelle Anteile davon (wie oben definiert) auf und zeigt biologische Eigenschaften, wie etwa Gewebe¬ induktive Fähigkeiten, die möglicherweise für eine therapeutische Anwendung relevant sind. Die oben genannten Merkmale des Proteins können abhängig von der Bildung von Homodimeren oder Heterodimeren mit anderen Proteinen mit Cystine Knot Motif und insbesondere TGF-ß-Proteinen variieren. Solche Strukturen können sich ebenfalls für klinische Anwendungen geeignet erweisen und bilden daher ebenfalls einen Gegenstand der vorliegenden Anmeldung. Bevorzugte Heterodimere schließen Heterodimere aus einem Monomer des erfindungsgemäßen Proteins und Monomeren der a-, ßA- oder ßB-Inhibin-Ketten ein. Die sich aus der Heterodimerbildung ergebenden Eigenschaften können mehr in Richtung der Eigenschaften von Aktivin bzw. Inhibinen verschoben sein. Wenn z.B. ein Heterodimer mit Inhibin α-Proteinen bzw. mit anderen Inhibin ß-Proteinen gebildet wird, wird davon ausgegangen, daß das MP 121/Inhibin (α-Kette) - bzw. MP 121/Aktivin (ßA oder ßg-Kette) -Heterodimer die Herstellung von Follikel-stimulierendem Hormon (FSH) inhibieren bzw. aktivieren könnte. MP 121/Aktivin Heterodimere könnten auch z.B. Einfluß auf die Mesoderm-Entwicklung nehmen. Es kann weiterhin erwartet werden, daß heterodimere Formen mit einem Mitglied der BMP-Gruppe der TGF-ß-Proteine dazu führen, daß BMP-ähnliche Aktivitäten verstärkt werden, wie z.B. die Fähigkeit, die Knochenbildung, Knorpelbildung oder Bildung von Bindegewebe zu induzieren bzw. zu fördern.Another object of the invention is a host cell which is transformed with a DNA or a vector according to the invention. Examples of suitable host cells include various eukaryotic and prokaryotic cells such as E.coli, insect cells, plant cells, mammalian cells and fungi such as yeast. Another object of the invention is a protein of the TGF-ß family, which is encoded by a DNA sequence according to claim 1. The protein according to the invention preferably has the amino acid sequence shown in SEQ ID NO.2 or SEQ ID NO.4 or, if appropriate, functional parts thereof (as defined above) and exhibits biological properties, such as tissue inductive capabilities, which may be relevant for therapeutic use are. The above characteristics of the protein may vary depending on the formation of homodimers or heterodimers with other proteins with cystine knot motif and especially TGF-ß proteins. Such structures can also prove to be suitable for clinical applications and therefore also form an object of the present application. Preferred heterodimers include heterodimers composed of a monomer of the protein according to the invention and monomers of the a, βA or βB inhibin chains. The properties resulting from heterodimer formation can be shifted more towards the properties of activin or inhibins. If, for example, a heterodimer is formed with inhibin α proteins or with other inhibin β proteins, it is assumed that the MP 121 / inhibin (α chain) or MP 121 / activin (β A or β g chain) -Heterodimer could inhibit or activate the production of follicle stimulating hormone (FSH). MP 121 / Aktivin heterodimers could also influence mesoderm development, for example. It can also be expected that heterodimeric forms with a member of the BMP group of TGF-β proteins lead to an increase in BMP-like activities, such as the ability to induce bone formation, cartilage formation or formation of connective tissue or to promote.
Ein weiterer Gegenstand der Erfindung sind daher heterodimere Proteine eines erfindungsgemäßen Proteins der TGF-ß-Familie, das von einer DNA-Sequenz nach Anspruch 1 codiert wird, mit einem Monomer eines Proteins mit Cystine Knot Motif, bevorzugt eines anderen Mitglieds der TGF-ß-Familie. Ähnliche heterodi- mere Proteine sind in der WO93/09229, EP 0 626 451 A2 und J. Biol. Chem. 265 (1990) , 13198-13205 beschrieben.The invention therefore furthermore relates to heterodimeric proteins of a protein of the TGF-β family according to the invention, which is encoded by a DNA sequence according to claim 1, with a monomer of a protein with cystine knot motif, preferably another member of the TGF-β- Family. Similar heterodi- Other proteins are described in WO93 / 09229, EP 0 626 451 A2 and J. Biol. Chem. 265 (1990), 13198-13205.
Ein weiterer Gegenstand der Erfindung sind chimäre Proteine, die funktionelle Derivate bzw. Anteile eines von einer erfindungsgemäßen, von einer DNA-Sequenz codierten Proteins, wie vorzugsweise in SEQ ID NO.2 bzw. SEQ ID NO.4 gezeigt, insbesondere funktioneile Anteile des reifen Proteins aufweisen und darüber hinaus Anteile eines anderen Proteins. Das andere Protein kann hierbei wiederum ein Protein mit Cystine Knot Motif sein, das vorzugsweise auch zur TGF-ß-Familie gehört, wie z.B. insbesondere MP 52 (PCT/EP94/02630) . Es können jedoch auch Anteile eines komplett anderen Proteins vorhanden sein, z.B. Rezeptor-bindende Domänen von Proteinen, welche dem ursprüng¬ lichen MP 121-Protein eine andere Spezifität verleihen.Another object of the invention are chimeric proteins, the functional derivatives or portions of a protein of the invention encoded by a DNA sequence, as shown preferably in SEQ ID NO.2 or SEQ ID NO.4, in particular functional portions of the mature Have protein and also portions of another protein. The other protein can in turn be a protein with cystine knot motif, which preferably also belongs to the TGF-ß family, e.g. especially MP 52 (PCT / EP94 / 02630). However, parts of a completely different protein may also be present, e.g. Receptor-binding domains of proteins which give the original MP 121 protein a different specificity.
Die biologischen Eigenschaften der erfindungsgemäßen Proteine, vorzugsweise MP121, können z.B. in Assays gemäß Wrana et al. (Cell 71, 1003-1014 (1992)), Ling et al. (Proc. Natl. Acad. of Science, 82, 7217-7221 (1985)) , Takuwa et al. (Am. J. Physiol., 257, E797-E803 (1989)) , Fann und Patterson (Proc. Natl. Acad. of Science, 91, 43-47 (1994)), Broxmeyer et al. (Proc. Natl. Acad. of Science, 85, 9052-9056 (1988)), Green et al. (Cell, 71, 731-739 (1992)) , Partridge et al. (Endocrinology, 108, 213- 219 (1981)) oder Krieglstein et al. (EMBO J.14, 736-742 (1995)) bestimmt werden.The biological properties of the proteins according to the invention, preferably MP121, can e.g. in assays according to Wrana et al. (Cell 71, 1003-1014 (1992)) Ling et al. (Proc. Natl. Acad. Of Science, 82, 7217-7221 (1985)), Takuwa et al. (Am. J. Physiol., 257, E797-E803 (1989)), Fann and Patterson (Proc. Natl. Acad. Of Science, 91, 43-47 (1994)), Broxmeyer et al. (Proc. Natl. Acad. Of Science, 85, 9052-9056 (1988)), Green et al. (Cell, 71, 731-739 (1992)), Partridge et al. (Endocrinology, 108, 213-219 (1981)) or Krieglstein et al. (EMBO J.14, 736-742 (1995)).
Überlebensfördernde Effekte auf dopaminerge Neurone in vitro wurden beschrieben für Aktivin A und TGF-ß 1, -2 und -3 (Krieglstein et al. , EMBO J.14, 736-742 (1995) und Krieglstein et al., Neuroscience 63, 1189-1196 (1994)) . Für teilgereinigtes MP121 konnte gezeigt werden, daß das Überleben dopaminerger Neurone in einer 8-Tage Kultur über den Einfluß von Kontrollüberstand hinaus gefördert wird (Figur 5) .Survival-promoting effects on dopaminergic neurons in vitro have been described for activin A and TGF-β 1, -2 and -3 (Krieglstein et al., EMBO J.14, 736-742 (1995) and Krieglstein et al., Neuroscience 63, 1189 -1196 (1994)). For partially purified MP121 it could be shown that the survival of dopaminergic neurons in an 8-day culture is promoted beyond the influence of the control supernatant (FIG. 5).
Ein weiterer Gegenstand der vorliegenden Erfindung ist ein Verfahren zur Herstellung eines Proteins der TGF-ß-Familie, welches dadurch gekennzeichnet ist, daß man eine mit einer erfindungsgemäßen DNA oder einem erfindungsgemäßen Vektor transformierte Wirtszelle kultiviert und das TGF-ß-Protein aus der Zelle oder/und aus dem Kulturüberstand gewinnt. Ein solches Verfahren umfaßt die Kultivierung der transformierten Wirts- zelle in einem geeigneten Kulturmedium und die Reinigung des erzeugten TGF-ß-artigen Proteins. Auf diese Weise ermöglicht das Verfahren die Herstellung einer ausreichenden Menge des gewünschten Proteins zum Einsatz bei der medizinischen Behand¬ lung oder in Anwendungen unter Verwendung von Zellkulturtechni¬ ken, bei denen Wachstumsfaktoren benötigt werden. Die Wirts¬ zelle kann ein Bakterium, wie etwa Bacillus oder E.coli, ein Pilz, wie etwa Hefe, eine Pflanzenzelle, wie etwa Tabak, Kartoffel oder Arabidopsis oder eine tierische Zelle, ins¬ besondere eine Wirbeltierzellinie, wie etwa Mo-, Cos- oder CHO- Zellinien oder eine Insektenzellinie sein. Unter Ausnutzung des Baculovirus Systems kann eine Expression auch in Insektenlarven erfolgen. Bei der Herstellung in Bakterien kann es vorkommen, daß das erfindungsgemäße Protein in Form von Einschlußkörpern (inclusion bodies) produziert wird. Diese inclusion bodies werden dann nach an sich bekannten Methoden renaturiert und das Protein dann in einer aktiven Form erhalten (siehe z.B. Jaenicke, R. u. Rudolph, R. , Protein Structure, ed. Creighton, T.E., IRL Press, Chapter 9) . Zur Herstellung von heterodimeren Proteinen mit anderen Mitgliedern der TGF-ß-Familie werden beide Proteinmonomere entweder in derselben Zelle oder getrennt exprimiert, wobei auch eine gemeinsame Renaturierung bei anfallenden Formen von inclusion bodies geeignet erscheint. Bei Coexpression in derselben Zelle sind insbesondere auch virale Systeme, wie z.B. das Baculoviren-System oder das Vaccina Virus System geeignet. Die Herstellung von heterodimeren Proteinen ist prinzipiell dem Fachmann bekannt und z.B. in der WO93/09229 und der EP 0 626 451 A2 beschrieben.Another object of the present invention is a method for producing a protein of the TGF-ß family, which is characterized in that a host cell transformed with a DNA or a vector according to the invention is cultivated and the TGF-β protein is obtained from the cell and / or from the culture supernatant. Such a method comprises culturing the transformed host cell in a suitable culture medium and purifying the TGF-β-like protein produced. In this way, the method enables a sufficient amount of the desired protein to be produced for use in medical treatment or in applications using cell culture techniques in which growth factors are required. The host cell can be a bacterium such as Bacillus or E. coli, a fungus such as yeast, a plant cell such as tobacco, potato or Arabidopsis or an animal cell, in particular a vertebrate cell line such as Mo-, Cos - or CHO cell lines or an insect cell line. Using the baculovirus system, expression can also take place in insect larvae. When produced in bacteria, it can happen that the protein according to the invention is produced in the form of inclusion bodies. These inclusion bodies are then renatured according to methods known per se and the protein is then obtained in an active form (see, for example, Jaenicke, R. and Rudolph, R., Protein Structure, ed. Creighton, TE, IRL Press, Chapter 9). For the production of heterodimeric proteins with other members of the TGF-ß family, both protein monomers are expressed either in the same cell or separately, a common renaturation also appearing suitable in the case of forms of inclusion bodies. When coexpressing in the same cell, viral systems such as the baculovirus system or the vaccina virus system are particularly suitable. The production of heterodimeric proteins is known in principle to the person skilled in the art and is described, for example, in WO93 / 09229 and EP 0 626 451 A2.
Die Herstellung von Chimären Proteinen mit anderen Protein¬ anteilen erfordert eine entsprechende Veränderung auf DNA- Ebene, die dem Fachmann geläufig ist und durch ihn durchgeführt werden kann (EMBO J. 10 (1991), 2105-2110; Cell 69 (1992), 329- 341; J. Neurosci. 39 (1994), 195-210) .The production of chimeric proteins with other protein proportions requires a corresponding change at the DNA level, which is familiar to the person skilled in the art and carried out by him (EMBO J. 10 (1991), 2105-2110; Cell 69 (1992), 329-341; J. Neurosci. 39 (1994), 195-210).
Noch ein weiterer Gegenstand der vorliegenden Erfindung ist die Bereitstellung von pharmazeutischen Zusammensetzungen, die eine pharmazeutisch wirksame Menge eines erfindungsgemäßen TGF-ß- artigen Proteins als Wirkstoff enthalten. Gegebenenfalls umfaßt eine solche Zusammensetzung einen pharmazeutischen aktzeptablen Träger-, Hilfs-, Verdünnungs- oder Füllstoff. Eine solche pharmazeutische Zusammensetzung kann bei der Wundheilung und Gewebewiederherstellung alleine oder in Kombination mit anderen Wirkstoffen, z.B. anderen Proteinen der TGF-ß-Familie oder Wachstumsfaktoren, wie etwa EGF (epidermal growth factor) oder PDGF (platelet derived growth factor) verwendet werden. Ferner kann eine solche pharmazeutische Zusammensetzung bei der Krankheitsprävention verwendet werden.Another object of the present invention is to provide pharmaceutical compositions which contain a pharmaceutically effective amount of a TGF-ß-like protein according to the invention as an active ingredient. Such a composition optionally comprises a pharmaceutically acceptable carrier, auxiliary, diluent or filler. Such a pharmaceutical composition can be used in wound healing and tissue restoration alone or in combination with other active ingredients, e.g. other proteins of the TGF-ß family or growth factors such as EGF (epidermal growth factor) or PDGF (platelet derived growth factor) can be used. Such a pharmaceutical composition can also be used in disease prevention.
Weitere Gegenstände sind pharmazeutische Zusammensetzungen, die erfindungsgemäße heterodimere Proteine oder/und chimäre Proteine enthalten.Further subjects are pharmaceutical compositions which contain heterodimeric proteins and / or chimeric proteins according to the invention.
Bevorzugt wird die erfindungsgemäße pharmazeutische Zusammen¬ setzung eingesetzt zur Behandlung und Prävention von Knochen-, Knorpel-, Bindegewebs-, Haut-, Schleimhaut-, Endothel-, Epithelial-, Neuronal-, Hirn-, Renal- oder Zahnschädigungen, zur Anwendung bei Zahnimplantaten, zur Anwendung in Wundhei- lungs- oder Gewebewiederherstellungsprozessen, als Morphogen zum Einsatz zur Induktion von Lebergewebewachstum, Induktion der Proliferation von Vorläuferzellen oder Knochenmarkszellen, zur Beibehaltung eines Differenzierungszustandes und zur Behandlung von Fertilitätsstörungen oder zur Empfängnisverhü¬ tung. Weiterhin kann die erfindungsgemäße pharmazeutische Zusammensetzung eingesetzt werden bei der Behandlung von StoffWechselerkrankungen wie z.B. Erkrankungen des Verdauungs¬ systems oder Erkrankungen, die den Blutzuckerspiegel betreffen. Eine andere mögliche klinische Anwendung des erfindungsgemäßen TGF-ß-artigen Proteins ist die Verwendung als Suppressor der Immunreaktion zur Vermeidung der Abstoßung von Organtrans¬ plantaten oder ein Einsatz im Zusammenhang mit der Angiogenese. Ferner kann das erfindungsgemäße Protein zur Fertilitäts- steigerung oder Empfängnisverhütung eingesetzt werden. Die erfindungsgemäße pharmazeutische Zusammensetzung kann auch prophylaktisch oder in der kosmetischen Chirugie verwendet werden. Weiterhin ist die Anwendung der Zusammensetzung nicht auf Menschen beschränkt, sondern kann auch Tiere, insbesondere Haus- und Nutztiere umfassen.The pharmaceutical composition according to the invention is preferably used for the treatment and prevention of bone, cartilage, connective tissue, skin, mucous membrane, endothelial, epithelial, neuronal, brain, renal or tooth damage, for use in dental implants , for use in wound healing or tissue restoration processes, as a morphogen for use for inducing liver tissue growth, inducing the proliferation of progenitor cells or bone marrow cells, for maintaining a state of differentiation and for treating fertility disorders or for contraception. Furthermore, the pharmaceutical composition according to the invention can be used in the treatment of metabolic diseases such as diseases of the digestive system or diseases which affect the blood sugar level. Another possible clinical application of the TGF-β-like protein according to the invention is the use as a suppressor of the immune reaction to avoid rejection of organ transplants or an application in connection with angiogenesis. Furthermore, the protein according to the invention can be used for increasing fertility or contraception. The pharmaceutical composition according to the invention can also be used prophylactically or in cosmetic surgery. Furthermore, the use of the composition is not restricted to humans, but can also include animals, in particular domestic and farm animals.
Im übrigen kann bei heterodimeren Proteinen und chimären Proteinen die Einsatzmöglichkeit und Spezifität auch durch den Anteil des anderen Proteins bzw. anderen Monomers wie gewünscht variiert werden.In addition, with heterodimeric proteins and chimeric proteins, the possible use and specificity can also be varied as desired by the proportion of the other protein or other monomer.
Generell können mit den erfindungsgemäßen Proteinen Krankheiten behandelt werden, die mit der Expression von MP 121 zusammen¬ hängen, einerseits durch die Erhöhung der Menge bzw. der Aktivität an vorhandenem MP 121, auf der anderen Seite auch durch Unterdrückung der MP 121-Aktivität. So ist ein weiterer Gegenstand der Erfindung die Herstellung von Antisense-Nu- kleinsäuren und Ribozymen, die die Translation von MP 121 hemmen. Diese Hemmung kann entweder durch Maskieren der mRNA mit einer Antisense-Nukleinsäure erfolgen oder durch Spaltung mit einem Ribozym.In general, diseases which are related to the expression of MP 121 can be treated with the proteins according to the invention, on the one hand by increasing the amount or the activity of MP 121 present, and on the other hand by suppressing the MP 121 activity. Another object of the invention is the production of antisense nucleic acids and ribozymes which inhibit the translation of MP 121. This inhibition can take place either by masking the mRNA with an antisense nucleic acid or by cleavage with a ribozyme.
Die Herstellung von Antisense-Nukleinsäuren ist bekannt (Weintraub, H.M. , Scientific American 262: 40 (1990)). Die Antisense-Nukleinsäuren hybridisieren mit der entsprechenden mRNA und bilden ein doppelsträngiges Molekül, welches dann nicht mehr translatiert werden kann. Die Verwendung von Antisense-Nukleinsäuren ist z.B. aus Marcus-Sekura, C.J., Anal. Biochem. 172 (1988), S.289-295 bekannt. Ribozyme sind RNA-Moleküle, die die Fähigkeit besitzen, spezifisch andere einzelsträngige RNA-Moleküle ähnlich wie DNA- Restriktionsendonukleasen zu spalten. Die Herstellung von Ribozymen ist in Cech, J. Amer. Med. Assn. 260 (1988), S. 3030 beschrieben.The production of antisense nucleic acids is known (Weintraub, HM, Scientific American 262: 40 (1990)). The antisense nucleic acids hybridize with the corresponding mRNA and form a double-stranded molecule, which can then no longer be translated. The use of antisense nucleic acids is, for example, from Marcus-Sekura, CJ, Anal. Biochem. 172 (1988), pp. 289-295. Ribozymes are RNA molecules that have the ability to specifically cleave other single-stranded RNA molecules similar to DNA restriction endonucleases. The production of ribozymes is described in Cech, J. Amer. Med. Assn. 260 (1988), p. 3030.
Erfindungsgemäß ist es hierbei auch möglich, geeignete Vektoren mit der erfindungsgemäßen DNA-Sequenz in vitro oder in vivo in Patientenzellen zu transfizieren oder die Vektoren in vitro in Zellen zu transfizieren und diese dann einem Patienten zu implantieren. Ebenso können MP 121-Antisense-Polynukleotide in Zellen eingebracht werden, die eine ungewünschte Expression von MP 121 zeigen.According to the invention, it is also possible to transfect suitable vectors with the DNA sequence according to the invention in vitro or in vivo in patient cells or to transfect the vectors in vitro in cells and then implant them in a patient. MP 121 antisense polynucleotides can also be introduced into cells which show an undesired expression of MP 121.
Eine Unterdrückung der MP 121-Aktivität kann auch erfolgen durch Bindung von Molekülen, die im Gegensatz zu MP 121 keine Signalweiterleitung auslösen, an die MP 121-Rezeptoren.The MP 121 activity can also be suppressed by binding molecules to the MP 121 receptors which, in contrast to MP 121, do not trigger signal transmission.
Es sind daher im Rahmen der Erfindung auch die Rezeptoren für MP 121 an Zellen von Interesse. Zum Auffinden von Rezeptoren können zunächst verschiedene Zellinien auf ihr Bindungsverhal¬ ten von radioaktiv markiertem MP121 (15J-MP121) mit anschlies- sendem cross-linking getestet werden. Von Zellen, die MP121 binden, kann nachfolgend eine cDNA-Bibliothek in einem Ex¬ pressionsvektor (erhältlich bei InVitrogen) angelegt werden. Zellen, die mit Rezeptor-cDNA transfiziert wurden, können dann über die Bindung von radioaktiv markiertem MP121 selektiert werden. Dies sind dem Fachmann bekannte Methoden, wie sie z.B. für die Isolierung von Aktivin- (Mathews, L.S. & Vale, W.W. , Cell 65 (1991) , 973-982) und TGF-ß-Rezeptoren Typ II (Lin, H. Y. et al., Cell 68 (1992), 775-785) verwendet wurden. Es ist in Analogie zu den bekannten Aktivin-Rezeptoren zu vermuten, daß es sich bei dem MP121-Rezeptor ebenfalls um einen in diese Familie gehörenden Rezeptorkomplex handelt, so daß zum Auf¬ finden von Teilen des heteromeren Komplexes weitere dem Fachmann bekannte Methoden, wie z.B. PCR mit degenerierten Oligonukleotiden, verwendet werden können. Diese Methode ist z.B. auch bei den Aktivin- und TGF-ß-Rezeptoren Typ I angewen¬ det worden (Tsuchida et al . , Proc. Natl. Acad. Sei. USA 90 (1993) , 11242-11246; Attisano et al . , Cell 75 (1993) , 671-680; Franzen et al. , Cell 75 (1993) , 681-692) .The MP 121 receptors on cells are therefore also of interest in the context of the invention. To find receptors, different cell lines can first be tested for their binding behavior by radioactively labeled MP121 ( 15 J-MP121) with subsequent cross-linking. A cDNA library can subsequently be created from cells that bind MP121 in an expression vector (available from InVitrogen). Cells transfected with receptor cDNA can then be selected by binding radiolabelled MP121. These are methods known to the person skilled in the art, such as those used for the isolation of activin (Mathews, LS & Vale, WW, Cell 65 (1991), 973-982) and TGF-β receptors type II (Lin, HY et al. , Cell 68 (1992), 775-785) were used. In analogy to the known activin receptors, it can be assumed that the MP121 receptor is also a receptor complex belonging to this family, so that other methods known to the person skilled in the art, such as, for example, can be used to find parts of the heteromeric complex PCR with degenerate oligonucleotides can be used. This method is e.g. also used for type I activin and TGF-ß receptors (Tsuchida et al., Proc. Natl. Acad. Sci. USA 90 (1993), 11242-11246; Attisano et al., Cell 75 ( 1993), 671-680; Franzen et al., Cell 75 (1993), 681-692).
Schließlich ist ein weiterer Gegenstand der vorliegenden Erfindung ein Antikörper, der spezifisch an die erfindungs¬ gemäßen Proteine binden kann, oder ein derartiges Antikörper¬ fragment (z.B. Fab oder Fab') . Verfahren zur Herstellung eines solchen spezifischen Antikörpers oder Antikörperfragments gehören zum allgemeinen Fachwissen des Durchschnittfachmanns. Vorzugsweise ist ein solcher Antikörper ein monoklonaler Antikörper. Solche Antikörper oder Antikörperfragmente könnten sich auch für diagnostische Methoden eignen.Finally, another object of the present invention is an antibody that can bind specifically to the proteins according to the invention, or such an antibody fragment (e.g. Fab or Fab '). Methods for producing such a specific antibody or antibody fragment are well within the ordinary skill in the art. Such an antibody is preferably a monoclonal antibody. Such antibodies or antibody fragments could also be suitable for diagnostic methods.
Weiterhin soll die Erfindung durch die folgenden Beispiele veranschaulicht werden.The following examples further illustrate the invention.
Beispiel 1 Isolierung von MP121Example 1 Isolation of MP121
1.1 Gesamt RNA wurde aus menschlichem Lebergewebe (40 jähriger Mann) nach der Methode von Chirgwin et al. (Biochemistry, 18, 5294-5299 (1979)) isoliert. Poly (A+) -RNA wurde aus der Gesamt- RNA durch Oligo (dT) -Chromatographie gemäß den Vorschriften des Herstellers (Stratagene Poly (A) Quick-Säulen) abgetrennt.1.1 Total RNA was obtained from human liver tissue (40-year-old man) using the Chirgwin et al. (Biochemistry, 18, 5294-5299 (1979)). Poly (A +) RNA was separated from the total RNA by oligo (dT) chromatography according to the manufacturer's instructions (Stratagene Poly (A) Quick columns).
1.2 Für die reverse Transkriptionsreaktion wurden 1 bis 2 , 5 μg Poly (A+) -RNA für 5 Minuten auf 65°C erhitzt und schnell auf Eis abgekühlt. Das Reaktionsgemisch enthielt 27 U RNA-Guard (Pharmacia) , 2,5 μg Oligo (dT)12-18 (Pharmacia) , 5 x Puffer (250 mmol/1 Tris/HCl pH 8,5, 50 mmol/1 MgCl2, 50 mmol/1 DTT, 5 mmol/1 von jedem dNTP, 600 mmol/1 KC1) und 20 U AMV reverse Transcriptase (Boehringer Mannheim) pro μg Poly (A+) -RNA. Das Reaktionsgemisch (25 μl) wurde 2 Stunden lang bei 42°C inku¬ biert. Der cDNA Pool wurde bei -20°C aufbewahrt. 1.3 Die in Figur 2 gezeigten Deoxynukleotidprimer OD und OID wurden auf einem automatischen DNA-Synthesizer (Biosearch) hergestellt. Die Reinigung erfolgte durch denaturierende Polyacrylamidgelelektophorese und Isolierung der Hauptbande aus dem Gel durch Isotachophorese. Die Oligonukleotide wurden durch Vergleich der Nukleinsäuresequenzen von bekannten Mitgliedern der TGF-ß-Familie und Auswahl von Regionen mit hoher Kon¬ servierung entworfen. Ein Vergleich dieser Region ist in Figur 2 gezeigt. Zur Erleichterung der Klonierung enthielten beide Oligonukleotide Eco Rl-Schnittstellen und OD enthielt zusätz¬ lich eine Nco I-Restriktionsschnittstelle an seinem 5' -Termi¬ nus.1.2 For the reverse transcription reaction, 1 to 2.5 μg of poly (A +) RNA were heated to 65 ° C. for 5 minutes and quickly cooled on ice. The reaction mixture contained 27 U RNA-Guard (Pharmacia), 2.5 μg oligo (dT) 12-18 (Pharmacia), 5 x buffer (250 mmol / 1 Tris / HCl pH 8.5, 50 mmol / 1 MgCl 2 , 50 mmol / 1 DTT, 5 mmol / 1 of each dNTP, 600 mmol / 1 KC1) and 20 U AMV reverse transcriptase (Boehringer Mannheim) per μg poly (A +) RNA. The reaction mixture (25 μl) was incubated at 42 ° C. for 2 hours. The cDNA pool was kept at -20 ° C. 1.3 The deoxynucleotide primers OD and OID shown in FIG. 2 were produced on an automatic DNA synthesizer (biosearch). The purification was carried out by denaturing polyacrylamide gel electophoresis and isolation of the main band from the gel by isotachophoresis. The oligonucleotides were designed by comparing the nucleic acid sequences of known members of the TGF-ß family and selecting regions with high conservation. A comparison of this region is shown in Figure 2. To facilitate the cloning, both oligonucleotides contained Eco R1 sites and OD additionally contained an Nco I restriction site at its 5 'terminus.
1.4 Bei der PCR-Reaktion wurde 20 ng Poly (A+) -RNA entspre¬ chende cDNA (siehe 1.2) als Ausgangsmaterial verwendet. Die Reaktion wurde in einem Volumen von 50 μl durchgeführt und enthielt 1 x PCR-Puffer (16,6 mmol/1 (NH4)2S04, 67 mmol/1 Tris/HCl pH 8,8, 2 mmol/1 MgCl2, 6,7 μmol/1 EDTA, 10 πvmol/1 ß- Mercaptoethanol, 170 μg/ml Rinderserumalbumin (Gibco) , 200 μmol/1 von jedem dNTP (Pharmacia) , 30 pmol von jedem Oligonu- kleotid (OD und OID) und 1,5 U Taq-Polymerase (AmpliTaq, Perkin Eimer Cetus) . Das Reaktionsgemisch wurde mit Paraffin über¬ schichtet und es wurden 40 PCR-Zyklen durchgeführt. Die Produkte der PCR-Reaktion wurden durch Phenol/Chloroform- Extraktion gereinigt und durch Ethanolpräzipitation konzen¬ triert.1.4 20 ng of poly (A +) RNA corresponding cDNA (see 1.2) was used as starting material in the PCR reaction. The reaction was carried out in a volume of 50 μl and contained 1 × PCR buffer (16.6 mmol / 1 (NH 4 ) 2 SO 4 , 67 mmol / 1 Tris / HCl pH 8.8, 2 mmol / 1 MgCl 2 , 6.7 μmol / 1 EDTA, 10 πvmol / 1 ß-mercaptoethanol, 170 μg / ml bovine serum albumin (Gibco), 200 μmol / 1 of each dNTP (Pharmacia), 30 pmol of each oligonucleotide (OD and OID) and 1.5 U Taq polymerase (AmpliTaq, Perkin Elmer Cetus). The reaction mixture was coated with paraffin and 40 PCR cycles were carried out. The products of the PCR reaction were purified by phenol / chloroform extraction and concentrated by ethanol precipitation ¬ trated.
1.5 Die Hälfte der PCR-Reaktionsprodukte wurde mit den Restriktionsenzymen SphI (Pharmacia) und AlwNI (Biolabs) entsprechend den Vorschriften des Herstellers gespalten. Die zweite Hälfte wurde in einer Serie von Reaktionen mit Ava I (BRL) , AlwN I (Biolabs) und Tfi I (Biolabs) geschnitten. Die1.5 Half of the PCR reaction products were cleaved with the restriction enzymes SphI (Pharmacia) and AlwNI (Biolabs) according to the manufacturer's instructions. The second half was cut in a series of reactions with Ava I (BRL), AlwN I (Biolabs) and Tfi I (Biolabs). The
Restriktionen wurden in 100 μl mit 8 U Enzym über 2 bis 12 Stunden bei 37°C durchgeführt (außer bei Tfi I bei 65°C) .Restrictions were carried out in 100 μl with 8 U enzyme at 37 ° C. for 2 to 12 hours (except for Tfi I at 65 ° C.).
1.6 Die Produkte der Restriktionεspaltung wurden durch Agarosegelelektrophorese fraktioniert. Nach Anfärbung mit Ethidiumbromid wurden nicht gespaltene Amplifikationsprodukte aus dem Gel herausgeschnitten und durch Phenolextraktion isoliert. Die erhaltene DNA wurde anschließend zweimal durch Phenol/Chloroform-Extraktion gereinigt.1.6 The products of the restriction cleavage were fractionated by agarose gel electrophoresis. After staining with Ethidium bromide, uncleaved amplification products were cut out of the gel and isolated by phenol extraction. The DNA obtained was then purified twice by phenol / chloroform extraction.
1.7 Nach Ethanolpräzipitation wurde ein Viertel oder ein Fünftel der isolierten DNA reamplifiziert, wobei die gleichen Bedingungen wie für die primäre Amplifikation verwendet wurden, außer daß die Anzahl der Zyklen auf 13 verringert wurde. Die Reamplifikationsprodukte wurden gereinigt, mit den gleichen Enzymen wie oben geschnitten und die ungeschnittenen Produkte wurden, wie oben für die Amplifizierungsprodukte erläutert, aus Agarosegelen isoliert. Der Reamplifizierungsschritt wurde wiederholt.1.7 After ethanol precipitation, a quarter or a fifth of the isolated DNA was reamplified using the same conditions as for the primary amplification, except that the number of cycles was reduced to 13. The reamplification products were purified, cut with the same enzymes as above, and the uncut products were isolated from agarose gels as explained above for the amplification products. The reamplification step was repeated.
1.8 Nach der letzten Isolierung aus dem Gel wurden die Amplifikationsprodukte durch 4 U Eco RI (Pharmacia) unter den vom Hersteller empfohlenen Bedingungen gespalten. Ein Viertel des Restriktionsgemisches wurde in den mit Eco RI gespaltenen Vektor pBluescript SK+ (Stratagene) ligiert. Nach Ligation wurden 24 Klone jeder Enzymkombination durch Sequenzieren weiteranalysiert. Der Ansatz, der mit AlwN I und Sph I ge¬ schnitten wurde, enthielt keine neuen Sequenzen, nur BMP6 und Inhibin ßA Sequenzen. 19 identische neue Sequenzen, MP121 genannt, wurden in den mit Ava I, AlwN I und Tfi I geschnitte¬ nen Ansätzen gefunden. Diese Plasmide wurden pSK-MP121 (OD/OID) genannt. Eine Sequenz unterschied sich von dieser hauptsächlich gefundenen Sequenz an zwei Nukleotiden. Die Ligation und Transformation in E.coli wurde wie in Sambrook et al. , Molecu- lar cloning: A laboratory manual (1989) beschrieben durch¬ geführt.1.8 After the last isolation from the gel, the amplification products were cleaved by 4 U Eco RI (Pharmacia) under the conditions recommended by the manufacturer. A quarter of the restriction mixture was ligated into the vector pBluescript SK + (Stratagene) digested with Eco RI. After ligation, 24 clones of each enzyme combination were further analyzed by sequencing. The approach, which was cut with AlwN I and Sph I, contained no new sequences, only BMP6 and inhibin ßA sequences. 19 identical new sequences, called MP121, were found in the approaches cut with Ava I, AlwN I and Tfi I. These plasmids were called pSK-MP121 (OD / OID). One sequence differed from this mainly found sequence on two nucleotides. The ligation and transformation in E. coli was carried out as in Sambrook et al. , Molecular cloning: A laboratory manual (1989).
Der Klon wurde zum 3'-Ende der cDNA nach der ausführlich von Frohmann (veröffentlicht von Perkin-Elmer Corp., Amplifica- tions, 5, 11-15 (1990)) beschriebenen Methode vervollständigt. Dieselbe Leber-mRNA, welche zur Isolation des ersten MP121 Fragmentes benutzt wurde, wurde, wie oben beschrieben, revers transcribiert unter Verwendung von Oligo dT (16mer) verbunden mit dem Adapterprimer (AGAATTCGCATGCCATGGTCGACGAAGC -T16) . Die Ampl i f ikat ion wurde mit dem Adapterprimer (AGAATTCGCATGCCATGGTCGACG) und einem internen Primer (GGCTACGCCATGAACTTCTGCATA) , nach der MP121 Sequenz hergestellt, durchgeführt . Die Amplifikationsprodukte wurden mit einem weiteren internen Primer (ACATAGCAGGCATGCCTGGTATTG) , hergestellt nach der MP-121 Sequenz, und dem Adapterprimer reamplifiziert. Die Reamplifikationsprodukte wurden nach Restriktion mit Sph I in den ebenso geschnittenen Vektor pT7/T3 U19 (Pharmacia) kloniert und sequenziert. Die Klone wurden durch ihre Sequenzüberlappung mit dem bereits bekannten Teil der MP121-Sequenz charakterisiert. Ein Klon, genannt pl21Lt 3' MP13 , wurde benutzt, um ein Nco I (stumpf gemacht mit T4 Polymerase) /Sph I Fragment zu isolieren. Dieses Fragment wurde in einen der oben erwähnten pSK-MP121 (OD/OID) Vektoren kloniert, dessen OD-Primer Sequenz zum T7 Primer der pSK Multiple Cloning Site orientiert war. Dazu wurde der Vektor mit SphI und Smal restringiert. Das Konstrukt wurde pMP121DFus6 genannt. Es beinhaltet die MP121 Sequenz von Position 922 bis 1360 wie in SEQ ID NO.l gezeigt.The clone was completed at the 3 'end of the cDNA according to the method described in detail by Frohmann (published by Perkin-Elmer Corp., Amplifications, 5, 11-15 (1990)). The same liver mRNA used to isolate the first MP121 fragment was reversed as described above transcribed using Oligo dT (16mer) connected to the adapter primer (AGAATTCGCATGCCATGGTCGACGAAGC -T 16 ). The amplification was carried out with the adapter primer (AGAATTCGCATGCCATGGTCGACG) and an internal primer (GGCTACGCCATGAACTTCTGCATA), prepared according to the MP121 sequence. The amplification products were reamplified with a further internal primer (ACATAGCAGGCATGCCTGGTATTG), produced according to the MP-121 sequence, and the adapter primer. After restriction with Sph I, the reamplification products were cloned into the vector pT7 / T3 U19 (Pharmacia) which had also been cut and sequenced. The clones were characterized by their sequence overlap with the already known part of the MP121 sequence. A clone called pl21Lt 3 'MP13 was used to isolate an Nco I (blunted with T4 polymerase) / Sph I fragment. This fragment was cloned into one of the pSK-MP121 (OD / OID) vectors mentioned above, the OD primer sequence of which was oriented to the T7 primer of the pSK multiple cloning site. For this, the vector was restricted with SphI and Smal. The construct was named pMP121DFus6. It contains the MP121 sequence from position 922 to 1360 as shown in SEQ ID NO.1.
1.9 Ein Dde I Fragment von pMP121DFus6, welches von Position 931 bis 1304 in SEQ ID NO.l reicht, wurde zum Screenen einer humanen Leber cDNA Library (Clontech, # HL3006b, Lot 36223) verwendet, wie es ausführlich bei Ausubel et al. (Current Protocols in Molecular Biology, veröffentlicht von Greene Publishing Associates und Wiley-Interscience (1989)) beschieben ist. Aus 8,1 x 105 Phagen wurden 24 Mischplaques gepickt und vereinzelt. Daraus wurden 10 Klone, die mit PCR unter Ver¬ wendung der Primer L02 (ACATAGCAGGCATGCCTGGTATTG) und LOH (CTGCAGCTGTGTTGGCCTTGAGA) aus dem Dde I Fragment, ein positives Signal ergaben, ausgewählt und vereinzelt. Die cDNA wurde über eine EcoR I-Restriktion aus den Phagen isoliert und in den ebenfalls mit Eco RI gespaltenen pBluescript SK-Vektor klo¬ niert. Eine Sequenzierung eines der resultierenden Plasmide, SK121L9.1, zeigte, daß das Startcodon an Position 128 von SEQ ID NO.l beginnt, da drei Stoppcodons in-frame vor diesem Startcodon an Position 62, 77 und 92 liegen. Der Start des reifen MP121 liegt bei Position 836 von SEQ ID NO.l, legt man die Sequenzanalogie zu anderen TGF-ß Proteinen zu Grunde, was der Aminosäure 237 in SEQ NO.2 entspricht. Das Stoppcodon beginnt an Position 1184 der SEQ ID NO.l.1.9 A Dde I fragment from pMP121DFus6, which extends from position 931 to 1304 in SEQ ID NO. 1, was used to screen a human liver cDNA library (Clontech, # HL3006b, lot 36223), as described in detail by Ausubel et al. (Current Protocols in Molecular Biology, published by Greene Publishing Associates and Wiley-Interscience (1989)). 24 mixed plaques were picked from 8.1 x 10 5 phages and separated. From this, 10 clones which gave a positive signal with PCR using primers L02 (ACATAGCAGGCATGCCTGGTATTG) and LOH (CTGCAGCTGTGTTGGCCTTGAGA) were selected and separated. The cDNA was isolated from the phages via an EcoRI restriction and cloned into the pBluescript SK vector which had also been cleaved with EcoRI. Sequencing of one of the resulting plasmids, SK121L9.1, showed that the start codon begins at position 128 of SEQ ID NO.1 because three stop codons are in-frame in front of this start codon at positions 62, 77 and 92. The start of the mature MP121 is at position 836 of SEQ ID NO.1. If one bases the sequence analogy on other TGF-ß proteins, which corresponds to amino acid 237 in SEQ NO.2. The stop codon begins at position 1184 of SEQ ID NO.l.
Das Plasmid SK121L9.1 wurde unter der Hinterlegungsnummer 9177 bei der DSM am 26.4.94 hinterlegt.The plasmid SK121L9.1 was deposited with the DSM on April 26, 1994 under the accession number 9177.
1.10 Isolation der MP121 cDNA und genomischer DNA aus Maus: Die SequenzInformationen aus der humanen MP121 Sequenz wurden zur Isolation der MP121 Sequenz aus der Maus genutzt. Die dazu angewendeten Methoden sind alle dem Fachmann bekannt und z.B. in Current Protocols in Molecular Biology (Ausubel et al. , Greene Publishing Associates and Wiley-Interscience, Wiley & Sons, 1987-1995) oder bei Molecular Cloning (Sambrook et al., second edition, Cold Spring Harbour Laboratory Press 1989) beschrieben.1.10 Isolation of the MP121 cDNA and Genomic DNA from Mouse: The sequence information from the human MP121 sequence was used to isolate the MP121 sequence from the mouse. The methods used for this are all known to the person skilled in the art and e.g. in Current Protocols in Molecular Biology (Ausubel et al., Greene Publishing Associates and Wiley-Interscience, Wiley & Sons, 1987-1995) or in Molecular Cloning (Sambrook et al., second edition, Cold Spring Harbor Laboratory Press 1989).
Zunächst wurden die Primer ACGAATTCCGACGAGGCATCGACTGC und GCGTCGACTACCATGTCAGGTATGTC von der humanen MP121 Sequenz mit zusätzlichen Restriktionsschnittstellen am 5'Ende (EcoR I bzw. Sal I) synthetisiert. Diese Primer wurden auf genomischer Maus DNA zur Amplifikation eingesetzt. Das entstehende 0.35 kb Fragment wurde in den " Bluescript Vektor (Stratagene) subkloniert und als radioaktive Sonde eingesetzt. Es wurde sowohl eine λ-Bank mit genomischer Maus DNA als auch eine Bank mit cDNA nach Standardmethoden gescreent. Die cDNA wurde aus RNA, die aus Mausleber isoliert war, synthetisiert und mit EcoR I/Not I-linkern versehen in λgtlO kloniert.First, the primers ACGAATTCCGACGAGGCATCGACTGC and GCGTCGACTACCATGTCAGGTATGTC were synthesized from the human MP121 sequence with additional restriction sites at the 5 'end (EcoR I or Sal I). These primers were used for amplification on mouse genomic DNA. The resulting 0.35 kb fragment was subcloned into the " Bluescript vector (Stratagene) and used as a radioactive probe. Both a λ bank with genomic mouse DNA and a bank with cDNA were screened according to standard methods. The cDNA was derived from RNA derived from Mouse liver was isolated, synthesized and cloned in λgtlO provided with EcoR I / Not I linkers.
Sowohl aus der genomischen als auch aus der cDNA Bank wurden MP121 Klone isoliert. Eine die gesamte codierende Sequenz enthaltende cDNA wurde in die EcoR I Schnittstelle des Vektors Bluescript SK (Stratagene) subkloniert und das resultierende Plasmid SKMP121 Maus bei der DSM am 10.05.1995 hinterlegt (DSM 9964) . Die vollständige Sequenzierung ergab die in SEQ ID NO.3 gezeigte Sequenz. Das Startcodon beginnt an Position 131 in SEQ ID NO.3 und endet mit dem Stoppcodon beginnend an der Position 1187. Das aus der Sequenz abgeleitete Protein ist in SEQ ID NO.4 gezeigt.MP121 clones were isolated from both the genomic and the cDNA library. A cDNA containing the entire coding sequence was subcloned into the EcoRI interface of the vector Bluescript SK (Stratagene) and the resulting plasmid SKMP121 mouse was deposited with the DSM on May 10, 1995 (DSM 9964). Complete sequencing gave the sequence shown in SEQ ID NO.3. The start codon begins at position 131 in SEQ ID NO.3 and ends with the stop codon starting at position 1187. The protein derived from the sequence is shown in SEQ ID NO.4.
Subklonierung und Analyse der MP121 enthaltenden Klone aus der genomischen Bank ergab, daß die MP121 Sequenz im Propeptidanteil ein Intron von ca. 5,5 kb enthält. Dieses Intron befindet sich zwischen den Positionen 446 und 447 in SEQ ID NO.3. Die Exon/Intron Übergänge sind in SEQ ID NO.5 gezeigt.Subcloning and analysis of the clones from the genomic library containing MP121 showed that the MP121 sequence contains an intron of approximately 5.5 kb in the propeptide portion. This intron is located between positions 446 and 447 in SEQ ID NO.3. The exon / intron junctions are shown in SEQ ID NO.5.
Beispiel 2 Expression von MP121Example 2 Expression of MP121
Die Expression von MP121 ist sowohl in eukaryontisehen als auch in prokaryontischen Systemen möglich.The expression of MP121 is possible in both eukaryotic and prokaryotic systems.
Für die Expression in Prokaryonten wurde nur der reife Anteil von MP121 verwendet. Nach Aufreinigung kann das in E.coli als Monomer exprimierte reife MP121 Protein dann zu einem Dimer zurückgefalten werden. Um die Aufreinigung des MP121 zu vereinfachen, können an den N-Terminus des reifen Proteins zusätzlich 6 Histidine gehängt werden, die durch Bindung an Nickelchelat-Säulen die Aufreinigung des Proteins erleich¬ tern.Only the mature portion of MP121 was used for expression in prokaryotes. After purification, the mature MP121 protein expressed as a monomer in E. coli can then be folded back into a dimer. In order to simplify the purification of the MP121, 6 histidines can additionally be attached to the N-terminus of the mature protein, which facilitate the purification of the protein by binding to nickel chelate columns.
Beispielhaft wurde der reife Anteil von humanem MP121 (Aminosäure 237 bis 352 in SEQ ID NO.2) mit 13 zusätzlichen Aminosäuren einschließlich 6 Histidinen am N-Terminus (MHHHHHHKLEFAM) in dem prokaryontischen Vektor pBP4 exprimiert. Dieser Vektor ist ein pBR322 Derivat mit Tetracyclinresistenz der zusätzlich den T7 Promoter aus dem pBluescript II SK Plasmid (Stratagene) enthält. Weiterhin enthält der Vektor nach dem T7-Promoter eine ribosomale Bindestelle und ein Startcodon gefolgt von 6 Codons für Histidin. Hinter mehreren singulären Restriktionsschnitt¬ stellen wie Eco RI, Xho I, Sma I und Apa I für die Insertion von Inserts sowie Stopcodons in allen drei Leserahmen folgt ein Terminator (T0) . Zum Erhalt der cDNA für den reifen Anteil von MP121 wurde eine PCR mit den beiden Oligonukleoti- den GAATTCGCCATGGGCATCGACTGCCAAGGAGG undAs an example, the mature portion of human MP121 (amino acids 237 to 352 in SEQ ID NO.2) with 13 additional amino acids including 6 histidines at the N-terminus (MHHHHHHKLEFAM) was expressed in the prokaryotic vector pBP4. This vector is a pBR322 derivative with tetracycline resistance which additionally contains the T7 promoter from the pBluescript II SK plasmid (Stratagene). Furthermore, the vector after the T7 promoter contains a ribosomal binding site and a start codon followed by 6 codons for Histidine. A terminator (T0) follows behind several singular restriction interfaces such as Eco RI, Xho I, Sma I and Apa I for the insertion of inserts and stop codons in all three reading frames. To obtain the cDNA for the mature part of MP121, a PCR with the two oligonucleotides GAATTCGCCATGGGCATCGACTGCCAAGGAGG and
CCGCTCGAGAAGCTTCAACTGCACCCACAGGC auf dem Plasmid SK121L9.1 (DSM Hinterlegungsnummer: 9177) durchgeführt. Beide Oligo¬ nukleotide enthalten an den Enden hinzugefügte Restriktions- schnittstellen (Eco RI und Nco I bzw. Xho I und Hind III) . Das resultierende 377 bp Fragment wurde stumpfendig in den mit Eco RV restringierten Vektor pBluescript II SK (Stra¬ tagene) zwischenkloniert. Ein Klon mit der Orientierung des 5' Endes von MP121 zum T7-Promoter wurde mit Eco RI restringiert und das resultierende Insert (0.38 kb) in den ebenfalls mit Eco RI restringierten pBP4 Vektor kloniert. Die richtige Orientierung des Inserts beim resultierenden Plasmid p-BP4MP121His wurde durch Restriktionsanalyse und Sequenzie¬ rung festgestellt. Das Plasmid pBP4MP121His wurde am 30.1.1995 bei der DSM (Hinterlegungsnummer: 9704) hinterlegt.CCGCTCGAGAAGCTTCAACTGCACCCACAGGC on plasmid SK121L9.1 (DSM accession number: 9177). Both oligonucleotides contain restriction sites added at the ends (Eco RI and Nco I or Xho I and Hind III). The resulting 377 bp fragment was blunt-end cloned into the vector pBluescript II SK (Stra¬ tagene) restricted with Eco RV. A clone with the orientation of the 5 'end of MP121 to the T7 promoter was restricted with Eco RI and the resulting insert (0.38 kb) was cloned into the pBP4 vector which was also restricted with Eco RI. The correct orientation of the insert in the resulting plasmid p-BP4MP121His was determined by restriction analysis and sequencing. The plasmid pBP4MP121His was deposited with the DSM on January 30, 1995 (accession number: 9704).
Die Expression von MP121 Protein kann durch gleichzeitige Bereitstellung von T7-RNA Polymerase erfolgen. Die T7-RNA Polymerase kann über verschiedene Methoden bereitgestellt werden, wie z.B. ein zweites Plasmid mit einem Gen für T7 RNA Polymerase oder durch Infektion mit Phagen, die für die T7 RNA Polymerase codieren oder aber durch spezielle Bakterien¬ stämme, die das Gen für T7 RNA Polymerase integriert haben. Unter Verwendung des Bakterienstammes BL21 (DE3)pLysS (Nova¬ gen, #69451-1) und Induktion der T7 RNA Polymerase-Expression nach Herstellerangaben mit IPTG, wird das reife MP121 Protein mit His-Tag (MP121His) in Einschlußkörpern gebildet. Das Protein zeigt in SDS-Polyacrylamid-Gelen (15%) ein apparentes Molekulargewicht von knapp 16 kD (theoretisches Molekularge¬ wicht: 14.2 kD) wie es representativ im Westernblot der Figur 3 gezeigt ist. Die mit pBP4 transformierten Bakterien als Kontrollen zeigen jeweils keine Anfärbung spezifischer Ban- den. Aufgrund des His-Tag kann dieses Protein über Nickel- chelatbildende Säulen wie z.B. beschrieben in Hochuli et al. (BIO/Technology Vol. 6, 1321-1325 (1988)) gereinigt werden. Eine zusätzliche Reinigung ist möglich über eine Reversed Phase HPLC. Es wurde einer Reversed Phase Säule (Nucleosil 300-7C4 von Macherey-Nagel, Art. 715023) mit einer Flußrate von 2 ml/min und einem Acetonitrilgradienten in 0.1 % TFA von 0 bis 90% in 100 min verwendet. Unter diesen Bedingungen eluiert MP121His ab ca. 40% Acetonitril.MP121 protein can be expressed by simultaneously providing T7 RNA polymerase. The T7-RNA polymerase can be provided by various methods, such as a second plasmid with a gene for T7 RNA polymerase or by infection with phages which code for the T7 RNA polymerase or by special bacterial strains which carry the gene for T7 Have integrated RNA polymerase. Using the bacterial strain BL21 (DE3) pLysS (Nova¬ gen, # 69451-1) and inducing T7 RNA polymerase expression according to the manufacturer's instructions with IPTG, the mature MP121 protein with His tag (MP121His) is formed in inclusion bodies. The protein in SDS-polyacrylamide gels (15%) has an apparent molecular weight of almost 16 kD (theoretical molecular weight: 14.2 kD), as is shown representatively in the Western blot of FIG. 3. The bacteria transformed with pBP4 as controls each show no staining of specific bacteria. the. Because of the His tag, this protein can be obtained via nickel chelating columns as described, for example, in Hochuli et al. (BIO / Technology Vol. 6, 1321-1325 (1988)). Additional cleaning is possible using a reversed phase HPLC. A reversed phase column (Nucleosil 300-7C4 from Macherey-Nagel, Art. 715023) with a flow rate of 2 ml / min and an acetonitrile gradient in 0.1% TFA from 0 to 90% in 100 min was used. Under these conditions, MP121His elutes from approx. 40% acetonitrile.
Der Nachweis, daß es sich um humanes MP121 Protein handelt, wurde jeweils über Western blot Analyse mit MP121 spezifischen Antikörpern geführt. Polyklonale Antikörper gegen MP121 wurden sowohl in Hühnern als auch in Kaninchen erzeugt. Zum Erhalt des Antigens für die Immunisierung wurde ein Teil des reifen Anteils von MP121 (Aminosäure 260 bis 352 in SEQ ID NO.2) mit den ersten 98 Aminosäuren der Polymerase des MS2-Bakteriophagen fusioniert und in E.coli exprimiert. Nach Isolation der Einschlußkörper wurde das Fusionsprotein (MS2-MP121) auf Polyacrylamid-Gelen separiert und nach Kup¬ ferfärbung durch Elektroelution (Tessmer,U. & Dernick,R., IBL (1990) 8-13) für die Immunisierung isoliert. Mit Antikörpern sowohl aus Hühnern als auch aus Kaninchen ist es möglich, spezifisch Expression von MP121 nachzuweisen. Für den schema¬ tisierten Western blot in Figur 3 wurden Hühner-Antikörper verwendet, die über PEG-Präzipitation (Thalley B.S. u. Car- roll, S.B., BIO/Technology Vol. 8, 934-938 (1990) ) und über Membrangebundenes Antigen (Fusionsprotein (MS2-MP121) ) (18.17 in Sambrook et al. Molecular Cloning, second edition, Cold Spring Harbor Laboratory Press 1989) weitergehend aufgerei¬ nigt waren. Als zweiter Antikörper wurde Anti-Chicken IgG mit gekoppelter alkalischer Phosphatase (Sigma A9171) eingesetzt. Die Detektion erfolgte mit dem Tropix Western-Light Protein Detection Kit (Serva #WL10RC) nach Herstellerangaben.The proof that it is human MP121 protein was carried out in each case via Western blot analysis with MP121-specific antibodies. Polyclonal antibodies to MP121 were raised in both chickens and rabbits. To obtain the antigen for the immunization, part of the mature portion of MP121 (amino acid 260 to 352 in SEQ ID NO.2) was fused with the first 98 amino acids of the polymerase of the MS2 bacteriophage and expressed in E. coli. After isolation of the inclusion bodies, the fusion protein (MS2-MP121) was separated on polyacrylamide gels and after copper staining by electroelution (Tessmer, U. & Dernick, R., IBL (1990) 8-13) for the immunization. Antibodies from both chickens and rabbits make it possible to specifically detect expression of MP121. For the schematic western blot in FIG. 3, chicken antibodies were used which via PEG precipitation (Thalley BS and Carroll, SB, BIO / Technology Vol. 8, 934-938 (1990)) and via membrane-bound antigen (Fusion protein (MS2-MP121)) (18.17 in Sambrook et al. Molecular Cloning, second edition, Cold Spring Harbor Laboratory Press 1989). Anti-Chicken IgG with coupled alkaline phosphatase (Sigma A9171) was used as the second antibody. Detection was carried out using the Tropix Western-Light Protein Detection Kit (Serva # WL10RC) according to the manufacturer's instructions.
Um biologisch aktives Material zu erhalten, kann das in E.coli exprimierte und aufgereinigte monomere MP121 zu einem dimeren MP121 zurückgefalten werden. Dies kann nach Methoden wie z.B. beschrieben von Jaenicke, R. & Rudolph, R. (Protein structure, ed. Creighton, T.E., IRL Press, chapter 9) erfol¬ gen.To obtain biologically active material, the monomeric MP121 expressed and purified in E. coli can be combined into one dimeric MP121 can be folded back. This can be done using methods such as those described by Jaenicke, R. & Rudolph, R. (Protein structure, ed. Creighton, TE, IRL Press, chapter 9).
Für die Expression in eukaryontisehen Zellen wurde das Vaccinia Viren Expressionssystem verwendet, wie es ausführ¬ lich und für den Fachmann nacharbeitbar in den Current Proto¬ cols in Molecular Biology (Ausubel et al. , Greene Publishing Associates and Wiley-Interscience, Wiley & Sons) , im folgen¬ den abgekürzt mit CP, unter Chapter 16 Unit 16.15-16.18 be¬ schrieben ist. Das System beruht darauf, daß Fremd-DNA unter Verwendung bestimmter Vektoren durch homologe Rekombination in das Vaccinia Virus Genoms integriert werden kann. Zu diesem Zweck enthält der verwendete Vektor das TK (Thymidin- kinase) Gen aus dem Vaccinia Genom. Um eine Selektion auf rekombinante Viren zu ermöglichen, enthält der Vektor weiter¬ hin das E.coli Xanthin-Guanin-Phosphoribosyl-Transferase Gen (gpt) (Falkner, F.G. & Moss, B., J. of Virol. 62 (1988), 1849-1854) . In diesen Vektor wurde die cDNA mit dem gesamten codierenden Bereich für MP121 kloniert.For the expression in eukaryotic cells, the vaccinia virus expression system was used, as described in detail in the Current Protocols in Molecular Biology (Ausubel et al., Greene Publishing Associates and Wiley-Interscience, Wiley & Sons) , hereinafter abbreviated to CP, is described under Chapter 16 Unit 16.15-16.18. The system is based on the fact that foreign DNA can be integrated into the vaccinia virus genome using certain vectors by homologous recombination. For this purpose, the vector used contains the TK (thymidine kinase) gene from the vaccinia genome. To enable selection for recombinant viruses, the vector further contains the E. coli xanthine guanine phosphoribosyl transferase gene (gpt) (Falkner, FG & Moss, B., J. of Virol. 62 (1988), 1849-1854). The cDNA with the entire coding region for MP121 was cloned into this vector.
Um die 5' und 3' nicht translatierten Bereiche aus dem ur¬ sprünglichen Plasmid SK121L9.1 (DSM, Hinterlegungsnummer: 9177) zu verkürzen und an den Enden singuläre Restriktions¬ schnittstellen einzufügen, waren PCR Reaktionen und Zwischen- klonierungen notwendig. Alle' PCR Reaktionen wurden mit dem Plasmid SK121L9.1 (DSM Hinterlegungsnummer: 9177) durchge¬ führt. Zur Verkürzung des 5' nicht translatierten Endes wurde der Primer CCCGGATCCGCTAGCACCATGACCTCCTCATTGCTTCTG mit einer eingefügten Barn HI und Nhel Restriktionsschnittstelle in einer PCR mit einem internen Primer (CCCTGTTGTCCTCTAGAAGTG) benutzt. Das gewonnene Fragment wurde in Bluescript SK (Stratagene) zwischenkloniert, sequenziert und auf Überein¬ stimmung mit der in SEQ ID NO.l gezeigten Sequenz überprüft. Für ein verkürztes 3' nicht translatiertes Ende wurde das Sph I/Eco RI Fragment (0.22 kb) aus dem Plasmid pBP4MP121His verwendet.In order to shorten the 5 'and 3' untranslated regions from the original plasmid SK121L9.1 (DSM, accession number: 9177) and to insert unique restriction interfaces at the ends, PCR reactions and intermediate cloning were necessary. All 'PCR reactions were performed with the plasmid SK121L9.1: leads durchge (DSM Deposit No. 9177). To shorten the 5 'untranslated end, the primer CCCGGATCCGCTAGCACCATGACCTCCTCATTGCTTCTG with an inserted Barn HI and Nhel restriction site was used in a PCR with an internal primer (CCCTGTTGTCCTCTAGAAGTG). The fragment obtained was intermediate cloned in Bluescript SK (Stratagene), sequenced and checked for agreement with the sequence shown in SEQ ID NO.1. For a shortened 3 'untranslated end, the Sph I / Eco RI fragment (0.22 kb) from the plasmid pBP4MP121His used.
Die beiden End-Fragmente von humanem MP121 wurden über interne Restriktionsschnitte (Xba I und Sph I) mit der fehlenden mittleren DNA Sequenz aus dem Plasmid SK121L9.1 (DSM Hinterlegungsnummer: 9177 ) nach Standardmethoden (Sambrook et al. Molecular Cloning, second edition, Cold Spring Harbor Laboratory Press 1989) verbunden. Die so erhaltene verkürzte cDNA mit dem vollständigen Leserahmen für MP121 (Nukleotid 128 bis Nukleotid 1184 in SEQ ID No.l) konnte über Ausnutzung der Restriktionsschnitte Barn HI und Eco RI in den ebenso geschnittenen Vektor pBPl kloniert werden. Das resultierende Plasmid pBPlMP121 wurde am 12.1.95 bei der DSM (Hinterlegungsnummer: 9665) hinterlegt.The two end fragments of human MP121 were cut via internal restriction cuts (Xba I and Sph I) with the missing middle DNA sequence from the plasmid SK121L9.1 (DSM deposit number: 9177) according to standard methods (Sambrook et al. Molecular Cloning, second edition, Cold Spring Harbor Laboratory Press 1989). The shortened cDNA thus obtained with the complete reading frame for MP121 (nucleotide 128 to nucleotide 1184 in SEQ ID No. 1) could be cloned into the vector pBPl, which had also been cut, by using the restriction sections Barn HI and Eco RI. The resulting plasmid pBPlMP121 was deposited on January 12, 1995 with the DSM (accession number: 9665).
Das Plasmid pBPlMP121 wurde für die Herstellung von rekom- binanten Vaccinia Viren eingesetzt. Dazu wurden zu 80 % kon- fluente 143B Zellen (HuTk-, ATCC CRL 8303) in 35 mm Kultur¬ schalen mit Vaccinia Wildtyp Virus in 1 ml PBS für 30 Minuten bei Raumtemperatur unter gelegentlichem Schütteln infiziert (1 Virus auf 10 Zellen) . Nach Absaugen des Überstandes und Zugabe von 2 ml Kulturmedium (MEM, Gibco BRL #041-01095 mit 1:500 verdünntem Penicillin und Streptomycin Gibco BRL #043-05140) wurde für 2 Stunden bei 37°C inkubiert. Das Medium wurde anschließend entfernt und die Transformation dieser Zellen mit 100 ng pBPlMP121, 2 μg Träger DNA (Kalbs- thymus, Ultraschall behandelt, Boehringer Mannheim #104175) und 10 μl Lipofektin (Gibco BRL #18292-011) in 1 ml MEM für ca. 15 h bei 37°C erreicht. Nach Zugabe von 1 ml MEM mit 20% FCS (Sigma #F-7524) wurde für weitere 24 Stunden bei 37°C inkubiert und die lysierten Zellen anschließend eingefroren.The plasmid pBPlMP121 was used for the production of recombinant vaccinia viruses. For this purpose, 80% confluent 143B cells (HuTk, ATCC CRL 8303) in 35 mm culture dishes were infected with vaccinia wild-type virus in 1 ml PBS for 30 minutes at room temperature with occasional shaking (1 virus per 10 cells). After aspirating the supernatant and adding 2 ml of culture medium (MEM, Gibco BRL # 041-01095 with penicillin diluted 1: 500 and streptomycin Gibco BRL # 043-05140), the mixture was incubated at 37 ° C. for 2 hours. The medium was then removed and the transformation of these cells with 100 ng pBPlMP121, 2 μg carrier DNA (calf thymus, treated with ultrasound, Boehringer Mannheim # 104175) and 10 μl lipofectin (Gibco BRL # 18292-011) in 1 ml MEM for approx 15 h at 37 ° C. After adding 1 ml of MEM with 20% FCS (Sigma # F-7524), the mixture was incubated for a further 24 hours at 37 ° C. and the lysed cells were then frozen.
Die gpt Selektion auf die Xanthin-Guanin-Phosphoribosyl- Transferase und Isolation und Amplifizierung einzelner rekom- binanter Viren erfolgte im wesentlichen wie in Unit 16.17 der CP beschrieben, mit dem Unterschied, daß RK13 Zellen (ATCC CCL 37) verwendet wurden.The gpt selection for the xanthine guanine phosphoribosyl transferase and the isolation and amplification of individual recombinant viruses was carried out essentially as in unit 16.17 of the CP described, with the difference that RK13 cells (ATCC CCL 37) were used.
Die Integration der MP121 cDNA in das Virus Genom wurde durch Dot blot Analyse (CP Unit 16.18) bestätigt. Ein rekombinantes Virus aus der Transfektion mit pBPMP121 sowie der Wildtyp Virus wurden für Expressionsanalysen in den Zelllinien 143BThe integration of the MP121 cDNA into the virus genome was confirmed by dot blot analysis (CP Unit 16.18). A recombinant virus from transfection with pBPMP121 and the wild-type virus were used for expression analyzes in the cell lines 143B
(HuTk-, ATCC CRL 8303, human) und NIH-3T3 (DSM ACC 59, swiss mouse embryo) eingesetzt. Die Zellen wurden nach den Angaben der Vertreiber kultiviert. Die konfluenten Zellen wurden mit der dreifachen Anzahl an Viren für 30 Minuten bei 37°C infi¬ ziert und anschließend das entsprechende Kulturmedium mit 10% FCS und Penicillin/Streptomycin (1:500, Gibco BRL #043-05140) zugefügt. Nach 6 Stunden bei 37°C wurde das Medium entfernt, die Zellen zweimal mit z.B. HBSS (Gibco BRL #14180-046) gewaschen und Produktionsmedium (MEM für HuTk- bzw. DMEM mit 4.5 g/1 Glucose und NEAA (Gibco BRL #11140-035) für NIH-3T3 jeweils versetzt mit Aprotinin (Fluka #10820, 50 U/ml) und Penicillin/Streptomycin) ohne FCS zugesetzt. Nach 20 bis 22 Stunden Produktion wurde der Zeilüberstand gesammelt. Die Analyse der Expression erfolgte durch Western blots nach Standardmethoden (CP Unit 10.8). Dafür wurden die Proteine aus 1 bis 3 ml Zellkulturüberstand durch Zugabe des äquiva¬ lenten Volumens an Aceton und Inkubation von mindestens einer Stunde auf Eis präzipitiert und abzentrif giert. Nach Re- suspension des Pellets in Auftragspuffer (7 M Harnstoff, 1 % SDS, 7 mM Natriumdihydrogenphosphat, 0,01 % Bromphenolblau und gegebenenfalls 1 % ß-Mercaptoethanol) erfolgte die Auf- trennung in 15%igen Polyacrylamidgelen. Als Markerproteine wurde ein vorgefärbter Protein-Molekulargewichtsstandard(HuTk-, ATCC CRL 8303, human) and NIH-3T3 (DSM ACC 59, swiss mouse embryo). The cells were cultivated according to the information provided by the distributors. The confluent cells were infected with three times the number of viruses for 30 minutes at 37 ° C. and then the corresponding culture medium with 10% FCS and penicillin / streptomycin (1: 500, Gibco BRL # 043-05140) was added. After 6 hours at 37 ° C the medium was removed, the cells were washed twice with e.g. HBSS (Gibco BRL # 14180-046) washed and production medium (MEM for HuTk or DMEM with 4.5 g / 1 glucose and NEAA (Gibco BRL # 11140-035) for NIH-3T3 each mixed with aprotinin (Fluka # 10820, 50 U / ml) and penicillin / streptomycin) added without FCS. After 20 to 22 hours of production, the cell supernatant was collected. Expression was analyzed by Western blots using standard methods (CP Unit 10.8). For this purpose, the proteins were precipitated from 1 to 3 ml of cell culture supernatant by adding the equivalent volume of acetone and incubating on ice for at least one hour and centrifuging. After the pellet had been resuspended in application buffer (7 M urea, 1% SDS, 7 mM sodium dihydrogen phosphate, 0.01% bromophenol blue and optionally 1% β-mercaptoethanol), it was separated in 15% polyacrylamide gels. A pre-stained protein molecular weight standard was used as the marker protein
(Gibco BRL #6041-020) eingesetzt. Der Transfer auf PVDF Membran (Immobilon #IPVH00010) und das Abblocken der Membran erfolgten nach Standardmethoden.(Gibco BRL # 6041-020). The transfer to PVDF membrane (Immobilon # IPVH00010) and the blocking of the membrane were carried out using standard methods.
Eine repräsentative schematisierte Zeichnung der Western blot Ergebnisse in Figur 3 zeigt, daß bei den mit rekombinanten Viren infizierten Zellen MP121 spezifische Banden auftreten. Die Expression von MP121 in NIH-3T3 Zellen führt zu einem sekretierten Protein mit einem im Gel unter nicht reduzieren¬ den Bedingungen erscheinenden Molekulargewicht von ungefähr 18 kD (erwartetes theoretisches Molekulargewicht: 25 kD) . Unter reduzierenden Bedingungen läuft das Protein bei unge¬ fähr 15 kD im Gel (erwartetes theoretisches Molekulargewicht: 12.5 kD) . Diese Ergebnisse zeigen, daß MP121 wie zu erwarten als dimeres reifes Protein exprimiert wird. Das relativ wenig verlangsamte Laufverhalten des dimeren MP121 Proteines gegen¬ über dem monomeren MP121 Protein ist wahrscheinlich mit einer globulären Struktur zu begründen. Die Prozessierung des Vor¬ lauferproteines zum reifen Protein konnte auch in HuTK-Zellen gezeigt werden. Bei mit Wildtyp Viren (ohne integrierte Fremd-DNA) infizierten Zellen (HuTK- oder NIH-3T3) traten keine Banden im Western blot auf.A representative schematic drawing of the Western blot results in FIG. 3 shows that MP121-specific bands occur in the cells infected with recombinant viruses. The expression of MP121 in NIH-3T3 cells leads to a secreted protein with a molecular weight of approximately 18 kD appearing in the gel under non-reducing conditions (expected theoretical molecular weight: 25 kD). Under reducing conditions, the protein runs in the gel at approximately 15 kD (expected theoretical molecular weight: 12.5 kD). These results show that, as expected, MP121 is expressed as a dimeric mature protein. The relatively little slower running behavior of the dimeric MP121 protein compared to the monomeric MP121 protein is probably due to a globular structure. The processing of the precursor protein to the mature protein could also be demonstrated in HuTK cells. In cells infected with wild-type viruses (without integrated foreign DNA) (HuTK- or NIH-3T3), no bands appeared in the Western blot.
Das Vaccinia ExpressionsSystem eignet sich bei Kotransfektion mit rekombinanten Vaccinia Viren, die für unterschiedliche Mitglieder der TGF-ß-Familie codieren, insbesondere auch für die Bildung von Heterodimeren. Über Affinitätssäulen mit spezifischen Antikörpern gegen die einzelnen TGF-ß-Familien- mitglieder ist es dann möglich, Heterodimere von Homodimeren zu trennen. Insbesondere von Interesse sind dabei die - sowie die ßA- und ßB-Ketten der Inhibine.The vaccinia expression system is suitable for cotransfection with recombinant vaccinia viruses that code for different members of the TGF-ß family, especially for the formation of heterodimers. Affinity columns with specific antibodies against the individual TGF-ß family members then make it possible to separate heterodimers from homodimers. Of particular interest are the inhibins, as well as the βA and βB chains.
Beispiel 3Example 3
Untersuchung zur Expression von MP121 in verschiedenenInvestigation of the expression of MP121 in different
MausgewebenMouse tissues
Total RNA aus verschiedenen Gweben (Gehirn, Herz, Niere, Leber, Lunge, Milz, Muskel, Ovar, Hoden) von 6 Wochen alten Mäusen sowie aus embryonalen Stammzellen wurde nach Standardmethoden isoliert. Jeweils 10 μg total RNA wurden in einen RNAse Protection Assay (RPA) von Ambion (RPA II Kit, #1410) nach Herstellerangaben eingesetzt. Um spezifische Proben für Aktivin ßA und Aktivin ßB zu erhalten, wurde die genomische DNA von Maus (129Sv) mit entsprechend spezifischen Primern aus dem reifen Anteil der Proteine, amplifiziert. Zur Erleichterung der Klonierung wurden an den Enden der Primer jeweils EcoR I und/oder BamH I oder Hind III Restriktions¬ schnittstellen eingefügt . Für Aktivin ßA wurden die Primer von der mRNA aus Ratten (GenBank Accession #M37482) abgelei¬ tet :Total RNA from various tissues (brain, heart, kidney, liver, lung, spleen, muscle, ovary, testis) from 6-week-old mice and from embryonic stem cells was isolated using standard methods. 10 μg total RNA was used in an RNAse Protection Assay (RPA) from Ambion (RPA II Kit, # 1410) according to the manufacturer's instructions. In order to obtain specific samples for activin ß A and activin ß B , mouse genomic DNA (129Sv) was used with correspondingly specific Primers from the mature portion of the proteins, amplified. To facilitate cloning, EcoR I and / or BamH I or Hind III restriction sites were inserted at the ends of the primers. For activin ß A , the primers were derived from the mRNA from rats (GenBank Accession # M37482):
GGATCCGAATTCGGCTTGGAGTGTGATGGCAAGG und GGATCCGAATTCCTCTGGGACCTGGCAACTCTAG.GGATCCGAATTCGGCTTGGAGTGTGATGGCAAGG and GGATCCGAATTCCTCTGGGACCTGGCAACTCTAG.
Für Aktivin ßg wurden degenerierte Primer von der humanen Sequenz (Mason et al . , Molecular Endocrinology 3, 1352-1358 (1989) abgeleitet:For activin ßg, degenerate primers were derived from the human sequence (Mason et al., Molecular Endocrinology 3, 1352-1358 (1989):
GAGAATTCCA(GA) CA(GA) TT(TC) TT(CT)AT und GCAAGCTTT(GA) TA(TC)TC(GA)TC(GA)TC.GAGAATTCCA (GA) CA (GA) TT (TC) TT (CT) AT and GCAAGCTTT (GA) TA (TC) TC (GA) TC (GA) TC.
Die entstehenden PCR Fragmente wurden in den Vektor pGEM-4 (Promega) subkloniert und überprüft. Die Aktivin-spezifischen und damit in RPA geschützten Sequenzen haben die Fragment- große von 369 bp für Aktivin ßA und 254 bp für Aktivin ßß. Bei MP121 umfaßt das geschützte Fragment die Sequenz von Position 887 bis Position 1164 in der SEQ ID NO.3. Die in pGEM-4 klonierten Fragmente wurden zur Herstellung der radio¬ aktiv markierten antisense RNA-Proben in vitro transkribiert. Dies erfolgte nach Herstellerangaben (Promega, Riboprobe Gemini Systems) unter Verwendung von lOOμM CTP und gleichzei¬ tig α32P-CTP (800 Ci/mmol, Amersham) . Ebenso wurde als Kon¬ trolle eine radioaktiv markierte RNA von dem mit Dde I linea- risierten Plasmid pTri-GAPDH (Ambion #7431) jedoch unter Verwendung von 1 mM CTP synthetisiert. Nach Isolation der 4 antisense RNA-Proben aus Polyacrylamid-Gelen wurden diese mit der jeweiligen Gewebe RNA aus Maus (lOμg total RNA pro Probe mit lxl05cpm) in denselben Ansatz über Nacht bei 42°C inku¬ biert. Die Analyse erfolgte in einem denaturierenden Gel nach Standardmethoden mit anschließender Autoradiographie über 4 Tage. Beispiel 4The resulting PCR fragments were subcloned into the vector pGEM-4 (Promega) and checked. The activin-specific and thus protected in RPA sequences have the fragment size of 369 bp for activin ß A and 254 bp for activin ß ß . In MP121 the protected fragment comprises the sequence from position 887 to position 1164 in SEQ ID NO.3. The fragments cloned in pGEM-4 were transcribed in vitro to produce the radioactively labeled antisense RNA samples. This was done according to the manufacturer's instructions (Promega, Riboprobe Gemini Systems) using 100 μm CTP and at the same time α 32 P-CTP (800 Ci / mmol, Amersham). Likewise, as a control, a radioactively labeled RNA was synthesized from the plasmid pTri-GAPDH (Ambion # 7431) linearized with Dde I, but using 1 mM CTP. After isolation of the 4 antisense RNA samples from polyacrylamide gels, these were incubated with the respective tissue RNA from mouse (10 μg total RNA per sample with lxl0 5 cpm) in the same mixture overnight at 42 ° C. The analysis was carried out in a denaturing gel according to standard methods with subsequent autoradiography over 4 days. Example 4
Teilreinigung von MP121 und Untersuchung zur Aktivität von teilgereinigtem MP121Partial cleaning of MP121 and investigation of the activity of partially cleaned MP121
MP121 Protein, welches durch Expression im Vaccinia System (s. Beispiel 2) gewonnen wurde, konnte über zwei Säulen teilgereinigt werden.MP121 protein, which was obtained by expression in the vaccinia system (see Example 2), could be partially purified using two columns.
Für die Produktion von MP121 wurden konfluente NIH-3T3 Zellen (DSM ACC 59, Swiss mouse embryo) mit derselben Anzahl an rekombinanten Viren für 30 Minuten bei 37°C infiziert und anschließend das entsprechende Kulturmedium mit 10% FCS und Penicillin/Streptomycin zugefügt.For the production of MP121, confluent NIH-3T3 cells (DSM ACC 59, Swiss mouse embryo) were infected with the same number of recombinant viruses for 30 minutes at 37 ° C. and then the corresponding culture medium with 10% FCS and penicillin / streptomycin was added.
Nach 4 Stunden bei 37°C wurde das Medium entfernt, die Zellen zweimal gewaschen und Produktionsmedium (s. Beispiel 2) ohne FCS zugesetzt. Nach 20 bis 22 Stunden Produktion wurde der Zellüberstand gesammelt und zur Entfernung der Viren zen- trifugiert (40000 x g für 30 Minuten bei 4°C) und filtriert (0,1 μm Porengröße, Millex W, Millipore # SLW25LS) . Der Kontrollüberstand (wt) nach Infektion durch Wildtyp Vaccinia Viren wurde vergleichbar gewonnen. Die Expression von MP121 wurde über Western blot Analyse überprüft und auf 50-100 μg/1 geschätzt.After 4 hours at 37 ° C., the medium was removed, the cells were washed twice and production medium (see Example 2) without FCS was added. After 20 to 22 hours of production, the cell supernatant was collected and centrifuged to remove the viruses (40,000 x g for 30 minutes at 4 ° C.) and filtered (0.1 μm pore size, Millex W, Millipore # SLW25LS). The control supernatant (wt) after infection by wild-type vaccinia viruses was obtained in a comparable manner. The expression of MP121 was checked by Western blot analysis and estimated to be 50-100 μg / l.
Der Zellkulturüberstand mit MP121 (1,1 1) wurde mit dem Proteaseinhibitor PMSF (1 μM) versetzt, auf eine Endkonzen¬ tration von 1 M (NH4)2S04, 20 mM Tris pH 8,0 gebracht und auf eine Phenyl-Sepharose (Fast Flow (high sub) Pharmacia #17- 0973-05) Säule (5 ml Bett) , equilibriert in Puffer A (1 M (NH4)2S04, 20 mM Tris pH 8,0), geladen. Die beladene Säule wurde mit 15 Säulenvolumen Puffer A und 10 Säulenvolumen Puffer B (20 mM Tris pH 8,0) gewaschen und mit einem linearen Gradienten nach 100% Puffer C (20 mM Tris pH 8,0, 80% Ethylenglycol) bei einer Durchflußrate von 1 ml/min innerhalb von 50 Min eluiert (5 ml pro Fraktion) . Über Western blot Analyse konnte überprüft werden, daß MP121 zwischen 50 und 80% Ethylenglycol eluiert. Aliquots dieser Fraktionen wurden in nach Herstellerangaben mit Silber gefärbten 15%igen Poly- acrylamidgelen (Silver Stain-II, Daiichi #SE140000) überprüft und die MP121 enthaltenden Fraktionen gepoolt. Die ver¬ gleichbaren Fraktionen nach Reinigung des Kontrollüberstandes wurden nach Analyse in mit Silber gefärbten Gelen ebenfalls gepoolt.The protease inhibitor PMSF (1 μM) was added to the cell culture supernatant with MP121 (1.1 1), brought to a final concentration of 1 M (NH 4 ) 2 SO 4 , 20 mM Tris pH 8.0 and to a phenyl Sepharose (Fast Flow (high sub) Pharmacia # 17-0973-05) column (5 ml bed), equilibrated in buffer A (1 M (NH 4 ) 2 SO 4 , 20 mM Tris pH 8.0), loaded. The loaded column was washed with 15 column volumes of buffer A and 10 column volumes of buffer B (20 mM Tris pH 8.0) and with a linear gradient to 100% buffer C (20 mM Tris pH 8.0, 80% ethylene glycol) at a flow rate of 1 ml / min eluted within 50 min (5 ml per fraction). Western blot analysis showed that MP121 elutes between 50 and 80% ethylene glycol. Aliquots of these fractions were made in silver-colored 15% poly acrylamide gels (Silver Stain-II, Daiichi # SE140000) checked and the fractions containing MP121 pooled. The comparable fractions after purification of the control supernatant were also pooled after analysis in gels stained with silver.
Die gepoolten Fraktionen wurden weiter mit Hilfe einer Reversed Phase HPLC aufgereinigt. Dazu wurde eine C8-Säule (Aquapore RP300, Applied Biosystems, Partikelgröße: 7μm, Porengröße: 300Ä) mit Puffer A (0,1% Trifluoressigsäure /Wasser) equilibriert. Nach Beladung der Säule mit den gepoolten, MP121 enthaltenden Fraktionen der Phenyl-Sepharose Säule, wurde ausgiebig mit Puffer A gewaschen. Das gebundene Protein wurde bei einer Flußrate von 0,2 ml/min mit einem linearen Gradienten von 1,5% Puffer B (90% Acetonitril, 0,1% Trifluoressigsäure) pro Minute eluiert. Fraktionen zu 600 μl wurden gesammelt und sowohl im Western blot als auch in mit Silber gefärbten Gelen analysiert. Das MP121 Protein eluiert unter den gewählten Bedingungen ungefähr ab 55% Acetonitril. Die Fraktionen mit MP121 wurden gepoolt. Das gleiche erfolgte mit den korrespondierenden Fraktionen aus der Reinigung des Kontrollüberstandes. Die Analyse im Silbergel ergab, daß MP121 noch mit anderen Proteinen verunreinigt war. Um gerei¬ nigtes MP121 zu erhalten, sind noch weitere Aufreinigungs- schritte notwendig.The pooled fractions were further purified using a reversed phase HPLC. For this purpose, a C8 column (Aquapore RP300, Applied Biosystems, particle size: 7μm, pore size: 300Ä) was equilibrated with buffer A (0.1% trifluoroacetic acid / water). After the column had been loaded with the pooled fractions of the phenyl-Sepharose column containing MP121, the mixture was washed extensively with buffer A. The bound protein was eluted at a flow rate of 0.2 ml / min with a linear gradient of 1.5% buffer B (90% acetonitrile, 0.1% trifluoroacetic acid) per minute. Fractions of 600 μl were collected and analyzed both in the Western blot and in silver-stained gels. The MP121 protein elutes under the chosen conditions from approximately 55% acetonitrile. The MP121 fractions were pooled. The same was done with the corresponding fractions from the cleaning of the control supernatant. Analysis in silver gel showed that MP121 was still contaminated with other proteins. In order to obtain cleaned MP121, further purification steps are necessary.
Denkbar sind für weitere Aufreinigungen auch andere dem Fachmann bekannte Methoden wie z.B. Gelsiebsäulen, Ionen¬ austauschersäulen, Affinitätssäulen oder Metallchelatsäulen.Other methods known to the person skilled in the art are also conceivable for further purifications, e.g. Gel sieve columns, ion exchange columns, affinity columns or metal chelate columns.
Durch Western blot Analyse wurde abgeschätzt, daß aus 1 1 Zellkulturüberstand ca. 8 μg teilgereinigtes MP121 isoliert wurden. Das teilgereinigte Protein wurde lyophilisiert bei - 80°C aufbewahrt.It was estimated by Western blot analysis that approximately 8 μg of partially purified MP121 were isolated from 1 l cell culture supernatant. The partially purified protein was stored lyophilized at -80 ° C.
Zur Überprüfung des Einflusses von MP121 auf dopaminerge Neuronen wurden Neuronen vom Mittelhirnboden von 14 Tage alten Rattenembryonen (E14) nach einer Methode beschrieben bei Shimoda et al. (Brain Res.586, 319-331 (1992)) isoliert. Die Vereinzelung und Kultivierung der Zellen erfolgte wie be¬ schrieben bei Krieglstein et al. (Neuroscience 63, 1189-1196 (1994)) . Die Zelldichte beträgt 200.000 Zellen/cm2 auf Poly- ornithin/Laminin beschichteten Deckgläsern. Nach 24 Stunden Kultivierung und anschließend alle drei Tage wurden zwei Drittel des Mediums (500 μl) entfernt und ersetzt durch frisches Medium mit den entsprechenden Zusätzen. Das nach der Phenyl-Sepharose und Reversed Phase HPLC lyophilisierte, teilgereinigte MP121 wurde in 50% Acetonitril gelöst und dem Medium zugesetzt. Die Endkonzentration von MP121 im Medium beträgt 20 ng/ml (Endkonzentration von Acetonitril ist 0,3%) . Von dem vergleichbar gereinigten Kontrollüberstand (wt) wurde eine vergleichbare Menge in 50% Acetonitril gelöst und einge¬ setzt. Die Mediumkontrolle enthält ebenfalls 0,3% Acetoni¬ tril. Nach acht Tagen wurden die Kulturen in 4% Paraformalde- hyd für 10 min bei Raumtemperatur fixiert, die Zellen mit Aceton (10 min, -20°C) permeabilisiert und mit PBS (Phosphate buffered saline) gewaschen. Nach Behandlung mit 1% H202 in PBS, Waschen und Blocken mit Pferdeserum erfolgte eine immun- cytochemische Färbung. Die Tyrosinhydroxylase (TH) ist ein limitierendes Enzym bei der Biosynthese von Dopamin und anderen Katecholaminen, so daß TH in den vorliegenden Kulturen (Noradrenalin enthaltende Zellen werden nicht isoliert) als Marker für dopa inerge Neuronen verwendet werden kann. TH wurde nachgewiesen über eine einstündige Inkubation bei 37°C mit einem Maus-monoklonalen Antikörper gegen Ratten TH (1:200 verdünnt, Boehringer Mannheim) und nachfolgender Detektion mit dem Vectastain ABC kit (Vecto Labs) . Die TH-positiven Zellen wurden in einer Fläche von 0,12 cm2 ausgezählt. Aus Fig.5 ist ersichtlich, daß MP121 einen positiven Einfluß auf das Überleben dopaminerger Neuro¬ nen aufweist.To check the influence of MP121 on dopaminergic neurons, neurons from the midbrain of 14-day-old rat embryos (E14) were described according to a method by Shimoda et al. (Brain Res. 586, 319-331 (1992)). The cells were separated and cultivated as described in Krieglstein et al. (Neuroscience 63, 1189-1196 (1994)). The cell density is 200,000 cells / cm 2 on cover slips coated with poly ornithine / laminin. After 24 hours of cultivation and then every three days, two thirds of the medium (500 μl) were removed and replaced by fresh medium with the corresponding additives. The partially purified MP121 lyophilized after the phenyl Sepharose and reversed phase HPLC was dissolved in 50% acetonitrile and added to the medium. The final concentration of MP121 in the medium is 20 ng / ml (final concentration of acetonitrile is 0.3%). A comparable amount of the comparable purified control supernatant (wt) was dissolved in 50% acetonitrile and used. The medium control also contains 0.3% acetonitrile. After eight days, the cultures were fixed in 4% paraformaldehyde for 10 min at room temperature, the cells were permeabilized with acetone (10 min, -20 ° C.) and washed with PBS (phosphate buffered saline). After treatment with 1% H 2 0 2 in PBS, washing and blocking with horse serum, an immunocytochemical staining was carried out. Tyrosine hydroxylase (TH) is a limiting enzyme in the biosynthesis of dopamine and other catecholamines, so that TH can be used as a marker for dopa-inert neurons in the present cultures (cells containing noradrenaline are not isolated). TH was demonstrated by incubation for one hour at 37 ° C with a mouse monoclonal antibody against rats TH (diluted 1: 200, Boehringer Mannheim) and subsequent detection with the Vectastain ABC kit (Vecto Labs). The TH-positive cells were counted in an area of 0.12 cm 2 . It can be seen from FIG. 5 that MP121 has a positive influence on the survival of dopaminergic neurons.
Figur 5 zeigt die Anzahl der überlebenden TH-immunreaktiven dopaminergen Neuronen nach Isolation aus dem Mittelhirn von Rattenembryonen (E14) und 8 Tagen Kultivierung. Getestet wurde der Effekt von 20 ng/ml teilgereinigtem MP121 im Ver- gleich zu der äquivalenten Menge teilgereinigten Kontroll¬ überstandes (wt) sowie unbehandelte Neuronen (Kontrolle: Medium mit 0,3% Acetonitril). Gezeigt ist der Mittelwert ±SEM aus einer Dreifachbestimmung. FIG. 5 shows the number of surviving TH-immunoreactive dopaminergic neurons after isolation from the midbrain of rat embryos (E14) and 8 days of cultivation. The effect of 20 ng / ml partially cleaned MP121 was tested in equal to the equivalent amount of partially purified control supernatant (wt) and untreated neurons (control: medium with 0.3% acetonitrile). The mean ± SEM from a triple determination is shown.
Detaillierte Beschreibung der Figuren 3 bis 5Detailed description of Figures 3 to 5
Figur 3 : Schematisierter Western blot mit Hühner Antikörpern gegen MP121Figure 3: Schematic Western blot with chicken antibodies against MP121
1: E.coli Zellen transformiert mit pBP4MP121His unter reduzierenden Bedingungen (1% ß-Mercaptoethanol) 2: Zellkulturüberstand von NIH-3T3 Zellen nach Infektion mit rekombinanten Viren (mit insertierter MP121 cDNA) unter reduzierenden Bedingungen (1% ß-Mercaptoethanol) 3 : Zellkulturüberstand von NIH-3T3 Zellen nach Infektion mit rekombinanten Viren (mit insertierter MP121 cDNA) unter nicht reduzierenden Bedingungen1: E. coli cells transformed with pBP4MP121His under reducing conditions (1% ß-mercaptoethanol) 2: Cell culture supernatant from NIH-3T3 cells after infection with recombinant viruses (with inserted MP121 cDNA) under reducing conditions (1% ß-mercaptoethanol) 3: Cell culture supernatant from NIH-3T3 cells after infection with recombinant viruses (with inserted MP121 cDNA) under non-reducing conditions
M:vorgefärbter Protein-Mol.ekulargewichtsmarker mit den ange¬ gebenen apparenten Molekulargewichten (Gibco BRL #26041-020)M: pre-colored protein molecular weight marker with the indicated apparent molecular weights (Gibco BRL # 26041-020)
Figur 4: Autoradiogramm nach Gelanalyse eines RNAse Protec- tion Assays mit speziifschen Proben gegen Aktivin ßAA), Aktivin ^(ßB), MP121 sowie zur Kontrolle gegen GAPDH.Figure 4: Autoradiogram after gel analysis of an RNAse protection assay with specific samples against activin ß AA ), activin ^ (ß B ), MP121 and as a control against GAPDH.
Getestet wurde total RNA isoliert aus verschiedenen Mausge¬ weben (1: Gehirn, 2: Herz, 3: Niere, 4: Leber, 5: Lunge, 6: Muskel, 9: Ovar, 10: Milz, 11: Hoden), aus embryonalen Stamm¬ zellen (12: CJ7) und als Kontrolle aus Hefe (Spur 13). In Spur 14 wurde als Kontrolle keine RNA eingesetzt. Die in die Hybridisierung eingesetzten ungeschützten antisense RNA- Proben sind in Spur 8 und 15 aufgetragen und am rechten Rand mit der erwarteten Fragmentgröße in Klammern markiert. Die Banden für die geschützten Fragmente sind am linknen Rand markiert. Als Marker (Spur 7) wurde pBR322 restringiert mit Msp I (Biolabs #303) und endmarkiert mit γ-32P-ATP (Amersham) genommen.Total RNA was tested isolated from various mouse tissues (1: brain, 2: heart, 3: kidney, 4: liver, 5: lung, 6: muscle, 9: ovary, 10: spleen, 11: testis), from embryonic Stem cells (12: CJ7) and as a control from yeast (lane 13). In lane 14 no RNA was used as a control. The unprotected antisense RNA samples used in the hybridization are plotted in lanes 8 and 15 and marked in brackets on the right with the expected fragment size. The bands for the protected fragments are marked on the left edge. As a marker (lane 7), pBR322 was restricted with Msp I (Biolabs # 303) and end-labeled with γ- 32 P-ATP (Amersham).
Figur 5 zeigt die Anzahl der überlebenden TH-immunreaktiven dopaminergen Neuronen nach Isolation aus dem Mit¬ telhirn von Rattenembryonen (E14) und 8 Tagen Kul- tivierung. Getestet wurde der Effekt von 20 ng/ml teilgereinigtem MP121 im Vergleich zu der äquiva¬ lenten Menge teilgereinigten Kontrollüberstandes (wt) sowie unbehandelte Neuronen (Kontrolle: Medium mit 0,3% Acetonitril). Gezeigt ist der Mittelwert j+SEM aus einer Dreifachbestimmung. FIG. 5 shows the number of surviving TH-immunoreactive dopaminergic neurons after isolation from the midbrain of rat embryos (E14) and 8 days of culture. activation. The effect of 20 ng / ml of partially purified MP121 was tested in comparison to the equivalent amount of partially purified control supernatant (wt) and untreated neurons (control: medium with 0.3% acetonitrile). The mean value j + SEM from a triple determination is shown.
SEQUENZPROTOKOLLSEQUENCE LOG
(1) ALLGEMEINE ANGABEN:(1. GENERAL INFORMATION:
(i) ANMELDER:(i) APPLICANT:
(A) NAME: Biopharm Gesellschaft zur biotechnologischen(A) NAME: Biopharm Society for Biotechnological
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(E) LAND: Germany(E) COUNTRY: Germany
(F) POSTLEITZAHL: 69115(F) POSTAL NUMBER: 69115
(ii) BEZEICHNUNG DER ERFINDUNG: Neuer Wachstums-/Differenzie- rungsfaktor der TGF-beta-Familie(ii) DESCRIPTION OF THE INVENTION: New growth / differentiation factor of the TGF-beta family
(iii) ANZAHL DER SEQUENZEN: 6(iii) NUMBER OF SEQUENCES: 6
(iv) COMPUTER-LESBARE FASSUNG:(iv) COMPUTER READABLE VERSION:
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(D) SOFTWARE: Patentin Release #1.0, Version #1.30 (EPA)(D) SOFTWARE: Patentin Release # 1.0, Version # 1.30 (EPA)
(v) DATEN DER JETZIGER ANMELDUNG:(v) DATE OF REGISTRATION:
ANMELDENUMMER: WO PCT/EP95/02552REGISTRATION NUMBER: WO PCT / EP95 / 02552
(2) ANGABEN ZU SEQ ID NO: 1:(2) INFORMATION ON SEQ ID NO: 1:
(i) SEQUENZKENNZEICHEN:(i) SEQUENCE LABEL:
(A) LÄNGE: 2272 Basenpaare(A) LENGTH: 2272 base pairs
(B) ART: Nucleotid(B) TYPE: nucleotide
(C) STRANGFORM: Doppelstrang(C) STRAND FORM: double strand
(D) TOPOLOGIE: linear (vi) URSPRÜNGLICHE HERKUNFT:(D) TOPOLOGY: linear (vi) ORIGINAL ORIGIN:
(A) ORGANISMUS: Homo sapiens(A) ORGANISM: Homo sapiens
(xi) SEQUENZBESCHREIBUNG: SEQ ID NO: 1:(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 1:
CAAGGAGCCA TGCCAGCTGG ACACACACTT CTTCCAGGGC CTCTGGCAGC CAGGACAGAG 60CAAGGAGCCA TGCCAGCTGG ACACACACTT CTTCCAGGGC CTCTGGCAGC CAGGACAGAG 60
TTGAGACCAC AGCTGTTGAG ACCCTGAGCC CTGAGTCTGT ATTGCTCAAG AAGGGCCTTC 120TTGAGACCAC AGCTGTTGAG ACCCTGAGCC CTGAGTCTGT ATTGCTCAAG AAGGGCCTTC 120
CCCAGCAATG ACCTCCTCAT TGCTTCTGGC CTTTCTCCTC CTGGCTCCAA CCACAGTGGC 180CCCAGCAATG ACCTCCTCAT TGCTTCTGGC CTTTCTCCTC CTGGCTCCAA CCACAGTGGC 180
CACTCCCAGAGCTGGCGGTC AGTGTCCAGC ATGTGGGGGG CCCACCTTGG AACTGGAGAG 240CACTCCCAGAGCTGGCGGTC AGTGTCCAGC ATGTGGGGGG CCCACCTTGG AACTGGAGAG 240
CCAGCGGGAG CTGCTTCTTG ATCTGGCCAA GAGAAGCATC TTGGACAAGC TGCACCTCAC 300CCAGCGGGAG CTGCTTCTTG ATCTGGCCAA GAGAAGCATC TTGGACAAGC TGCACCTCAC 300
CCAGCGCCCAACACTGAACC GCCCTGTGTC CAGAGCTGCT TTGAGGACTG CACTGCAGCA 360CCAGCGCCCAACACTGAACC GCCCTGTGTC CAGAGCTGCT TTGAGGACTG CACTGCAGCA 360
CCTCCACGGG GTCCCACAGG GGGCACTTCT AGAGGACAAC AGGGAACAGG AATGTGAAAT 420CCTCCACGGG GTCCCACAGG GGGCACTTCT AGAGGACAAC AGGGAACAGG AATGTGAAAT 420
CATCAGCTTT GCTGAGACAG GCCTCTCCAC CATCAACCAGACTCGTCTTG ATTTTCACTT 480CATCAGCTTT GCTGAGACAG GCCTCTCCAC CATCAACCAGACTCGTCTTG ATTTTCACTT 480
CTCCTCTGAT AGAACTGCTG GTGACAGGGA GGTCCAGCAG GCCAGTCTCA TGTTCTTTGT 540CTCCTCTGAT AGAACTGCTG GTGACAGGGA GGTCCAGCAG GCCAGTCTCA TGTTCTTTGT 540
GCAGCTCCCT TCCAATACCA CTTGGACCTT GAAAGTGAGA GTCCTTGTGC TGGGTCCACA 600GCAGCTCCCT TCCAATACCA CTTGGACCTT GAAAGTGAGA GTCCTTGTGC TGGGTCCACA 600
TAATACCAAC CTCACCTTGG CTACTCAGTA CCTGCTGGAG GTGGATGCCAGTGGCTGGCA 660TAATACCAAC CTCACCTTGG CTACTCAGTA CCTGCTGGAG GTGGATGCCAGTGGCTGGCA 660
TCAACTCCCC CTAGGGCCTG AAGCTCAAGC TGCCTGCAGC CAGGGGCACC TGACCCTGGA 720TCAACTCCCC CTAGGGCCTG AAGCTCAAGC TGCCTGCAGC CAGGGGCACC TGACCCTGGA 720
ERSATZBLÄTT(REGEL26) GCTGGTACTT GAAGGCCAGG TAGCCCAGAG CTCAGTCATC CTGGGTGGAG CTGCCCATAG 780SPARE BLADE (RULE 26) GCTGGTACTT GAAGGCCAGG TAGCCCAGAG CTCAGTCATC CTGGGTGGAG CTGCCCATAG 780
GCCTTTTGTG GCAGCCCGGG TGAGAGTTGG GGGCAAACAC CAGATTCACC GACGAGGCAT 840GCCTTTTGTG GCAGCCCGGG TGAGAGTTGG GGGCAAACAC CAGATTCACC GACGAGGCAT 840
CGACTGCCAA GGAGGGTCCA GGATGTGCTG TCGACAAGAG TTTTTTGTGGACTTCCGTGA 900CGACTGCCAA GGAGGGTCCA GGATGTGCTG TCGACAAGAG TTTTTTGTGGACTTCCGTGA 900
GATTGGCTGG CACGACTGGA TCATCCAGCC TGAGGGCTAC GCCATGAACT TCTGCATAGG 960GATTGGCTGG CACGACTGGA TCATCCAGCC TGAGGGCTAC GCCATGAACT TCTGCATAGG 960
GCAGTGCCCA CTACACATAG CAGGCATGCC TGGTATTGCT GCCTCCTTTC ACACTGCAGT 1020GCAGTGCCCA CTACACATAG CAGGCATGCC TGGTATTGCT GCCTCCTTTC ACACTGCAGT 1020
GCTCAATCTT CTCAAGGCCAACACAGCTGC AGGCACCACT GGAGGGGGCT CATGCTGTGT 1080GCTCAATCTT CTCAAGGCCAACACAGCTGC AGGCACCACT GGAGGGGGCT CATGCTGTGT 1080
ACCCACGGCC CGGCGCCCCC TGTCTCTGCT CTATTATGAC AGGGACAGCAACATTGTCAA 1140ACCCACGGCC CGGCGCCCCC TGTCTCTGCT CTATTATGAC AGGGACAGCAACATTGTCAA 1140
GACTGACATA CCTGACATGG TAGTAGAGGC CTGTGGGTGC AGTTAGTCTA TGTGTGGTAT 1200GACTGACATA CCTGACATGG TAGTAGAGGC CTGTGGGTGC AGTTAGTCTA TGTGTGGTAT 1200
GGGCAGCCCAAGGTTGCATG GGAAAACACG CCCCTACAGAAGTGCACTTC CTTGAGAGGA 1260GGGCAGCCCAAGGTTGCATG GGAAAACACG CCCCTACAGAAGTGCACTTC CTTGAGAGGA 1260
GGGAATGACC TCATTCTCTG TCCAGAATGT GGACTCCCTC TTCCTGAGCATCTTATGGAA 1320GGGAATGACC TCATTCTCTG TCCAGAATGT GGACTCCCTC TTCCTGAGCATCTTATGGAA 1320
ATTACCCCAC CTTTGACTTGAAGAAACCTT CATCTAAAGC AAGTCACTGT GCCATCTTCC 1380ATTACCCCAC CTTTGACTTGAAGAAACCTT CATCTAAAGC AAGTCACTGT GCCATCTTCC 1380
TGACCACTAC CCTCTTTCCTAGGGCATAGT CCATCCCGCT AGTCCATCCC GCTAGCCCCA 1440TGACCACTAC CCTCTTTCCTAGGGCATAGT CCATCCCGCT AGTCCATCCC GCTAGCCCCA 1440
CTCCAGGGAC TCAGACCCAT CTCCAACCAT GAGCAATGCC ATCTGGTTCC CAGGCAAAGA 1500CTCCAGGGAC TCAGACCCAT CTCCAACCAT GAGCAATGCC ATCTGGTTCC CAGGCAAAGA 1500
CACCCTTAGC TCACCTTTAATAGACCCCAT AACCCACTAT GCCTTCCTGT CCTTTCTACT 1560CACCCTTAGC TCACCTTTAATAGACCCCAT AACCCACTAT GCCTTCCTGT CCTTTCTACT 1560
CAATGGTCCC CACTCCAAGATGAGTTGACA CAACCCCTTC CCCCAATTTT TGTGGATCTC 1620CAATGGTCCC CACTCCAAGATGAGTTGACA CAACCCCTTC CCCCAATTTT TGTGGATCTC 1620
CAGAGAGGCC CTTCTTTGGATTCACCAAAG TTTAGATCAC TGCTGCCCAAAATAGAGGCT 1680CAGAGAGGCC CTTCTTTGGATTCACCAAAG TTTAGATCAC TGCTGCCCAAAATAGAGGCT 1680
TACCTACCCC CCTCTTTGTT GTGAGCCCCT GTCCTTCTTA GTTGTCCAGG TGAACTACTA 1740TACCTACCCC CCTCTTTGTT GTGAGCCCCT GTCCTTCTTA GTTGTCCAGG TGAACTACTA 1740
AAGCTCTCTT TGCATACCTT CATCCATTTT TTGTCCTTCT CTGCCTTTCT CTATGCCCTT 1800AAGCTCTCTT TGCATACCTT CATCCATTTT TTGTCCTTCT CTGCCTTTCT CTATGCCCTT 1800
AAGGGGTGAC TTGCCTGAGC TCTATCACCT GAGCTCCCCT GCCCTCTGGC TTCCTGCTGA 1860AAGGGGTGAC TTGCCTGAGC TCTATCACCT GAGCTCCCCT GCCCTCTGGC TTCCTGCTGA 1860
GGTCAGGGCATTTCTTATCC CTGTTCCCTC TCTGTCTAGG TGTCATGGTT CTGTGTAACT 1920GGTCAGGGCATTTCTTATCC CTGTTCCCTC TCTGTCTAGG TGTCATGGTT CTGTGTAACT 1920
GTGGCTATTC TGTGTCCCTA CACTACCTGG CTACCCCCTT CCATGGCCCC AGCTCTGCCT 1980GTGGCTATTC TGTGTCCCTA CACTACCTGG CTACCCCCTT CCATGGCCCC AGCTCTGCCT 1980
ACATTCTGAT TTTTTTTTTT TTTTTTTTTT TGAAAAGTTAAAAATTCCTT AATTTTTTAT 2040ACATTCTGAT TTTTTTTTTT TTTTTTTTTT TGAAAAGTTAAAAATTCCTT AATTTTTTAT 2040
TCCTGGTACC ACTACCACAATTTACAGGGC AATATACCTG ATGTAATGAAAAGAAAAAGA 2100TCCTGGTACC ACTACCACAATTTACAGGGC AATATACCTG ATGTAATGAAAAGAAAAAGA 2100
AAAAGACAAA GCTACAACAGATAAAAGACC TCAGGAATGT ACATCTAATT GACACTACAT 2160AAAAGACAAA GCTACAACAGATAAAAGACC TCAGGAATGT ACATCTAATT GACACTACAT 2160
TGCATTAATC AATAGCTGCA CTTTTTGCAAACTGTGGCTA TGACAGTCCT GAACAAGAAG 2220TGCATTAATC AATAGCTGCA CTTTTTGCAAACTGTGGCTA TGACAGTCCT GAACAAGAAG 2220
GGTTTCCTGT TTAAGCTGCA GTAACTTTTC TGACTATGGA TCATCGTTCC TT 2272 (2) ANGABEN ZU SEQ ID NO: 2 :GGTTTCCTGT TTAAGCTGCA GTAACTTTTC TGACTATGGA TCATCGTTCC TT 2272 (2) INFORMATION ON SEQ ID NO: 2:
(i) SEQUENZKENNZEICHEN:(i) SEQUENCE LABEL:
(A) LÄNGE: 352 Aminosäuren(A) LENGTH: 352 amino acids
(B) ART: Aminosäure(B) TYPE: amino acid
(C) STRANGFORM:(C) STRAND FORM:
(D) TOPOLOGIE: linear (ii) ART DES MOLEKÜLS: Peptid(D) TOPOLOGY: linear (ii) MOLECULE TYPE: peptide
ERSATZBLAIT (REGEL 26) (vi) URSPRÜNGLICHE HERKUNFT:REPLACEMENT BLAIT (RULE 26) (vi) ORIGINAL ORIGIN:
(A) ORGANISMUS: Homo sapiens(A) ORGANISM: Homo sapiens
(xi) SEQUENZBESCHREIBUNG: SEQ ID NO: 2:(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 2:
Met Thr Ser Ser Leu Leu Leu Ala Phe Leu Leu Leu Ala Pro Thr Thr 1 5 10 15Met Thr Ser Ser Leu Leu Leu Ala Phe Leu Leu Leu Ala Pro Thr Thr 1 5 10 15
Val Ala Thr Pro Arg Ala Gly Gly Gin Cys Pro Ala Cys Gly Gly Pro 20 25 30Val Ala Thr Pro Arg Ala Gly Gly Gin Cys Pro Ala Cys Gly Gly Pro 20 25 30
Thr Leu Glu Leu Glu Ser Gin Arg Glu Leu Leu Leu Asp Leu Ala Lys 35 40 45Thr Leu Glu Leu Glu Ser Gin Arg Glu Leu Leu Leu Asp Leu Ala Lys 35 40 45
Arg Ser Ile Leu Asp Lys Leu His Leu Thr Gin Arg Pro Thr Leu Asn 50 55 60Arg Ser Ile Leu Asp Lys Leu His Leu Thr Gin Arg Pro Thr Leu Asn 50 55 60
Arg Pro Val Ser Arg Ala Ala Leu Arg Thr Ala Leu Gin His Leu His 65 70 75 80Arg Pro Val Ser Arg Ala Ala Leu Arg Thr Ala Leu Gin His Leu His 65 70 75 80
Gly Val Pro Gin Gly Ala Leu Leu Glu Asp Asn Arg Glu Gin Glu CysGly Val Pro Gin Gly Ala Leu Leu Glu Asp Asn Arg Glu Gin Glu Cys
85 90 9585 90 95
Glu Ile Ile Ser Phe Ala Glu Thr Gly Leu Ser Thr Ile Asn Gin Thr 100 105 110Glu Ile Ile Ser Phe Ala Glu Thr Gly Leu Ser Thr Ile Asn Gin Thr 100 105 110
Arg Leu Asp Phe His Phe Ser Ser Asp Arg Thr Ala Gly Asp Arg Glu 115 120 125Arg Leu Asp Phe His Phe Ser Ser Asp Arg Thr Ala Gly Asp Arg Glu 115 120 125
Val Gin Gin Ala Ser Leu Met Phe Phe Val Gin Leu Pro Ser Asn Thr 130 135 140Val Gin Gin Ala Ser Leu Met Phe Phe Val Gin Leu Pro Ser Asn Thr 130 135 140
Thr Trp Thr Leu Lys Val Arg Val Leu Val Leu Gly Pro His Asn Thr 145 150 155 160Thr Trp Thr Leu Lys Val Arg Val Leu Val Leu Gly Pro His Asn Thr 145 150 155 160
Asn Leu Thr Leu Ala Thr Gin Tyr Leu Leu Glu Val Asp Ala Ser GlyAsn Leu Thr Leu Ala Thr Gin Tyr Leu Leu Glu Val Asp Ala Ser Gly
165 170 175165 170 175
Trp His Gin Leu Pro Leu Gly Pro Glu Ala Gin Ala Ala Cys Ser Gin 180 185 190Trp His Gin Leu Pro Leu Gly Pro Glu Ala Gin Ala Ala Cys Ser Gin 180 185 190
Gly His Leu Thr Leu Glu Leu Val Leu Glu Gly Gin Val Ala Gin Ser 195 200 205Gly His Leu Thr Leu Glu Leu Val Leu Glu Gly Gin Val Ala Gin Ser 195 200 205
Ser Val Ile Leu Gly Gly Ala Ala His Arg Pro Phe Val Ala Ala Arg 210 215 220Ser Val Ile Leu Gly Gly Ala Ala His Arg Pro Phe Val Ala Ala Arg 210 215 220
Val Arg Val Gly Gly Lys His Gin Ile His Arg Arg Gly Ile Asp Cys 225 230 235 240Val Arg Val Gly Gly Lys His Gin Ile His Arg Arg Gly Ile Asp Cys 225 230 235 240
Gin Gly Gly Ser Arg Met Cys Cys Arg Gin Glu Phe Phe Val Asp PheGin Gly Gly Ser Arg Met Cys Cys Arg Gin Glu Phe Phe Val Asp Phe
245 250 255245 250 255
Arg Glu Ile Gly Trp His Asp Trp Ile Ile Gin Pro Glu Gly Tyr Ala 260 265 270Arg Glu Ile Gly Trp His Asp Trp Ile Ile Gin Pro Glu Gly Tyr Ala 260 265 270
Met Asn Phe Cys Ile Gly Gin Cys Pro Leu His Ile Ala Gly Met Pro 275 280 285Met Asn Phe Cys Ile Gly Gin Cys Pro Leu His Ile Ala Gly Met Pro 275 280 285
Gly Ile Ala Ala Ser Phe His Thr Ala Val Leu Asn Leu Leu Lys AlaGly Ile Ala Ala Ser Phe His Thr Ala Val Leu Asn Leu Leu Lys Ala
ERSÄΓZBLAΓT (REGEL 26) 290 295 300ERSÄΓZBLAΓT (RULE 26) 290 295 300
Asn Thr Ala Ala Gly Thr Thr Gly Gly Gly Ser Cys Cys Val Pro Thr 305 310 315 320Asn Thr Ala Ala Gly Thr Thr Gly Gly Gly Ser Cys Cys Val Pro Thr 305 310 315 320
Ala Arg Arg Pro Leu Ser Leu Leu Tyr Tyr Asp Arg Asp Ser Asn IleAla Arg Arg Pro Leu Ser Leu Leu Tyr Tyr Asp Arg Asp Ser Asn Ile
325 330 335325 330 335
Val Lys Thr Asp Ile Pro Asp Met Val Val Glu Ala Cys Gly Cys Ser 340 345 350Val Lys Thr Asp Ile Pro Asp Met Val Val Glu Ala Cys Gly Cys Ser 340 345 350
(2) ANGABEN ZU SEQ ID NO: 3:(2) INFORMATION ON SEQ ID NO: 3:
(i) SEQUENZKENNZEICHEN:(i) SEQUENCE LABEL:
(A) LÄNGE: 1558 Basenpaare(A) LENGTH: 1558 base pairs
(B) ART: Nucleotid(B) TYPE: nucleotide
(C) STRANGFORM: Doppelstrang(C) STRAND FORM: double strand
(D) TOPOLOGIE: linear (vi) URSPRÜNGLICHE HERKUNFT:(D) TOPOLOGY: linear (vi) ORIGINAL ORIGIN:
(A) ORGANISMUS: Mouse(A) ORGANISM: Mouse
(xi) SEQUENZBESCHREIBUNG: SEQ ID NO: 3:(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 3:
AAGGAGTCAT GCCAGTCGGA GGTCAGTCAC ATTCCTCCCA GGGTCCCTGG TGCCCAGGAC 60AAGGAGTCAT GCCAGTCGGA GGTCAGTCAC ATTCCTCCCA GGGTCCCTGG TGCCCAGGAC 60
AGAGTTGAAG CACTCCCGTT GAGACCCTGAATATAGGCTT TGGGTCCTTT AAGGAGGCTA 120AGAGTTGAAG CACTCCCGTT GAGACCCTGAATATAGGCTT TGGGTCCTTT AAGGAGGCTA 120
TCCTCCAGCAATGGCCTCCT CCTTGCTCCT GGCTCTTCTG TTCCTGACTC CAACCACAGT 180TCCTCCAGCAATGGCCTCCT CCTTGCTCCT GGCTCTTCTG TTCCTGACTC CAACCACAGT 180
AGTGAACCCC AAAACTGAGG GTCCATGCCC AGCATGTTGG GGTGCCATCT TTGACCTGGA 240AGTGAACCCC AAAACTGAGG GTCCATGCCC AGCATGTTGG GGTGCCATCT TTGACCTGGA 240
GAGCCAGCGG GAGCTGCTTC TCGATTTGGC CAAGAAAAGT ATCCTGGACAAGCTGCACCT 300GAGCCAGCGG GAGCTGCTTC TCGATTTGGC CAAGAAAAGT ATCCTGGACAAGCTGCACCT 300
CAGCCAGCGC CCCATACTCAGTCGGCCAGT GTCCAGAGGG GCTCTCAAGA CCGCGCTGCA 360CAGCCAGCGC CCCATACTCAGTCGGCCAGT GTCCAGAGGG GCTCTCAAGA CCGCGCTGCA 360
GCGCCTCCGC GGGCCTCGAC GGGAAACCCT GTTGGAGCAT GACCAGAGAC AAGAAGAATA 420GCGCCTCCGC GGGCCTCGAC GGGAAACCCT GTTGGAGCAT GACCAGAGAC AAGAAGAATA 420
TGAGATCATC AGCTTTGCTG ACACAGACCT CTCCAGCATC AACCAGACCC GGCTCGAGTT 480TGAGATCATC AGCTTTGCTG ACACAGACCT CTCCAGCATC AACCAGACCC GGCTCGAGTT 480
CCACTTCTCT GGTAGAATGG CCAGTGGCAT GGAGGTCCGG CAGACCCGCT TCATGTTCTT 540CCACTTCTCT GGTAGAATGG CCAGTGGCAT GGAGGTCCGG CAGACCCGCT TCATGTTCTT 540
CGTGCAGTTC CCCCACAATG CCACCCAGAC CATGAATATAAGAGTTCTTG TGCTAAGACC 600CGTGCAGTTC CCCCACAATG CCACCCAGAC CATGAATATAAGAGTTCTTG TGCTAAGACC 600
ATATGACACC AACCTCACCT TGACAAGTCA GTACGTGGTG CAGGTGAATG CCAGTGGCTG 660ATATGACACC AACCTCACCT TGACAAGTCA GTACGTGGTG CAGGTGAATG CCAGTGGCTG 660
GTACCAGCTT CTCCTGGGAC CTGAAGCTCAAGCTGCTTGC AGCCAGGGAC ACCTTACTCT 720GTACCAGCTT CTCCTGGGAC CTGAAGCTCAAGCTGCTTGC AGCCAGGGAC ACCTTACTCT 720
GGAGCTGGTA CCAGAAAGCC AGGTGGCCCA CAGTTCCTTG ATCCTGGGCT GGTTTTCCCA 780GGAGCTGGTA CCAGAAAGCC AGGTGGCCCA CAGTTCCTTG ATCCTGGGCT GGTTTTCCCA 780
CAGGCCTTTT GTGGCAGCCC AGGTAAGGGT TGAGGGCAAG CATCGGGTTC GCCGGCGAGG 840CAGGCCTTTT GTGGCAGCCC AGGTAAGGGT TGAGGGCAAG CATCGGGTTC GCCGGCGAGG 840
TATCGATTGC CAGGGGGGGT CCAGGATGTG CTGTCGACAA GAGTTTTTTG TAGACTTCCG 900TATCGATTGC CAGGGGGGGT CCAGGATGTG CTGTCGACAA GAGTTTTTTG TAGACTTCCG 900
TGAGATTGGC TGGAATGACT GGATCATCCA GCCTGAAGGC TATGCCATGAACTTCTGCAC 960TGAGATTGGC TGGAATGACT GGATCATCCA GCCTGAAGGC TATGCCATGAACTTCTGCAC 960
TGGGCAGTGC CCACTACATG TGGCAGGCAT GCCTGGCATC TCTGCCTCCT TTCACACTGC 1020TGGGCAGTGC CCACTACATG TGGCAGGCAT GCCTGGCATC TCTGCCTCCT TTCACACTGC 1020
AGTGCTGAAT CTGCTCAAAG CCAACGCAGC TGCTGGCACC ACTGGCAGGG GCTCGTGCTG 1080AGTGCTGAAT CTGCTCAAAG CCAACGCAGC TGCTGGCACC ACTGGCAGGG GCTCGTGCTG 1080
CGTGCCTACA TCTCGGCGCC CTCTGTCTTT GCTCTACTAT GACAGGGACA GCAACATTGT 1140CGTGCCTACA TCTCGGCGCC CTCTGTCTTT GCTCTACTAT GACAGGGACA GCAACATTGT 1140
ERSATZBLAΓΓ (REGEL 26) CAAGACGGAT ATACCTGACATGGTGGTCGA GGCCTGCGGG TGTAGTTAGC TTATGGGTGA 1200REPLACEMENT BLAΓΓ (RULE 26) CAAGACGGAT ATACCTGACATGGTGGTCGA GGCCTGCGGG TGTAGTTAGC TTATGGGTGA 1200
TACAGGCTGC CTGAGGTAGAATGGCCTTCC TCAGGAAGGG AAACTCTGTT CCCACTTCTG 1260TACAGGCTGC CTGAGGTAGAATGGCCTTCC TCAGGAAGGG AAACTCTGTT CCCACTTCTG 1260
TCCAGAATGG AAACACCTTT CTAAGCATGC AGACATCCCT CTGTGGACTT CAGGGGATCC 1320TCCAGAATGG AAACACCTTT CTAAGCATGC AGACATCCCT CTGTGGACTT CAGGGGATCC 1320
ACCTCTAAAG AGAGTCACTAGTGACCAACA GCCTTTCTCT CTCCTGGGAC ATGGTTGACC 1380ACCTCTAAAG AGAGTCACTAGTGACCAACA GCCTTTCTCT CTCCTGGGAC ATGGTTGACC 1380
CAGTACACCC ATCCTCAGCC TTAAGTTAGA GGCTAATCGA CTCCTACATA TATATGTCAT 1440CAGTACACCC ATCCTCAGCC TTAAGTTAGA GGCTAATCGA CTCCTACATA TATATGTCAT 1440
TTTGTCCTAG CAAACACCCC TTAGCTCCCC TTAGTCAACT ATGTAATCTA CTCTGCCTCC 1500TTTGTCCTAG CAAACACCCC TTAGCTCCCC TTAGTCAACT ATGTAATCTA CTCTGCCTCC 1500
CTGACCCTGC CACCGGAAGG TTCCTATTCC ACGATGATAT GCCTTAGTGT CTCCCCTT 1558 (2) ANGABEN ZU SEQ ID NO: 4:CTGACCCTGC CACCGGAAGG TTCCTATTCC ACGATGATAT GCCTTAGTGT CTCCCCTT 1558 (2) INFORMATION ABOUT SEQ ID NO: 4:
(i) SEQUENZKENNZEICHEN:(i) SEQUENCE LABEL:
(A) LÄNGE: 352 Aminosäuren(A) LENGTH: 352 amino acids
(B) ART: Aminosäure(B) TYPE: amino acid
(C) STRANGFORM:(C) STRAND FORM:
(D) TOPOLOGIE: linear (ii) ART DES MOLEKÜLS: Peptid (vi) URSPRÜNGLICHE HERKUNFT:(D) TOPOLOGY: linear (ii) MOLECULE TYPE: peptide (vi) ORIGINAL ORIGIN:
(A) ORGANISMUS: Mouse(A) ORGANISM: Mouse
( i) SEQUENZBESCHREIBUNG: SEQ ID NO: 4:(i) SEQUENCE DESCRIPTION: SEQ ID NO: 4:
Met Ala Ser Ser Leu Leu Leu Ala Leu Leu Phe Leu Thr Pro Thr Thr 1 5 10 15Met Ala Ser Ser Leu Leu Leu Ala Leu Leu Phe Leu Thr Pro Thr Thr 1 5 10 15
Val Val Asn Pro Lys Thr Glu Gly Pro Cys Pro Ala Cys Trp Gly Ala 20 25 30Val Val Asn Pro Lys Thr Glu Gly Pro Cys Pro Ala Cys Trp Gly Ala 20 25 30
Ile Phe Asp Leu Glu Ser Gin Arg Glu Leu Leu Leu Asp Leu Ala Lys 35 40 45Ile Phe Asp Leu Glu Ser Gin Arg Glu Leu Leu Leu Asp Leu Ala Lys 35 40 45
Lys Ser Ile Leu Asp Lys Leu His Leu Ser Gin Arg Pro Ile Leu Ser 50 55 60Lys Ser Ile Leu Asp Lys Leu His Leu Ser Gin Arg Pro Ile Leu Ser 50 55 60
Arg Pro Val Ser Arg Gly Ala Leu Lys Thr Ala Leu Gin Arg Leu Arg 65 70 75 80Arg Pro Val Ser Arg Gly Ala Leu Lys Thr Ala Leu Gin Arg Leu Arg 65 70 75 80
Gly Pro Arg Arg Glu Thr Leu Leu Glu His Asp Gin Arg Gin Glu GluGly Pro Arg Arg Glu Thr Leu Leu Glu His Asp Gin Arg Gin Glu Glu
85 90 9585 90 95
Tyr Glu Ile Ile Ser Phe Ala Asp Thr Asp Leu Ser Ser Ile Asn Gin 100 105 110Tyr Glu Ile Ile Ser Phe Ala Asp Thr Asp Leu Ser Ser Ile Asn Gin 100 105 110
Thr Arg Leu Glu Phe His Phe Ser Gly Arg Met Ala Ser Gly Met Glu 115 120 125Thr Arg Leu Glu Phe His Phe Ser Gly Arg Met Ala Ser Gly Met Glu 115 120 125
Val Arg Gin Thr Arg Phe Met Phe Phe Val Gin Phe Pro His Asn Ala 130 135 140Val Arg Gin Thr Arg Phe Met Phe Phe Val Gin Phe Pro His Asn Ala 130 135 140
Thr Gin Thr Met Asn Ile Arg Val Leu Val Leu Arg Pro Tyr Asp Thr 145 150 155 160Thr Gin Thr Met Asn Ile Arg Val Leu Val Leu Arg Pro Tyr Asp Thr 145 150 155 160
Asn Leu Thr Leu Thr Ser Gin Tyr Val Val Gin Val Asn Ala Ser GlyAsn Leu Thr Leu Thr Ser Gin Tyr Val Val Gin Val Asn Ala Ser Gly
165 170 175165 170 175
ERSATZBLÄΓΓ (REGEL 26) Trp Tyr Gin Leu Leu Leu Gly Pro Glu Ala Gin Ala Ala Cys Ser Gin 180 185 190SPARE BLADES (RULE 26) Trp Tyr Gin Leu Leu Leu Gly Pro Glu Ala Gin Ala Ala Cys Ser Gin 180 185 190
Gly His Leu Thr Leu Glu Leu Val Pro Glu Ser Gin Val Ala His Ser 195 200 205Gly His Leu Thr Leu Glu Leu Val Pro Glu Ser Gin Val Ala His Ser 195 200 205
Ser Leu Ile Leu Gly Trp Phe Ser His Arg Pro Phe Val Ala Ala Gin 210 215 220Ser Leu Ile Leu Gly Trp Phe Ser His Arg Pro Phe Val Ala Ala Gin 210 215 220
Val Arg Val Glu Gly Lys His Arg Val Arg Arg Arg Gly Ile Asp Cys 225 230 235 240Val Arg Val Glu Gly Lys His Arg Val Arg Arg Arg Gly Ile Asp Cys 225 230 235 240
Gin Gly Gly Ser Arg Met Cys Cys Arg Gin Glu Phe Phe Val Asp PheGin Gly Gly Ser Arg Met Cys Cys Arg Gin Glu Phe Phe Val Asp Phe
245 250 255245 250 255
Arg Glu Ile Gly Trp Asn Asp Trp Ile Ile Gin Pro Glu Gly Tyr Ala 260 265 270Arg Glu Ile Gly Trp Asn Asp Trp Ile Ile Gin Pro Glu Gly Tyr Ala 260 265 270
Met Asn Phe Cys Thr Gly Gin Cys Pro Leu His Val Ala Gly Met Pro 275 280 285Met Asn Phe Cys Thr Gly Gin Cys Pro Leu His Val Ala Gly Met Pro 275 280 285
Gly Ile Ser Ala Ser Phe His Thr Ala Val Leu Asn Leu Leu Lys Ala 290 295 300Gly Ile Ser Ala Ser Phe His Thr Ala Val Leu Asn Leu Leu Lys Ala 290 295 300
Asn Ala Ala Ala Gly Thr Thr Gly Arg Gly Ser Cys Cys Val Pro Thr 305 310 315 320Asn Ala Ala Ala Gly Thr Thr Gly Arg Gly Ser Cys Cys Val Pro Thr 305 310 315 320
Ser Arg Arg Pro Leu Ser Leu Leu Tyr Tyr Asp Arg Asp Ser Asn IleSer Arg Arg Pro Leu Ser Leu Leu Tyr Tyr Asp Arg Asp Ser Asn Ile
325 330 335325 330 335
Val Lys Thr Asp Ile Pro Asp Met Val Val Glu Ala Cys Gly Cys Ser 340 345 350Val Lys Thr Asp Ile Pro Asp Met Val Val Glu Ala Cys Gly Cys Ser 340 345 350
(2) ANGABEN ZU SEQ ID NO: 5:(2) INFORMATION ON SEQ ID NO: 5:
(i) SEQUENZKENNZEICHEN:(i) SEQUENCE LABEL:
(A) LÄNGE: 18 Basenpaare(A) LENGTH: 18 base pairs
(B) ART: Nucleotid(B) TYPE: nucleotide
(C) STRANGFORM: Doppelstrang(C) STRAND FORM: double strand
(D) TOPOLOGIE: linear (vi) URSPRÜNGLICHE HERKUNFT:(D) TOPOLOGY: linear (vi) ORIGINAL ORIGIN:
(A) ORGANISMUS : Homo sapiens (ix) MERKMAL:(A) ORGANISM: Homo sapiens (ix) FEATURE:
(A) NAME/SCHLÜSSEL: exon(A) NAME / KEY: exon
(B) LAGE:1..3 (ix) MERKMAL:(B) LOCATION: 1..3 (ix) FEATURE:
(A) NAME/SCHLÜSSEL: intron(A) NAME / KEY: intron
(B) LAGE:4..18(B) LOCATION: 4..18
(xi) SEQUENZBESCHREIBUNG: SEQ ID NO: 5: CAGGTAGGTC CATGGTCG 18(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 5: CAGGTAGGTC CATGGTCG 18
(2) ANGABEN ZU SEQ ID NO: 6 :(2) INFORMATION ON SEQ ID NO: 6:
(i) SEQUENZKENNZEICHEN:(i) SEQUENCE LABEL:
(A) LÄNGE: 18 Basenpaare(A) LENGTH: 18 base pairs
(B) ART: Nucleotid(B) TYPE: nucleotide
(C) STRANGFORM: Doppelstrang(C) STRAND FORM: double strand
(D) TOPOLOGIE: linear (vi) URSPRÜNGLICHE HERKUNFT:(D) TOPOLOGY: linear (vi) ORIGINAL ORIGIN:
(A) ORGANISMUS: Homo sapiens (ix) MERKMAL:(A) ORGANISM: Homo sapiens (ix) FEATURE:
(A) NAME/SCHLÜSSEL: intron(A) NAME / KEY: intron
(B) LAGE:1..15 (ix) MERKMAL:(B) LOCATION: 1..15 (ix) FEATURE:
(A) NAME/SCHLÜSSEL: exon(A) NAME / KEY: exon
(B) LAGE:16..18(B) LOCATION: 16..18
(xi) SEQUENZBESCHREIBUNG: SEQ ID NO: 6: CTTGATTTTT AACAGACC 18(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 6: CTTGATTTTT AACAGACC 18
ERSÄΓZBLAΓT (REGEL 26) ERSÄΓZBLAΓT (RULE 26)

Claims

Patentansprüche Claims
DNA-Molekül, das für ein Protein der TGF-ß-Familie codiert undDNA molecule coding for a protein of the TGF-ß family and
(a) den für das reife Protein codierenden Anteil und gegebenenfalls weitere funktioneile Anteile der in SEQ ID NO.l gezeigten Nukleotidsequenz,(a) the portion coding for the mature protein and optionally further functional portions of the nucleotide sequence shown in SEQ ID NO.1,
(b) eine der Sequenz aus (a) im Rahmen der Degeneration des genetischen Codes entsprechende Nukleotidse¬ quenz,(b) a nucleotide sequence corresponding to the sequence from (a) in the context of the degeneration of the genetic code,
(c) eine einem allelischen Derivat einer der Sequenzen aus (a) und (b) entsprechende Nukleotidsequenz, oder(c) a nucleotide sequence corresponding to an allelic derivative of one of the sequences from (a) and (b), or
(d) eine von der Sequenz (a) aufgrund ihrer Herkunft aus anderen Wirbeltieren abweichende Sequenz,(d) a sequence which differs from sequence (a) due to its origin from other vertebrates,
(e) eine mit einer der Sequenzen aus (a) , (b) , (c) oder(e) one with one of the sequences from (a), (b), (c) or
(d) hybridisierende Nukleotidsequenz umfaßt unter der Voraussetzung, daß ein DNA-Molekül gemäß (d) zumindest den für ein reifes Protein der TGF-ß-Familie codierenden Anteil vollständig enthält.(d) Hybridizing nucleotide sequence includes provided that a DNA molecule according to (d) contains at least the portion coding for a mature protein of the TGF-ß family.
: . DNA-Molekül nach Anspruch 1, dadurch gekennzeichnet, daß es neben einem der Anteile (a) bis (e) von Anspruch 1 eine Nukleinsäuresequenz aufweist, die für zumindest einen Teil eines anderen Proteins codiert und so ange¬ ordnet ist, daß sich nach Expression ein Fusionsprotein ergibt .:. DNA molecule according to claim 1, characterized in that, in addition to one of the parts (a) to (e) of claim 1, it has a nucleic acid sequence which codes for at least part of another protein and is arranged in such a way that after expression gives a fusion protein.
;. Vektor, dadurch gekennzeichnet, daß er mindestens eine Kopie eines DNA-Moleküls nach;. Vector, characterized in that it has at least one copy of a DNA molecule
Anspruch 1 oder 2 enthält .Claim 1 or 2 contains.
4. Wirtszelle, dadurch gekennzeichnet, daß sie mit einer DNA nach Anspruch 1 oder 2 oder einem Vektor nach Anspruch 3 transformiert ist.4. host cell, characterized in that it is transformed with a DNA according to claim 1 or 2 or a vector according to claim 3.
5. Wirtszelle nach Anspruch 4, dadurch gekennzeichnet, daß sie ein Bakterium, ein Pilz, eine pflanzliche oder eine tierische Zelle ist.5. Host cell according to claim 4, characterized in that it is a bacterium, a fungus, a plant or an animal cell.
6. Protein der TGF-ß-Familie, das von einer DNA Sequenz nach Anspruch 1 oder 2 codiert wird.6. Protein of the TGF-ß family, which is encoded by a DNA sequence according to claim 1 or 2.
7. Protein nach Anspruch 6, dadurch gekennzeichnet, daß es die in SEQ ID NO.2 oder SEQ ID NO.4 gezeigte Aminosäuresequenz oder gegebenenfalls funktioneile Anteile davon aufweist.7. Protein according to claim 6, characterized in that it has the amino acid sequence shown in SEQ ID NO.2 or SEQ ID NO.4 or optionally functional parts thereof.
8. Chimäres Protein, dadurch gekennzeichnet, daß es ein Protein gemäß Anspruch 6 oder 7 und zumindest einen Teil eines anderen Proteins enthält.8. Chimeric protein, characterized in that it contains a protein according to claim 6 or 7 and at least part of another protein.
9. Heterodimeres Protein, dadurch gekennzeichnet, daß es aus einem Monomer eines Proteins gemäß Anspruch 6, 7 oder 8 und einem Monomer eines anderen Proteins aus der Superfamilie mit "Cystine Knot Motif" besteht.9. heterodimeric protein, characterized in that it consists of a monomer of a protein according to claim 6, 7 or 8 and a monomer of another protein from the superfamily with "cystine knot motif".
10. Verfahren zur Herstellung eines Proteins gemäß einem der Ansprüche 6 bis 8, dadurch gekennzeichnet, daß man eine Wirtszelle nach Anspruch 4 oder 5 kulti¬ viert und das Protein aus der Zelle oder/und dem Kultur¬ überstand gewinnt.10. A method for producing a protein according to any one of claims 6 to 8, characterized in that cultivates a host cell according to claim 4 or 5 and the protein from the cell and / or the culture supernatant is obtained.
11. Verfahren zur Herstellung eines heterodimeren Proteins gemäß Anspruch 9, dadurch gekennzeichnet, daß man eine Coexpression beider Monomere in einer Wirtszelle durchführt.11. A method for producing a heterodimeric protein according to claim 9, characterized in that the two monomers are co-expressed in a host cell.
12. Verfahren zur Herstellung eines heterodimeren Proteins gemäß Anspruch 9, dadurch gekennzeichnet, daß man eine gemeinsame Renaturierung von Einschlußkör¬ pern beider Monomere bewirkt.12. A method for producing a heterodimeric protein according to claim 9, characterized in that one brings about a common renaturation of inclusion bodies of both monomers.
13. Pharmazeutische Zusammensetzung, dadurch gekennzeichnet, daß sie mindestens ein Protein nach einem der Ansprüche 6 bis 9 als Wirkstoff gegebenenfalls zusammen mit phar¬ mazeutisch üblichen Träger-, Hilfs-, Verdünnungs- oder Füllstoffen enthält.13. Pharmaceutical composition, characterized in that it contains at least one protein according to one of claims 6 to 9 as an active ingredient, optionally together with pharmaceutically customary carriers, auxiliaries, diluents or fillers.
14. Pharmazeutische Zusammensetzung nach Anspruch 13 zur Behandlung oder Prävention von Knochen-, Knorpel-, Bindegewebs-, Haut-, Schleimhaut-, Endothel-, Epithe- lial-, Neuronal-, Hirn-, Renal- oder Zahnschädigungen, zur Anwendung bei Zahnimplantaten, zur Anwendung in Wundheilungs- oder Gewebewiederherstellungsprozessen, als Morphogen zum Einsatz zur Induktion von Lebergewebe- Wachstum, Induktion der Proliferation von Vorläufer¬ zellen oder Knochenmarkszellen, zur Beibehaltung eines Differenzierungszustandes und zur Behandlung von Ferti- litätsstörungen oder zur Empfängnisverhütung, oder zur Behandlung von StoffWechselerkrankungen.14. Pharmaceutical composition according to claim 13 for the treatment or prevention of bone, cartilage, connective tissue, skin, mucous membrane, endothelium, epithelial, neuronal, brain, renal or tooth damage, for use in dental implants , for use in wound healing or tissue restoration processes, as a morphogen for use for inducing liver tissue growth, inducing the proliferation of precursor cells or bone marrow cells, for maintaining a differentiated state and for treating fertility disorders or for contraception, or for treating metabolic disorders .
15. Anti-sense RNA, dadurch gekennzeichnet, daß sie komplementär zu einem Teil eines DNA-Moleküls gemäß Anspruch 1 ist.15. Anti-sense RNA, characterized in that it is complementary to part of a DNA molecule according to claim 1.
16. Ribozym, dadurch gekennzeichnet,16. Ribozyme, characterized in
ERSÄΓZBLÄΓT (REGEL 26) daß es ein RNA-Molekül, das man nach Transkription eines DNA-Moleküls nach Anspruch 1 erhält, spezifisch spaltet.ERSÄΓZBLÄΓT (RULE 26) that it specifically cleaves an RNA molecule obtained after transcription of a DNA molecule according to claim 1.
17. Verwendung einer Antisense-RNA gemäß Anspruch 15 oder eines Ribozyms gemäß Anspruch 16 zur Blockierung der Expression eines Proteins gemäß einem der Ansprüche 6 und 7.17. Use of an antisense RNA according to claim 15 or a ribozyme according to claim 16 for blocking the expression of a protein according to one of claims 6 and 7.
18. Verwendung einer DNA-Sequenz gemäß Anspruch 1 oder 2 oder eines Vektors gemäß Anspruch 3 zur in vitro oder in vivo Transfektion von Patientenzellen.18. Use of a DNA sequence according to claim 1 or 2 or a vector according to claim 3 for in vitro or in vivo transfection of patient cells.
19. Antikörper oder Antikörperfragmente, dadurch gekennzeichnet, daß sie an ein Protein nach einem der Ansprüche 6 bis 9 binden.19. Antibodies or antibody fragments, characterized in that they bind to a protein according to one of claims 6 to 9.
20 . Rezeptor, dadurch gekennzeichnet, daß ein Protein gemäß einem der Ansprüche 6 und 7 spezi¬ fisch an ihn bindet . 20th Receptor, characterized in that a protein according to one of claims 6 and 7 binds specifically to it.
PCT/EP1995/002552 1994-07-01 1995-06-30 NOVEL GROWTH OR DIFFERENTIATION FACTOR OF THE TGF-β FAMILY WO1996001316A1 (en)

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CN1151758A (en) 1997-06-11
IL114397A0 (en) 1995-10-31
JPH10502527A (en) 1998-03-10
CN1110558C (en) 2003-06-04
JP3859703B2 (en) 2006-12-20
DE19580745D2 (en) 1999-03-11
AU2979895A (en) 1996-01-25

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