WO1997036583A1 - Inhibitors of farnesyl-protein transferase - Google Patents

Inhibitors of farnesyl-protein transferase Download PDF

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WO1997036583A1
WO1997036583A1 PCT/US1997/005170 US9705170W WO9736583A1 WO 1997036583 A1 WO1997036583 A1 WO 1997036583A1 US 9705170 W US9705170 W US 9705170W WO 9736583 A1 WO9736583 A1 WO 9736583A1
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unsubstituted
substituted
alkyl
compound
hydrogen
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PCT/US1997/005170
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French (fr)
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Jeffrey Bergman
Christopher Dinsmore
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Merck & Co., Inc.
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Priority claimed from GBGB9610654.7A external-priority patent/GB9610654D0/en
Application filed by Merck & Co., Inc. filed Critical Merck & Co., Inc.
Priority to EP97917711A priority Critical patent/EP0959883A4/en
Priority to AU25968/97A priority patent/AU715604B2/en
Priority to JP9535483A priority patent/JP2000507584A/en
Publication of WO1997036583A1 publication Critical patent/WO1997036583A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D231/00Heterocyclic compounds containing 1,2-diazole or hydrogenated 1,2-diazole rings
    • C07D231/02Heterocyclic compounds containing 1,2-diazole or hydrogenated 1,2-diazole rings not condensed with other rings
    • C07D231/10Heterocyclic compounds containing 1,2-diazole or hydrogenated 1,2-diazole rings not condensed with other rings having two or three double bonds between ring members or between ring members and non-ring members
    • C07D231/12Heterocyclic compounds containing 1,2-diazole or hydrogenated 1,2-diazole rings not condensed with other rings having two or three double bonds between ring members or between ring members and non-ring members with only hydrogen atoms, hydrocarbon or substituted hydrocarbon radicals, directly attached to ring carbon atoms
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P13/00Drugs for disorders of the urinary system
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P13/00Drugs for disorders of the urinary system
    • A61P13/12Drugs for disorders of the urinary system of the kidneys
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P25/00Drugs for disorders of the nervous system
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P25/00Drugs for disorders of the nervous system
    • A61P25/02Drugs for disorders of the nervous system for peripheral neuropathies
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P27/00Drugs for disorders of the senses
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P27/00Drugs for disorders of the senses
    • A61P27/02Ophthalmic agents
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P31/00Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P31/00Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
    • A61P31/12Antivirals
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P35/00Antineoplastic agents
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D213/00Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members
    • C07D213/02Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members having three double bonds between ring members or between ring members and non-ring members
    • C07D213/04Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members having three double bonds between ring members or between ring members and non-ring members having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen or carbon atoms directly attached to the ring nitrogen atom
    • C07D213/24Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members having three double bonds between ring members or between ring members and non-ring members having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen or carbon atoms directly attached to the ring nitrogen atom with substituted hydrocarbon radicals attached to ring carbon atoms
    • C07D213/54Radicals substituted by carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals
    • C07D213/57Nitriles
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D233/00Heterocyclic compounds containing 1,3-diazole or hydrogenated 1,3-diazole rings, not condensed with other rings
    • C07D233/54Heterocyclic compounds containing 1,3-diazole or hydrogenated 1,3-diazole rings, not condensed with other rings having two double bonds between ring members or between ring members and non-ring members
    • C07D233/56Heterocyclic compounds containing 1,3-diazole or hydrogenated 1,3-diazole rings, not condensed with other rings having two double bonds between ring members or between ring members and non-ring members with only hydrogen atoms or radicals containing only hydrogen and carbon atoms, attached to ring carbon atoms
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D249/00Heterocyclic compounds containing five-membered rings having three nitrogen atoms as the only ring hetero atoms
    • C07D249/02Heterocyclic compounds containing five-membered rings having three nitrogen atoms as the only ring hetero atoms not condensed with other rings
    • C07D249/081,2,4-Triazoles; Hydrogenated 1,2,4-triazoles

Definitions

  • the present invention relates to compounds which inhibit farnesyl protein transferase, a protein which is implicated in the oncogenic pathway mediated by Ras.
  • the Ras proteins (Ha-Ras, Ki4a-Ras, Ki4b-Ras and N-Ras) are part of a signalling pathway that links cell surface growth factor receptors to nuclear signals initiating cellular proliferation.
  • Biological and biochemical studies of Ras action indicate that Ras functions like a G-regulatory protein. In the inactive state, Ras is bound to GDP. Upon growth factor receptor activation Ras is induced to exchange GDP for GTP and undergoes a conformational change. The GTP-bound form of Ras propagates the growth stimulatory signal until the signal is terminated by the intrinsic
  • Ras GTPase activity of Ras, which returns the protein to its inactive GDP bound form (D.R. Lowy and D.M. Willumsen, Ann. Rev. Biochem. 62:851 -891 (1993)).
  • Mutated ras genes (Ud' -ras, Ki4a-/ y, Ki4b-r ⁇ and N-ras) are found in many human cancers, including colorectal carcinoma, exocrine pancreatic carcinoma, and myeloid leukemias. The protein products of these genes are defective in their GTPase activity and constitutively transmit a growth stimulatory signal. Ras must be localized to the plasma membrane for both normal and oncogenic functions.
  • Ras C-terminus contains a sequence motif termed a "CAAX” or "Cys-Aaa ⁇ -Aaa ⁇ -Xaa” box (Cys is cysteine, Aaa is an aliphatic amino acid, the Xaa is any amino acid) (Willumsen et al., Nature 370:583-586 (1984)).
  • this motif serves as a signal sequence for the enzymes famesyl-protein transferase or geranylgeranyl -protein transferase, which catalyze the alkylation of the cysteine residue of the CAAX motif with a C15 or C20 isoprenoid, respectively.
  • Ras proteins are known to undergo post-translational famesylation.
  • famesylated proteins include the Ras-related GTP-binding proteins such as Rho, fungal mating factors, the nuclear lamins, and the gamma subunit of transducin. James, et al., J. Biol. Chem. 269, 14182 (1994) have identified a peroxisome associated protein Pxf which is also famesyl ⁇ ated. James, et al., have also suggested that there are famesylated proteins of unknown structure and function in addition to those listed above. Inhibition of famesyl-protein transferase has been shown to block the growth of Ras-transformed cells in soft agar and to modify other aspects of their transformed phenotype.
  • Famesyl-protein transferase utilizes farnesyl pyrophosphate to covalently modify the Cys thiol group of the Ras CAAX box with a fa esyl group (Reiss et al., Cell, 62:81 -88 (1990); Schaber et al., J. Biol. Chem.. 265: 14701 - 14704 ( 1990); Schafer et al., Science, 249: 1 133- 1 139 ( 1990); Manne et ai, Proc. Natl. Acad. Sci USA, 87:7541 -1545 ( 1990)).
  • Inhibition of famesyl pyrophosphate biosynthesis by inhibiting HMG-CoA reductase blocks Ras membrane localization in cultured cells. However, direct inhibition of famesyl-protein transferase would be more specific, and thus preferable.
  • FPTase famesyl-protein transferase
  • FPP famesyl diphosphate
  • Ras protein substrates
  • the peptide derived inhibitors that have been described are generally cysteine containing molecules that are related to the CAAX motif that is the signal for protein prenylation.
  • Such inhibitors may inhibit protein prenylation while serving as altemate substrates for the famesyl-protein transferase enzyme, or may be purely competitive inhibitors (U.S. Patent 5,141 ,851 , University of Texas; N.E. Kohl et al., Science, 260: 1934- 1937 ( 1993); Graham, et al., J. Med. Chem., 37, 725 (1994)).
  • FPT-ase inhibitors also inhibit the proliferation of vascular smooth muscle cells and are therefore useful in the prevention and treatment of arteriosclerosis and diabetic disturbance of blood vessels (JP H7-1 12930). It has recently been disclosed that certain tricyclic compounds which optionally incorporate a piperidine moiety are inhibitors of FPTase (WO 95/10514, WO 95/10515 and WO 95/10516). Imidazole-containing inhibitors of famesyl protein transferase have also been disclosed (WO 95/09001 and EP 0 675 1 12 Al ).
  • Rl a, R ib an d R2 are independently selected from the group consisting of: hydrogen, aryl, heterocyclyl, C3-C] 0 cycloalkyl, C2-C6 alkenyl, C2-C6 alkynyl, R 0-, R 9 S(0) m -,
  • RK NC(0)-, R C(0)NR 8 -, CN, N02, (R 8 )2NC(NR 8 )-, R 8 C(0)-, R 8 OC(0)-, N3, -N(R )2, R 9 OC(0)NR 8 - and Cl -C6 alkyl, unsubstituted or substituted by 1 -3 groups selected from the group consisting of: halo, aryl, heterocyclyl, C3-C10 cycloalkyl, C2-C alkenyl, C2-C6 alkynyl, R 8 0-, R9s(0) m -, R 8 C(0)NR 8 -, CN, (R 8 )2NC(NR 8 )-, R 8 C(0)-, R 8 OC(0)-, N3, -N(R 8 )2 and R 9 OC(0)NR 8 -;
  • R3 and R ⁇ are independently selected from the group consisting of: H, F, Cl, Br, -NR 8 2, CF3. NO2, R 8 0-, R 9 S(0) m -, (R*) 2 NC(0)-, R 8 C(0)NH-, H2NC(NH)-, R 8 C(0)-, R 8 OC(0)-, N3, CN, R 9 0C(0)NR 8 -, C1 -C20 alkyl, substituted or unsubstituted aryl and substituted or unsubstituted heterocyclyl;
  • A3 is selected from: -NR ⁇ S(0) m - or -S(0) m NR5-, with m equal to 0, 1 or 2, and R5 selected from the group consisting of: hydrogen, unsubstituted or substituted aryl, unsubstituted or substituted heterocyclyl, unsubstituted or substituted C3-C10 cycloalkyl, and C1 -C6 alkyl, unsubstituted or substituted with 1 -3 members selected from the group consisting of: unsubstituted or substituted aryl, unsubstituted or substituted heterocyclyl, unsubstituted or substituted C3-C 10 cycloalkyl, -N(R8)2, -CF3, -N ⁇ 2, (R 8 )0-, (R9)S(0) m -, (R 8 )C(0)NH-, H2NC(NH)- , (R 8 )C(0)-, (R 8 )OC(0)-, N3, CN and
  • R6 and R are independently selected from the group consisting of: hydrogen, aryl, heterocyclyl, C3-C10 cycloalkyl, C2-C6 alkenyl, C2-C6 alkynyl, Ci- 6 perfluoroalkyl, F, Cl, Br, R 8 0-, R9S(0) m -, R 8 C(0)NR 8 -, CN, N02, (R 8 )2NC(NR 8 )-, R 8 C(0)-, R OC(0)-, N3, -N(R 8 )2, R 9 OC(0)NR 8 - and C1 -C-6 alkyl unsubstituted or substituted by 1 -3 groups selected from: aryl, heterocyclyl, C3-C10 cycloalkyl, C2-C6 alkenyl, C2-C6 alkynyl, perfluoroalkyl, F, Cl, Br, R 8 0-, R 9 S(0) m -, R 8 C(0)NR*-, CN,
  • each R 8 is independently selected from hydrogen, C1 -C6 alkyl, aryl and aralkyl;
  • each R 9 is independently selected from C
  • X represents aryl or heteroaryl
  • V is selected from the group consisting of: hydrogen, heterocyclyl, aryl, C1 -C2O alkyl wherein from 0 to 4 carbon atoms are replaced with a heteroatoin selected from O, S, and N, and C2-C2O alkenyl, provided that V is not hydrogen if A* is S(0)m and V is not hydrogen if A is a bond, n is 0 and A 2 is S(0) m ;
  • W represents heterocyclyl
  • each n and p independently represents 0, 1 , 2, 3 or 4; r is 0 to 5, provided that r is 0 when V is hydrogen, and t is 0 or 1.
  • the compounds of this invention are useful in the inhibition of famesyl-protein transferase and the famesylation of the oncogene protein Ras, and thus are useful for the treatment of cancer.
  • the compounds of the present invention may have asymmetric centers and occur as racemates, racemic mixtures and as individual diastereomers, with all possible isomers, including optical isomers, being included in the present invention.
  • any variable e.g. aryl, heterocycle, Rl , R ⁇ etc.
  • alkyl and the alkyl portion of alkoxy. aralkyl and similar terms, is intended to include branched and straight-chain saturated aliphatic hydrocarbon groups having the specified number of carbon atoms, or 1 -6 carbon atoms if unspecified. Cycloalkyl means 1 -2 cabocyclic rings which are saturated and contain from 3- 10 atoms.
  • Halogen or “halo” as used herein means fluoro, chloro, bromo and iodo.
  • aryl and the aryl portion of aralkyl are intended to mean any stable monocyclic or bicyclic carbon ring of up to 7 members in each ring, wherein at least one ring is aromatic.
  • aryl elements examples include phenyl, naphthyl. tetrahydronaphthyl, indanyl, biphenyl, phenanthryl, anthryl or acenaphthyl.
  • a preferred aralkyl group is benzyl.
  • heterocyclyl, heterocycle and heterocyclic mean a 5- to 7-membered monocyclic or 8- to 1 1 - membered bicyclic heterocyclic rings, either saturated or unsaturated, aromatic, partially aromatic or non-aromatic, and which consist of carbon atoms and from one to four heteroatoms selected from the group consisting of N, O, and S.
  • it includes any bicyclic group in which any of the above-defined heterocyclic rings is fused to a benzene ring.
  • the ring or ring system may be attached at any heteroatom or carbon atom which results in a stable structure, and may contain 1 -3 carbonyl groups.
  • heterocycles include, but are not limited to, azepinyl, benzimidazolyl, benzisoxazolyl, benzofurazanyl, benzopyranyl, benzothiopyranyl, benzofuryl, benzothiazolyl, benzothienyl. benzoxazolyl, chromanyl, cinnolinyl, dihydrobenzofuryl.
  • Heteroaryl is a subset of heterocyclic, and means a monocyclic or bicyclic ring system, with up to 7 members in each ring, wherein at least one ring is aromatic and wherein from one to four carbon atoms are replaced by heteroatoms selected from the group consisting of N, O, and S.
  • Examples include benzimidazolyl, benzisoxazolyl, benzofurazanyl, benzopyranyl, benzothiopyranyl, benzofuryl, benzothiazolyl, benzothienyl, benzoxazolyl, chromanyl, cinnolinyl, dihydrobenzofuryl, dihydrobenzothienyl, dihydrobenzothiopyranyl, dihydrobenzothiopyranyl sulfone, furyl, imidazolyl, indolinyl, indolyl, isochromanyl, isoindohnyl, isoquinolinyl, isothiazolyl, naphthyridinyl, oxadiazolyl, pyridyl, pyrazinyl, pyrazolyl, pyridazinyl, pyrimidinyl, pyrrolyl, quinazolinyl, quinolinyl, quinoxal
  • substituted alkyl, substituted aryl, substituted heterocyclyl and substituted cycloalkyl mean alkyl, aryl, heterocyclyl and cycloalkyl groups, respectively, having from 1 -3 substituents which are selected from: halo, aryl, heterocyclyl, C3- 10 cycloalkyl, Ci - 6 alkyl, C 2 - 6 alkenyl, C 2 -6 alkynyl, R*0-, R 9 S(0) m -, R*C(0)NR*-, CN, (R*) 2 NC(NR*K R «C(0)-, R «OC(0)-, N3.
  • 1 -2 groups are present on substituted alkyl, substituted aryl, substituted heterocyclyl and substituted cycloalkyl, which are selected from: halo, aryl, R*0-, CN, R*C(0)- and -N(R*) 2 .
  • R l a , R ⁇ and R 2 are independently selected from: hydrogen, -N(R 8 )2, R 8 C(0)NR 8 - or unsubstituted or substituted Cl -C6 alkyl wherein the substituent on the substituted Cl -C6 alkyl is selected from unsubstituted or substituted aryl, -N(R )2, R 0- and R 8 C(0)NR 8 -
  • R3 and R 4 are selected from: hydrogen and Cl -C6 alkyl.
  • a 3 represents NR 5 S(0) , wherein m represents
  • R ⁇ represents hydrogen
  • represents hydrogen, unsubstituted or substituted Cl -C6 alkyl.
  • R 7 represents H or unsubstituted Ci - alkyl.
  • R x represents H or Ci -6 alkyl, and R 9 is Ci - alkyl.
  • a ⁇ and A 2 are independently selected from: a bond, -C(0)NR 8 -, -NR 8 C(0)-, -0-, -N(R 8 )-, -S(0)2N(R 8 )- and-
  • N(R 8 )S(0)2- Preferably X represents aryl and most preferably phenyl.
  • V is selected from hydrogen, heterocyclyl and aryl. More preferably V is phenyl.
  • W is heterocyclyl selected from imidazolinyl, imidazolyl, oxazolyl, pyrazolyl, pyyrolidinyl, thiazolyl and pyridyl. More preferably, W is selected from imidazolyl and pyridyl. Preferably, m is 2.
  • n and p are independently 0, 1 , 2 or 3.
  • t is 1.
  • R3, R4, A 3 , RK, Ry, m, n, p and r are as originally defined;
  • each Rl a and R is independently selected from hydrogen and Cl -C6 alkyl
  • each Rib i independently selected from: hydrogen, aryl, heterocyclyl, C3- 1 0 cycloalkyl, C 2- 6 alkenyl, R&0-, -N(R 8 )2 and Cl -C6 alkyl unsubstituted or substituted by aryl, heterocyclyl, cycloalkyl, alkenyl, R 0- and -N(R )2;
  • R5 is selected from the group consisting of: hydrogen and C1 -C6 alkyl, unsubstituted or substituted with 1 -3 members selected from the group consisting of: unsubstituted or substituted aryl, unsubstituted or substituted heterocyclyl, unsubstituted or substituted C3-C10 cycloalkyl, -N(R 8 )2, -CF3, -N ⁇ 2, (R 8 )0-, (R 9 )S(0) m -, (R )C(0)NH-, H2NC(NH)-, (R )C(0)-, (R )OC(0)-, N3, CN and (R 9 )OC(0)NR 8 -;
  • R6 is selected from: hydrogen, C ⁇ -C alkyl, C2-C6 alkenyl, C2-C6 alkynyl, C1 -C6 perfluoroalkyl, F, Cl, R 0-, R C(0)NR 8 -, CN, N02, (R 8 )2N-C(NR 8 )-, R C(0)-, R OC(0)-, -N(R )2, or R OC(0)NR 8 -, and Cl -C ⁇ alkyl substituted by Cl -C6 perfluoroalkyl, R 0-, R 8 C(0)NR 8 -, (R )2N-C(NR 8 )-, R C(0)-, R OC(0)-, -N(R )2 and R 9 OC(0)NR 8 -;
  • R 7 is hydrogen or unsubstituted C ⁇ _ 6 alkyl;
  • V is selected from: hydrogen; aryl; heterocyclyl selected from pyrrolidinyl, imidazolyl, pyridinyl, thiazolyl, pyridonyl, 2-oxopiperidinyl, indolyl, quinolinyl, isoquinolinyl and thienyl; C1 -C20 alkyl wherein from 0 to 4 carbon atoms are replaced with a a hetero- atom selected from O, S, and N, and C2-C2O alkenyl, provided that V is not hydrogen if A ⁇ is S(0)m and V is not hydrogen if A ⁇ is a bond and A2 is S(0) m .
  • a second subset of compounds of the present invention is represented by formula lb:
  • R la, Rib, R2, A ' , A 2 , R3, R4, R5, 6, RH , R ) , m> n , p an d r are as originally defined;
  • R7 is selected from: hydrogen and unsubstituted C1 -C6 alkyl
  • V is selected from: hydrogen, heterocyclyl selected from pyrrolidinyl, imidazolyl, pyridinyl, thiazolyl, pyridonyl, 2-oxopiperidinyl, indolyl, quinolinyl, isoquinolinyl, and thienyl, aryl, C1 -C2O alkyl wherein from 0 to 4 carbon atoms are replaced with a heteroatom selected from O, S, and N, and C2-C2O alkenyl, provided that V is not hydrogen if A 1 is S(0)m and V is not hydrogen if A 1 is a bond, n is 0 and A2 is S(0) m ; and
  • W represents heterocyclyl selected from pyrrolidinyl, pyridinyl, thiazolyl, pyridonyl, 2-oxopiperidinyl, indolyl, quinolinyl and isoquinolinyl.
  • each R is independently selected from hydrogen and
  • each R ⁇ is selected from: hydrogen and C] -C6 alkyl unsubstituted or substituted with 1 -3 groups selected from unsubstituted or substituted aryl, unsubstituted or substituted heterocyclyl, unsubstituted or substituted C3-C10 cycloalkyl, -N(R )2, -CF3, -N ⁇ 2, (R )0-, (R 9 )S(0) m -, (R 8 )C(0)NH-, H2NC(NH)-, (R )C(0)-, (R )OC(0)-, N3, -CN and (R 9 )OC(0)NR 8 -;
  • R6 is selected from the group consisting of: hydrogen. C1 -C6 alkyl, C2-C6 alkenyl, C2-C6 alkynyl, C
  • a fourth subset of compounds of the invention is represented by formula Id:
  • each R2 is independently selected from: hydrogen and Cl -C6 alkyl
  • R3 and R4 are independently selected from H, F, Cl, Br, N(R )2, CF3, N02, (R 8 )0-, (R 9 )S(0) m -, (R )C(0)NH-, H2N-C(NH)-, (R )C(0)-, (R )OC(0)-, N3, CN, (R 9 )OC(0)NR 8 -, C 1 -C20 alkyl, substituted or unsubstituted aryl, and substituted or unsubstituted heterocyclyl;
  • a 3 represents -NR5-S(0) m - or -S(0) m -NR5-
  • R5 is selected from: hydrogen and C 1 -C6 alkyl, unsubstituted or substituted witha group selected from unsubstituted or substituted aryl, unsubstituted or substituted heterocyclyl, unsubstituted or substituted C3-C10 cycloalkyl, N(R )2. CF3, NO2, (R 8 )0-, (R 9 )S(0) m -, (R )C(0)NH-, H2N-C(NH)-, (R )C(0)-, (R )OC(0)-, N3, CN (R 9 )OC(0)NR 8 -; and R 8 , R 9 > m and p are as originally defined.
  • the pharmaceutically acceptable salts of the compounds of this invention include the conventional non-toxic salts of the compounds of this invention as formed, e.g., from non-toxic inorganic or organic acids.
  • such conventional non-toxic salts include those derived from inorganic acids such as hydrochloric, hydrobromic, sulfuric, sulfamic, phosphoric, nitric and the like: and the salts prepared from organic acids such as acetic, propionic, succinic, glycolic, stearic, lactic, malic, tartaric, citric, ascorbic, pamoic, maleic, hydroxymaleic, phenylacetic, glutamic, benzoic, salicylic, sulfanilic, 2-acetoxy-benzoic, fumaric, toluenesulfonic, methanesulfonic, ethane disulfonic, oxalic, isethionic, trifluoroacetic and the like.
  • the pharmaceutically acceptable salts of the compounds of this invention can be synthesized from the compounds of this invention which contain a basic moiety by conventional chemical methods.
  • the salts are prepared either by ion exchange chromatography or by reacting the free base with stoichiometric amounts or with an excess of the desired salt-forming inorganic or organic acid in a suitable solvent or various combinations of solvents.
  • Reactions used to generate the compounds of this invention are prepared by employing reactions as shown in Schemes 1 - 7, in addition to other standard manipulations such as ester hydrolysis, cleavage of protecting groups, etc., as may be known in the literature or exemplified in the experimental procedures.
  • Substituents R and R CH2-, as shown in the Schemes represent the substituents R 8 , R 9 and others, depending on the compound of the instant invention that is being synthesized.
  • the variable p' represents p-1.
  • the sulfinamide can be formed by converting a hydroxyl group to a sulfinyl chloride, and then reacting the sulfinyl chloride with the appropriately substituted amine.
  • the resulting sulfinamide can thereafter be oxidized with, e.g., periodate, to produce sulfonamides in accordance with formula I.
  • substitution on the sulfonamide nitrogen atom can be realized.
  • the instant compounds are useful in the treatment of cancer.
  • Cancers which may be treated with the compounds of this invention include, but are not limited to, colorectal carcinoma, exocrine pancreatic carcinoma, myeloid leukemias and neurological tumors.
  • Such tumors may arise by mutations in the ras genes themselves, mutations in the proteins that can regulate Ras activity (i.e., neurofibromin (NF-1 ), neu. scr, abl , lck, fyn) or by other mechanisms.
  • the compounds of the instant invention inhibit farnesyl- protein transferase and famesylation of the oncogene protein Ras.
  • the instant compounds may also inhibit tumor angiogenesis, thereby affecting the growth of tumors (J. Rak et al. Cancer Research, 55:4575- 4580 (1995)).
  • Such anti-angiogenic properties of the instant compounds may also be useful in the treatment of certain forms of blindness related to retinal vascularization.
  • the compounds of this invention are also useful for inhibiting other diseases where Ras proteins are aberrantly activated as a result of oncogenic mutation in other genes (i.e., the Ras gene itself is not activated by mutation to an oncogenic form) with said inhibition being accomplished by the administration of an effective amount of the compounds of the invention to a mammal in need of such treatment.
  • a component of NF-1 is a benign proliferative disorder.
  • the instant compounds may also be useful in the treatment of viral infections, in particular in the treatment of hepatitis delta and related viruses (J.S. Glenn et al. Science, 256: 1331 - 1 33 ( 1992).
  • the compounds of the instant invention are also useful in the prevention of restenosis after percutaneous transluminal coronary angioplasty by inhibiting neointimal formation (C. Indolfi et al. Nature medicine, 1 :541-545(1995).
  • the instant compounds may also be useful in the treatment and prevention of polycystic kidney disease (D.L. Schaffner et al. American Journal of Pathology, 142: 1051 - 1060 (1993) and B. Cowley, Jr. et d ' l.FASEB Journal, 2:A3160 ( 1988)).
  • the instant compounds may also be useful for the treatment of fungal infections.
  • the compounds of this invention may be administered to mammals, preferably humans, either alone or, preferably, in combina- tion with pharmaceutically acceptable carriers or diluents, in the form of a pharmaceutical composition, which is comprised of a compound of formula I in combination with a pharmaceutically acceptable carrier.
  • the compounds can be administered orally, topically, rectally, vaginally transdermally or parenterally, including the intravenous, intramuscular, intraperitoneal and subcutaneous routes of administration.
  • the compound is administered, for example, in the form of tablets or capsules, or as a solution or suspension.
  • carriers which are commonly used include lactose and corn starch; lubricating agents, such as magnesium stearate, are commonly added.
  • diluents also include lactose and dried corn starch.
  • aqueous suspensions are required for oral use, the active ingredient is combined with emulsifying and suspending agents. If desired, certain sweetening and/or flavoring agents may be added.
  • sterile solutions of the active ingredient are usually prepared, the pH of the solution is suitably adjusted and the product is buffered.
  • the total concentration is controlled to render the preparation substantially isotonic.
  • the compounds of the instant invention may also be co-administered with other well known therapeutic agents that are selected for their particular usefulness against the condition that is being treated.
  • the instant compounds may be useful in combination with known anti-cancer and cytotoxic agents.
  • the instant compounds may be useful in combination with agents that are effective in the treatment and prevention of NF- 1 , restinosis, polycystic kidney disease, infections of hepatitis delta and related viruses and fungal infections. If formulated as a fixed dose, such combination products employ a compound of this invention substantially within the dosage range described below and other pharmaceutically active agent(s) typically within the acceptable dosage range.
  • Compounds of the instant invention may alternatively be used sequentially with known pharma ⁇ ceutically acceptable agent(s) when a combination formulation is inappropriate.
  • the daily dosage will normally be determined by the prescribing physician, who may vary the dosage according to the age, weight, and response of the individual patient, as well as the severity of the patient's condition.
  • a suitable amount of compound is administered to a mammal undergoing treatment for cancer.
  • Administration occurs in an amount between about 0.1 mg/kg of body weight to about 60 mg/kg of body weight per day, preferably of between 0.5 mg/kg of body weight to about 40 mg/kg of body weight per day.
  • the compounds of the instant invention are also useful as a component in an assay to rapidly determine the presence and quantity of famesyl-protein transferase (FPTase) in a composition.
  • FPTase famesyl-protein transferase
  • the composition to be tested may be divided and the two portions contacted with mixtures which comprise a known substrate of FPTase (for example a tetrapeptide having a cysteine at the amine terminus) and famesyl pyrophosphate and, in one of the mixtures, a compound of the instant invention.
  • the chemical content of the assay mixtures may be determined by well known immuno- logical, radiochemical or chromatographic techniques. Because the compounds of the instant invention are selective inhibitors of FPTase, absence or quantitative reduction of the amount of substrate in the assay mixture without the compound of the instant invention relative to the presence of the unchanged substrate in the assay containing the instant compound is indicative of the presence of FPTase in the composition to be tested.
  • potent inhibitor compounds of the instant invention may be used in an active site titration assay to determine the quantity of enzyme in the sample.
  • a series of samples composed of aliquots of a tissue extract containing an unknown amount of farnesyl- protein transferase, an excess amount of a known substrate of FPTase (for example a tetrapeptide having a cysteine at the amine terminus) and famesyl pyrophosphate are incubated for an appropriate period of time in the presence of varying concentrations of a compound of the instant invention.
  • concentration of a sufficiently potent inhibitor i.e., one that has a Ki substantially smaller than the concentration of enzyme in the assay vessel
  • concentration of a sufficiently potent inhibitor i.e., one that has a Ki substantially smaller than the concentration of enzyme in the assay vessel
  • Step A Preparation of l -triphenylmethyl-4-(hydroxymethyl)imidazole
  • Step C Preparation of l -(4-cyanobenzyl)-5-(acetoxymethyl)imidazole hydrobromide
  • a solution of -the product from Step B (85.8 g, 225 mmol) and ⁇ -bromo-/?-tolunitrile (50.1 g, 232 mmol) in 500 mL of EtOAc was stirred at 60°C for 20 hours, during which a pale yellow precipitate formed.
  • the reaction was cooled to room temperature and filtered to provide the solid imidazolium bromide salt.
  • the filtrate was concentrated in vacuo to a volume 200 mL, reheated at 60°C for two hours, cooled to room temperature, and filtered again.
  • the filtrate was concentrated in vacuo to a volume 100 mL, reheated at 60°C for another two hours, cooled to room temperature, and concentrated in vacuo to provide a pale yellow solid. All of the solid material was combined, dissolved in 500 mL of methanol, and warmed to 60 °C. After two hours, the solution was reconcentrated in vacuo to provide a white solid which was triturated with hexane to remove soluble materials. Removal of residual solvents in vacuo provided the titled product hydrobromide as a white solid (50.4 g, 67% yield, 89% purity by HPLC) which was used in the next step without further purification.
  • Step D Preparation of l -(4-cyanobenzyl)-5-(hydroxymethyl)imidazolc
  • Step E Preparation of l -(4-cyanobenzyl)-5-imidazolecarboxaldehyde To a solution of the alcohol from Step D (21.5 g, 101 mmol) in 500 mL of DMSO at room temperature was added triethyl ⁇ amine (56 mL, 402 mmol), then S ⁇ 3 -pyridine complex (40.5 g. 254 mmol).
  • Step F Preparation of l -(4-cyanobenzyl)-5-
  • Step I Preparation of N-[l -(4-cyanobenzyl)imidazolyl-5-methyl]- N-(methyl)-3-chlorobenzylsulfinamide To a 0° C solution of the sulfinyl chloride from Step H
  • Step J Preparation of N-[l -(4-cyanobenzyl)imidazolyl-5-methyJJ-
  • Step A Preparation of l -(4-chlorobenzyl)-5-imidazolylmethyl sulfinyl chloride
  • the titled compound is prepared from the alcohol from Step D of Example 1 by the methods described in Steps G and H of Example 1.
  • Step B Preparation of N-(3-chlorobenzyl)- l -[ (4-cyanobenzy!)-5- imidazoly 1 lmethylsulfinamide
  • Step C Preparation of N-(3-chlorobenzyl)-l-[(4-cyanobenzyl)-5- imidazolyllmethylsulfonamide hydrochloride
  • the sulfinamide from Step B is oxidized to the sulfonamide and converted to the HCI salt using the method described in Step J of Example 1.
  • Step A Preparation of 3-(4-cyanobenzyl)pyridin-4-carboxylic acid methyl ester
  • 4-cyanobenzyl bromide 625 mg, 3.27 mmol
  • dry THF 4mL
  • activated Zn dust; 250 mg
  • dry THF 2 mL
  • O 0 under an argon atmosphere
  • the ice-bath was removed and the slurry was stirred at room temperature for a further 30 min.
  • 3-bromopyridin-4- carboxylic acid methyl ester 540 mg. 2.5 mmol
  • dichlorobis(triphenylphos ⁇ hine)nickel II
  • Step B Preparation of 3-(4-cyanobenzy0-4-(hydroxymethy0pyridine The title compound was obtained by sodium borohydride
  • the title compound was obtained by activated manganese dioxide (l .Og) oxidation of the alcohol from Step B (240 mg, 1.07 mmol) in dioxane (10 mL) at reflux for 30 min. Filtration and evaporation of the solvent provided title compound, mp 80-83°C.
  • Step D Preparation of 3-(4-cyanobenzyl)-4- r(methyIamino)methyllpyridine
  • the titled compound is prepared from the pyridinal from
  • Step E Preparation of N-[3-(4-cyanobenzyl)pyridyl-4-methyl]-N- (methyl)-3-chlorobenzylsuIfonamide hydrochloride
  • the titled compound is prepared from the amine from Step D and the sulfinyl chloride from Step H of Example 1 using the procedures described in Steps I and J of Example 1.
  • Bovine FPTase was assayed in a volume of 100 ⁇ l containing 100 mM N-(2- hydroxy ethyl) piperazine-/V'-(2-ethane sulfonic acid) (HEPES), pH 7.4, 5 mM MgCl2, 5 mM dithiothreitol (DTT), 100 mM Hl-farnesyl diphosphate ( Hj-FPP; 740 CBq/mmol, New England Nuclear), 650 nM Ras-CVLS and 10 ⁇ g/ml FPTase at 31 °C for 60 min. Reactions were initiated with FPTase and stopped with 1 ml of 1.0 M HCL in ethanol.
  • Precipitates were collected onto filter-mats using a TomTec Mach II cell harvestor, washed with 100% ethanol, dried and counted in an LKB ⁇ -plate counter.
  • the assay was linear with respect to both substrates, FPTase levels and time; less than 10% of the H j-FPP was utilized during the reaction period.
  • Purified compounds were dissolved in 100% dimethyl sulfoxide (DMSO) and were diluted 20-fold into the assay. Percentage inhibition is measured by the amount of incorporation of radioactivity in the presence of the test compound when compared to the amount of incorporation in the absence of the test compound.
  • DMSO dimethyl sulfoxide
  • Human FPTase was prepared as described by Omer et al.. Biochemistry 32:5167-5176 ( 1993). Human FPTase activity was assayed as described above with the exception that 0.1 % (w/v) polyethylene glycol 20,000, 10 ⁇ M ZnCI 2 and 100 nM Ras-CVIM were added to the reaction mixture. Reactions were performed for 30 min., stopped with 100 ⁇ l of 30% (v/v) trichloroacetic acid (TCA) in ethanol and processed as described above for the bovine enzyme.
  • TCA trichloroacetic acid
  • the cell line used in this assay is a v-ras line derived from either Rat l or NIH3T3 cells, which expressed viral Ha-ras p21.
  • the assay is performed essentially as described in DeClue, J.E. et ai., Cancer Research 51 :712-717, (1991). Cells in 10 cm dishes at 50-75% confluency are treated with the test compound (final concentration of solvent, methanol or dimethyl sulfoxide, is 0.1 %).
  • the cells After 4 hours at 37°C, the cells are labelled in 3 ml methionine-free DMEM supple- meted with 10% regular DMEM, 2% fetal bovine serum and 400 mCi[35S]methionine (1000 Ci/mmol). After an additional 20 hours, the cells are lysed in 1 ml lysis buffer (1 % NP40/20 mM HEPES, pH 7.5/5 mM MgCl2/lmM DTT/10 mg/ml aprotinen/2 mg/ml leupeptin/2 mg/ml antipain/0.5 mM PMSF) and the lysates cleared by centrifugation at 100,000 x g for 45 min.
  • 1 ml lysis buffer (1 % NP40/20 mM HEPES, pH 7.5/5 mM MgCl2/lmM DTT/10 mg/ml aprotinen/2 mg/ml leupeptin/2 mg/ml antipain/0.5 mM PMSF
  • the immunoprecipitates are washed four times with IP buffer (20 nM HEPES, pH 7.5/1 mM EDTA/1 % Triton X- 100.0.5% deoxycholate/0.1 %/SDS/0.1 M NaCI) boiled in SDS-PAGE sample buffer and loaded on 13% acrylamide gels. When the dye front reached the bottom, the gel is fixed, soaked in Enlightening, dried and autoradiographed. The intensities of the bands corresponding to famesylated and nonfarnesylated ras proteins are compared to determine the percent inhibition of famesyl transfer to protein.
  • IP buffer 20 nM HEPES, pH 7.5/1 mM EDTA/1 % Triton X- 100.0.5% deoxycholate/0.1 %/SDS/0.1 M NaCI
  • Rat 1 cells transformed with either v-ras, v-raf, or v-mos are seeded at a density of 1 x 10 4 cells per plate (35 mm in diameter) in a 0.3% top agarose layer in medium A (Dulbecco's modified Eagle's medium supplemented with 10% fetal bovine serum) over a bottom agarose layer (0.6%). Both layers contain 0.1 % methanol or an appropriate concentration of the instant compound (dissolved in methanol at 1000 times the final concentration used in the assay).
  • the cells are fed twice weekly with 0.5 ml of medium A containing 0.1 % methanol or the concentration of the instant compound. Photomicro ⁇ graphs are taken 16 days after the cultures are seeded and comparisons are made.

Abstract

The present invention is directed to compounds which inhibit farnesyl-protein transferase (FTase) and the farnesylation of the oncogene protein Ras. The invention is further directed to chemotherapeutic compositions containing the compounds of this invention and methods for inhibiting farnesyl-protein transferase and the farnesylation of the oncogene protein Ras.

Description

-I
TITLE OF THE INVENTION
INHIBITORS OF FARNESYL-PROTEIN TRANSFERASE
BACKGROUND OF THE INVENTION The present invention relates to compounds which inhibit farnesyl protein transferase, a protein which is implicated in the oncogenic pathway mediated by Ras. The Ras proteins (Ha-Ras, Ki4a-Ras, Ki4b-Ras and N-Ras) are part of a signalling pathway that links cell surface growth factor receptors to nuclear signals initiating cellular proliferation. Biological and biochemical studies of Ras action indicate that Ras functions like a G-regulatory protein. In the inactive state, Ras is bound to GDP. Upon growth factor receptor activation Ras is induced to exchange GDP for GTP and undergoes a conformational change. The GTP-bound form of Ras propagates the growth stimulatory signal until the signal is terminated by the intrinsic
GTPase activity of Ras, which returns the protein to its inactive GDP bound form (D.R. Lowy and D.M. Willumsen, Ann. Rev. Biochem. 62:851 -891 (1993)). Mutated ras genes (Ud' -ras, Ki4a-/ y, Ki4b-røΛ and N-ras) are found in many human cancers, including colorectal carcinoma, exocrine pancreatic carcinoma, and myeloid leukemias. The protein products of these genes are defective in their GTPase activity and constitutively transmit a growth stimulatory signal. Ras must be localized to the plasma membrane for both normal and oncogenic functions. At least 3 post-translational modifications are involved with Ras membrane localization, and all 3 modifications occur at the C-terminus of Ras. The Ras C-terminus contains a sequence motif termed a "CAAX" or "Cys-Aaa^ -Aaa^-Xaa" box (Cys is cysteine, Aaa is an aliphatic amino acid, the Xaa is any amino acid) (Willumsen et al., Nature 370:583-586 (1984)). Depend- ing on the specific sequence, this motif serves as a signal sequence for the enzymes famesyl-protein transferase or geranylgeranyl -protein transferase, which catalyze the alkylation of the cysteine residue of the CAAX motif with a C15 or C20 isoprenoid, respectively. (S. Clarke.. Ann. Rev. Biochem. 7 :355-386 ( 1992); W.R. Schafer and J. Rine, Ann. Rev. Genetics 50:209-237 (1992)). Ras proteins are known to undergo post-translational famesylation. Other famesylated proteins include the Ras-related GTP-binding proteins such as Rho, fungal mating factors, the nuclear lamins, and the gamma subunit of transducin. James, et al., J. Biol. Chem. 269, 14182 (1994) have identified a peroxisome associated protein Pxf which is also famesyl¬ ated. James, et al., have also suggested that there are famesylated proteins of unknown structure and function in addition to those listed above. Inhibition of famesyl-protein transferase has been shown to block the growth of Ras-transformed cells in soft agar and to modify other aspects of their transformed phenotype. It has also been demonstrated that certain inhibitors of famesyl-protein transferase selectively block the processing of the Ras oncoprotein intracellularly (N.E. Kohl et al., Science, 260:1934-1937 (1993) and G.L. James et ai, Science, 260: 1937- 1942 ( 1993). Recently, it has been shown that an inhibitor of famesyl-protein transferase blocks the growth of ras- dependent tumors in nude mice (N.E. Kohl et al., Proc. Natl. Acad. Sci U.S.A., 97 :9141 -9145 (1994) and induces regression of mammary and salivary carcinomas in ras transgenic mice (N.E. Kohl et al., Nature Medicine, 1 :792-797 ( 1995).
Indirect inhibition of famesyl-protein transferase in vivo has been demonstrated with lovastatin (Merck & Co., Rahway, NJ) and compactin (Hancock et al., ibid; Casey et al., ibid; Schafer et al., Science 245:379 ( 1989)). These drugs inhibit HMG-CoA reductase, the rate limiting enzyme for the production of poly- isoprenoids including famesyl pyrophosphate. Famesyl-protein transferase utilizes farnesyl pyrophosphate to covalently modify the Cys thiol group of the Ras CAAX box with a fa esyl group (Reiss et al., Cell, 62:81 -88 (1990); Schaber et al., J. Biol. Chem.. 265: 14701 - 14704 ( 1990); Schafer et al., Science, 249: 1 133- 1 139 ( 1990); Manne et ai, Proc. Natl. Acad. Sci USA, 87:7541 -1545 ( 1990)). Inhibition of famesyl pyrophosphate biosynthesis by inhibiting HMG-CoA reductase blocks Ras membrane localization in cultured cells. However, direct inhibition of famesyl-protein transferase would be more specific, and thus preferable.
Inhibitors of famesyl-protein transferase (FPTase) have been described in two general classes. The first are analogs of famesyl diphosphate (FPP), while the second class of inhibitors is related to the protein substrates (e.g., Ras) for the enzyme. The peptide derived inhibitors that have been described are generally cysteine containing molecules that are related to the CAAX motif that is the signal for protein prenylation. (Schaber et al., ibid; Reiss et. ai, ibid; Reiss et al.. PNAS, <s?<J?:732-736 ( 1991 )). Such inhibitors may inhibit protein prenylation while serving as altemate substrates for the famesyl-protein transferase enzyme, or may be purely competitive inhibitors (U.S. Patent 5,141 ,851 , University of Texas; N.E. Kohl et al., Science, 260: 1934- 1937 ( 1993); Graham, et al., J. Med. Chem., 37, 725 (1994)).
It has recently been reported that FPT-ase inhibitors also inhibit the proliferation of vascular smooth muscle cells and are therefore useful in the prevention and treatment of arteriosclerosis and diabetic disturbance of blood vessels (JP H7-1 12930). It has recently been disclosed that certain tricyclic compounds which optionally incorporate a piperidine moiety are inhibitors of FPTase (WO 95/10514, WO 95/10515 and WO 95/10516). Imidazole-containing inhibitors of famesyl protein transferase have also been disclosed (WO 95/09001 and EP 0 675 1 12 Al ).
SUMMARY OF THE INVENTION
The present invention addresses a compound of formula I:
Figure imgf000005_0001
or a pharmaceutically acceptable salt thereof, wherein:
Rl a, R ib and R2 are independently selected from the group consisting of: hydrogen, aryl, heterocyclyl, C3-C] 0 cycloalkyl, C2-C6 alkenyl, C2-C6 alkynyl, R 0-, R9S(0)m-,
(RK) NC(0)-, R C(0)NR8-, CN, N02, (R8)2NC(NR8)-, R8C(0)-, R8OC(0)-, N3, -N(R )2, R9OC(0)NR8- and Cl -C6 alkyl, unsubstituted or substituted by 1 -3 groups selected from the group consisting of: halo, aryl, heterocyclyl, C3-C10 cycloalkyl, C2-C alkenyl, C2-C6 alkynyl, R80-, R9s(0)m-, R8C(0)NR8-, CN, (R8)2NC(NR8)-, R8C(0)-, R8OC(0)-, N3, -N(R8)2 and R9OC(0)NR8-;
R3 and R^ are independently selected from the group consisting of: H, F, Cl, Br, -NR82, CF3. NO2, R80-, R9S(0)m-, (R*)2NC(0)-, R8C(0)NH-, H2NC(NH)-, R8C(0)-, R8OC(0)-, N3, CN, R90C(0)NR8-, C1 -C20 alkyl, substituted or unsubstituted aryl and substituted or unsubstituted heterocyclyl;
A3 is selected from: -NR^S(0)m- or -S(0)mNR5-, with m equal to 0, 1 or 2, and R5 selected from the group consisting of: hydrogen, unsubstituted or substituted aryl, unsubstituted or substituted heterocyclyl, unsubstituted or substituted C3-C10 cycloalkyl, and C1 -C6 alkyl, unsubstituted or substituted with 1 -3 members selected from the group consisting of: unsubstituted or substituted aryl, unsubstituted or substituted heterocyclyl, unsubstituted or substituted C3-C 10 cycloalkyl, -N(R8)2, -CF3, -Nθ2, (R8)0-, (R9)S(0)m-, (R8)C(0)NH-, H2NC(NH)- , (R8)C(0)-, (R8)OC(0)-, N3, CN and (R9)OC(0)NR8-;
R6 and R are independently selected from the group consisting of: hydrogen, aryl, heterocyclyl, C3-C10 cycloalkyl, C2-C6 alkenyl, C2-C6 alkynyl, Ci-6 perfluoroalkyl, F, Cl, Br, R80-, R9S(0)m-, R8C(0)NR8-, CN, N02, (R8)2NC(NR8)-, R8C(0)-, R OC(0)-, N3, -N(R8)2, R9OC(0)NR8- and C1 -C-6 alkyl unsubstituted or substituted by 1 -3 groups selected from: aryl, heterocyclyl, C3-C10 cycloalkyl, C2-C6 alkenyl, C2-C6 alkynyl, perfluoroalkyl, F, Cl, Br, R80-, R9S(0)m-, R8C(0)NR*-, CN, (R8)2NC(NR8)-, R C(0)-, R8OC(0)-, N3, -N(R )2 and R9OC(0)NR8-;
each R8 is independently selected from hydrogen, C1 -C6 alkyl, aryl and aralkyl;
each R9 is independently selected from C| -C6 alkyl and aryl;
A 1 and A 2 are independently selected from the group consisting of: a bond, -CH=CH-, -C≡C-. -C(O)-, -C(0)NR8-, -NR C(0)-, -0-, -N(R8)-, -S(0)2N(R8)-. -N(R )S(0)2-, and S(0)m;
X represents aryl or heteroaryl;
V is selected from the group consisting of: hydrogen, heterocyclyl, aryl, C1 -C2O alkyl wherein from 0 to 4 carbon atoms are replaced with a heteroatoin selected from O, S, and N, and C2-C2O alkenyl, provided that V is not hydrogen if A* is S(0)m and V is not hydrogen if A is a bond, n is 0 and A 2 is S(0)m;
W represents heterocyclyl;
each n and p independently represents 0, 1 , 2, 3 or 4; r is 0 to 5, provided that r is 0 when V is hydrogen, and t is 0 or 1.
DETAILED DESCRIPTION OF THE INVENTION
The compounds of this invention are useful in the inhibition of famesyl-protein transferase and the famesylation of the oncogene protein Ras, and thus are useful for the treatment of cancer. The compounds of the present invention may have asymmetric centers and occur as racemates, racemic mixtures and as individual diastereomers, with all possible isomers, including optical isomers, being included in the present invention. When any variable (e.g. aryl, heterocycle, Rl , R^ etc.) occurs more than one time in any constituent, each definition is independent.
The term "alkyl" and the alkyl portion of alkoxy. aralkyl and similar terms, is intended to include branched and straight-chain saturated aliphatic hydrocarbon groups having the specified number of carbon atoms, or 1 -6 carbon atoms if unspecified. Cycloalkyl means 1 -2 cabocyclic rings which are saturated and contain from 3- 10 atoms. "Halogen" or "halo" as used herein means fluoro, chloro, bromo and iodo. As used herein, "aryl" and the aryl portion of aralkyl, are intended to mean any stable monocyclic or bicyclic carbon ring of up to 7 members in each ring, wherein at least one ring is aromatic. Examples of such aryl elements include phenyl, naphthyl. tetrahydronaphthyl, indanyl, biphenyl, phenanthryl, anthryl or acenaphthyl. A preferred aralkyl group is benzyl.
The terms heterocyclyl, heterocycle and heterocyclic, as used herein, mean a 5- to 7-membered monocyclic or 8- to 1 1 - membered bicyclic heterocyclic rings, either saturated or unsaturated, aromatic, partially aromatic or non-aromatic, and which consist of carbon atoms and from one to four heteroatoms selected from the group consisting of N, O, and S. Thus, it includes any bicyclic group in which any of the above-defined heterocyclic rings is fused to a benzene ring. The ring or ring system may be attached at any heteroatom or carbon atom which results in a stable structure, and may contain 1 -3 carbonyl groups. Examples of such heterocycles include, but are not limited to, azepinyl, benzimidazolyl, benzisoxazolyl, benzofurazanyl, benzopyranyl, benzothiopyranyl, benzofuryl, benzothiazolyl, benzothienyl. benzoxazolyl, chromanyl, cinnolinyl, dihydrobenzofuryl. dihydrobenzothienyl, dihydrobenzothiopyranyl, dihydrobenzothiopyranyl sulfone, furyl, imidazolidinyl, imidazolinyl, imidazolyl, indolinyl, indolyl, isochromanyl, isoindohnyl, isoquinolinyl, isothiazolidinyl, isothiazolyl, isothiazolidinyl, mo holinyl, naphthyridinyl, oxadiazolyl, 2-oxoazepinyl, oxazolyl, 2-oxopiperazinyl, 2-oxopiperdinyl, 2-oxopyrroIidinyl, piperidyl, piperazinyl, pyridyl, pyrazinyl, pyrazolidinyl, pyrazolyl, pyridazinyl, pyrimidinyl, pyrrolidinyl, pyrrolyl, quinazolinyl, quinolinyl, quinoxalinyl, tetrahydro furyl, tetrahydroisoquinolinyl, tetrahydroquinolinyl, thiamoφholinyl, thiamoφholinyl sulfoxide, thiazolyl, thiazolinyl, thienofuryl, thienothienyl, and thienyl.
"Heteroaryl" is a subset of heterocyclic, and means a monocyclic or bicyclic ring system, with up to 7 members in each ring, wherein at least one ring is aromatic and wherein from one to four carbon atoms are replaced by heteroatoms selected from the group consisting of N, O, and S. Examples include benzimidazolyl, benzisoxazolyl, benzofurazanyl, benzopyranyl, benzothiopyranyl, benzofuryl, benzothiazolyl, benzothienyl, benzoxazolyl, chromanyl, cinnolinyl, dihydrobenzofuryl, dihydrobenzothienyl, dihydrobenzothiopyranyl, dihydrobenzothiopyranyl sulfone, furyl, imidazolyl, indolinyl, indolyl, isochromanyl, isoindohnyl, isoquinolinyl, isothiazolyl, naphthyridinyl, oxadiazolyl, pyridyl, pyrazinyl, pyrazolyl, pyridazinyl, pyrimidinyl, pyrrolyl, quinazolinyl, quinolinyl, quinoxalinyl, tetrahydroisoquinolinyl, tetrahydroquinolinyl, thiazolyl, thienofuryl, thienothienyl and thienyl. Lines drawn into ring systems from substituents indicate that the bond may be attached to any of the substitutable ring atoms.
The term "substituted" as used with respect to, e.g., substituted alkyl, substituted aryl, substituted heterocyclyl and substituted cycloalkyl mean alkyl, aryl, heterocyclyl and cycloalkyl groups, respectively, having from 1 -3 substituents which are selected from: halo, aryl, heterocyclyl, C3- 10 cycloalkyl, Ci -6 alkyl, C2-6 alkenyl, C2-6 alkynyl, R*0-, R9S(0)m-, R*C(0)NR*-, CN, (R*)2NC(NR*K R«C(0)-, R«OC(0)-, N3. -N(R«)2 and R^OC(0)NR«-. Preferably 1 -2 groups are present on substituted alkyl, substituted aryl, substituted heterocyclyl and substituted cycloalkyl, which are selected from: halo, aryl, R*0-, CN, R*C(0)- and -N(R*)2.
Preferably, R la, R ^ and R2 are independently selected from: hydrogen, -N(R8)2, R8C(0)NR8- or unsubstituted or substituted Cl -C6 alkyl wherein the substituent on the substituted Cl -C6 alkyl is selected from unsubstituted or substituted aryl, -N(R )2, R 0- and R8C(0)NR8- Preferably, R3 and R4 are selected from: hydrogen and Cl -C6 alkyl. Preferably, A3 represents NR5S(0) , wherein m represents
2 and R^ represents hydrogen.
Preferably, R° represents hydrogen, unsubstituted or substituted Cl -C6 alkyl.
Preferably R7 represents H or unsubstituted Ci - alkyl. Preferably, Rx represents H or Ci -6 alkyl, and R9 is Ci - alkyl.
Preferably, A^ and A 2 are independently selected from: a bond, -C(0)NR8-, -NR8C(0)-, -0-, -N(R8)-, -S(0)2N(R8)- and-
N(R8)S(0)2-. Preferably X represents aryl and most preferably phenyl.
Preferably, V is selected from hydrogen, heterocyclyl and aryl. More preferably V is phenyl.
Preferably, W is heterocyclyl selected from imidazolinyl, imidazolyl, oxazolyl, pyrazolyl, pyyrolidinyl, thiazolyl and pyridyl. More preferably, W is selected from imidazolyl and pyridyl. Preferably, m is 2.
Preferably n and p are independently 0, 1 , 2 or 3. Preferably t is 1.
A subset of compounds of the invention is represented by formula la:
Figure imgf000011_0001
wherein:
R3, R4, A3, RK, Ry, m, n, p and r are as originally defined;
each Rl a and R is independently selected from hydrogen and Cl -C6 alkyl;
each Rib i independently selected from: hydrogen, aryl, heterocyclyl, C3-10 cycloalkyl, C2-6 alkenyl, R&0-, -N(R8)2 and Cl -C6 alkyl unsubstituted or substituted by aryl, heterocyclyl, cycloalkyl, alkenyl, R 0- and -N(R )2;
R5 is selected from the group consisting of: hydrogen and C1 -C6 alkyl, unsubstituted or substituted with 1 -3 members selected from the group consisting of: unsubstituted or substituted aryl, unsubstituted or substituted heterocyclyl, unsubstituted or substituted C3-C10 cycloalkyl, -N(R8)2, -CF3, -Nθ2, (R8)0-, (R9)S(0)m-, (R )C(0)NH-, H2NC(NH)-, (R )C(0)-, (R )OC(0)-, N3, CN and (R9)OC(0)NR8-;
R6 is selected from: hydrogen, C\ -C alkyl, C2-C6 alkenyl, C2-C6 alkynyl, C1 -C6 perfluoroalkyl, F, Cl, R 0-, R C(0)NR8-, CN, N02, (R8)2N-C(NR8)-, R C(0)-, R OC(0)-, -N(R )2, or R OC(0)NR8-, and Cl -Cβ alkyl substituted by Cl -C6 perfluoroalkyl, R 0-, R8C(0)NR8-, (R )2N-C(NR8)-, R C(0)-, R OC(0)-, -N(R )2 and R9OC(0)NR8-; R7 is hydrogen or unsubstituted Cι_6 alkyl;
A l and A are independently selected from: a bond, -CH=CH-, -C≡C-, -C(O)-, -C(0)NR8-, O, -N(R8)- and S(0)m;
and V is selected from: hydrogen; aryl; heterocyclyl selected from pyrrolidinyl, imidazolyl, pyridinyl, thiazolyl, pyridonyl, 2-oxopiperidinyl, indolyl, quinolinyl, isoquinolinyl and thienyl; C1 -C20 alkyl wherein from 0 to 4 carbon atoms are replaced with a a hetero- atom selected from O, S, and N, and C2-C2O alkenyl, provided that V is not hydrogen if A^ is S(0)m and V is not hydrogen if A ^ is a bond and A2 is S(0)m.
A second subset of compounds of the present invention is represented by formula lb:
Figure imgf000012_0001
wherein:
R la, Rib, R2, A ' , A2, R3, R4, R5, 6, RH, R ), m> n, p and r are as originally defined;
R7 is selected from: hydrogen and unsubstituted C1 -C6 alkyl;
V is selected from: hydrogen, heterocyclyl selected from pyrrolidinyl, imidazolyl, pyridinyl, thiazolyl, pyridonyl, 2-oxopiperidinyl, indolyl, quinolinyl, isoquinolinyl, and thienyl, aryl, C1 -C2O alkyl wherein from 0 to 4 carbon atoms are replaced with a heteroatom selected from O, S, and N, and C2-C2O alkenyl, provided that V is not hydrogen if A1 is S(0)m and V is not hydrogen if A1 is a bond, n is 0 and A2 is S(0)m; and
W represents heterocyclyl selected from pyrrolidinyl, pyridinyl, thiazolyl, pyridonyl, 2-oxopiperidinyl, indolyl, quinolinyl and isoquinolinyl.
A third embodiment of the invention is described in accordance with formula Ic:
Figure imgf000013_0001
wherein:
each R is independently selected from hydrogen and
C1 -C6 alkyl;
R3, R4? A3, Rx, Ry, m and p are as originally defined;
each R^ is selected from: hydrogen and C] -C6 alkyl unsubstituted or substituted with 1 -3 groups selected from unsubstituted or substituted aryl, unsubstituted or substituted heterocyclyl, unsubstituted or substituted C3-C10 cycloalkyl, -N(R )2, -CF3, -Nθ2, (R )0-, (R9)S(0)m-, (R8)C(0)NH-, H2NC(NH)-, (R )C(0)-, (R )OC(0)-, N3, -CN and (R9)OC(0)NR8-;
and R6 is selected from the group consisting of: hydrogen. C1 -C6 alkyl, C2-C6 alkenyl, C2-C6 alkynyl, C| -C6 perfluoroalkyl, , Cl, R80-, R C(0)NR8-, CN, Nθ2, (R8)2N-C(NR8)-, R C(0)-, R OC(0)-, -N(R )2, or R9OC(0)NR8- and Cl-C6 alkyl substituted by C1-C6 perfluoroalkyl, R80-, R8C(0)NR8-, (R )2N-C(NR8)-, R8C(0), R OC(0)-, -N(R )2 or R9OC(0)NR8-.
A fourth subset of compounds of the invention is represented by formula Id:
Figure imgf000014_0001
Id
wherein:
each R2 is independently selected from: hydrogen and Cl -C6 alkyl;
R3 and R4 are independently selected from H, F, Cl, Br, N(R )2, CF3, N02, (R8)0-, (R9)S(0)m-, (R )C(0)NH-, H2N-C(NH)-, (R )C(0)-, (R )OC(0)-, N3, CN, (R9)OC(0)NR8-, C 1 -C20 alkyl, substituted or unsubstituted aryl, and substituted or unsubstituted heterocyclyl;
A3 represents -NR5-S(0)m- or -S(0)m-NR5-
R5 is selected from: hydrogen and C 1 -C6 alkyl, unsubstituted or substituted witha group selected from unsubstituted or substituted aryl, unsubstituted or substituted heterocyclyl, unsubstituted or substituted C3-C10 cycloalkyl, N(R )2. CF3, NO2, (R8)0-, (R9)S(0)m-, (R )C(0)NH-, H2N-C(NH)-, (R )C(0)-, (R )OC(0)-, N3, CN (R9)OC(0)NR8-; and R8, R9> m and p are as originally defined.
Specific examples of compounds of the invention are:
Figure imgf000015_0001
10
Figure imgf000016_0001
Figure imgf000017_0001
and the pharmaceutically acceptable salts thereof. The pharmaceutically acceptable salts of the compounds of this invention include the conventional non-toxic salts of the compounds of this invention as formed, e.g., from non-toxic inorganic or organic acids. For example, such conventional non-toxic salts include those derived from inorganic acids such as hydrochloric, hydrobromic, sulfuric, sulfamic, phosphoric, nitric and the like: and the salts prepared from organic acids such as acetic, propionic, succinic, glycolic, stearic, lactic, malic, tartaric, citric, ascorbic, pamoic, maleic, hydroxymaleic, phenylacetic, glutamic, benzoic, salicylic, sulfanilic, 2-acetoxy-benzoic, fumaric, toluenesulfonic, methanesulfonic, ethane disulfonic, oxalic, isethionic, trifluoroacetic and the like.
The pharmaceutically acceptable salts of the compounds of this invention can be synthesized from the compounds of this invention which contain a basic moiety by conventional chemical methods. Generally, the salts are prepared either by ion exchange chromatography or by reacting the free base with stoichiometric amounts or with an excess of the desired salt-forming inorganic or organic acid in a suitable solvent or various combinations of solvents. Reactions used to generate the compounds of this invention are prepared by employing reactions as shown in Schemes 1 - 7, in addition to other standard manipulations such as ester hydrolysis, cleavage of protecting groups, etc., as may be known in the literature or exemplified in the experimental procedures. Substituents R and R CH2-, as shown in the Schemes, represent the substituents R8, R9 and others, depending on the compound of the instant invention that is being synthesized. The variable p' represents p-1.
These reactions may be employed in a linear sequence to provide the compounds of the invention or they may be used to synthesize fragments which are subsequently joined by the alkylation reactions described in the Schemes.
Synopsis of Schemes The requisite intermediates are commercially available or can be prepared according to literature procedures. The Schemes illustrate the synthesis of certain preferred embodiments of the instant invention, wherein the variable W is present as an imidazolyl moiety that is substituted. Substituted protected imidazole alkanols II can be prepared by methods, such as those described by F. Schneider, Z.
Physiol. Chem., 3:206-210 ( 1961 ) and C.P. Stewart, Biochem. Journal, 17: 130-133(1923). Benzylation and deprotection of the imidazole alkanol provides an intermediate which can be oxidized to the corresponding aldehyde. The aldehyde IV is reacted with a suitably substituted amine. The intermediate can then be reacted with a sulfinyl chloride. Syntheses of suitably substituted aldehydes are illustrated wherein the variable W is present as a pyridyl moiety. Similar synthetic strategies for preparing alkanols that incoφorate other heterocyclic moieties for variable W are also well known in the art.
The sulfinamide can be formed by converting a hydroxyl group to a sulfinyl chloride, and then reacting the sulfinyl chloride with the appropriately substituted amine. The resulting sulfinamide can thereafter be oxidized with, e.g., periodate, to produce sulfonamides in accordance with formula I. Likewise, by reacting the precursor amine with an alkylating agent, substitution on the sulfonamide nitrogen atom can be realized.
SCHEME 1
Figure imgf000019_0001
2. N-deprotect
IV V SCHEME 2
Figure imgf000020_0001
-19-
SCHEMF3
Figure imgf000021_0001
Figure imgf000022_0001
SCHEME5
Figure imgf000023_0001
NaBH4 (excess)
Figure imgf000024_0001
SCHEME 7
Figure imgf000025_0001
NaBH4 (excess)
SCHEME 8
2. (CH3)3SiCHN2
Figure imgf000026_0001
excess NaBH4
SCHEME9
BocNH- IX CH3NH2*HCI BocNH-
BocNH CHO NaBH(OAc)3 BocNH" ~CH NHCH,
Figure imgf000027_0001
SCHEME1Q
Figure imgf000028_0001
Et3N . CICH2CH2CI
SCHEME11
Figure imgf000029_0001
BocHN-
H2N" NCH3S0 NaBH(OAc)3 Et3N , CICH2CH2CI
Boc
Figure imgf000030_0001
Boc
SCHEME 13
Figure imgf000031_0001
SCHEME14
Boc
Figure imgf000032_0001
HCI, EtOAc
-31
SCHEME 15
Figure imgf000033_0001
ocNH XXVI I
XXVII
XXIX
SCHEME 16
Figure imgf000034_0001
The instant compounds are useful in the treatment of cancer. Cancers which may be treated with the compounds of this invention include, but are not limited to, colorectal carcinoma, exocrine pancreatic carcinoma, myeloid leukemias and neurological tumors. Such tumors may arise by mutations in the ras genes themselves, mutations in the proteins that can regulate Ras activity (i.e., neurofibromin (NF-1 ), neu. scr, abl , lck, fyn) or by other mechanisms. The compounds of the instant invention inhibit farnesyl- protein transferase and famesylation of the oncogene protein Ras. The instant compounds may also inhibit tumor angiogenesis, thereby affecting the growth of tumors (J. Rak et al. Cancer Research, 55:4575- 4580 (1995)). Such anti-angiogenic properties of the instant compounds may also be useful in the treatment of certain forms of blindness related to retinal vascularization.
The compounds of this invention are also useful for inhibiting other diseases where Ras proteins are aberrantly activated as a result of oncogenic mutation in other genes (i.e., the Ras gene itself is not activated by mutation to an oncogenic form) with said inhibition being accomplished by the administration of an effective amount of the compounds of the invention to a mammal in need of such treatment. For example, a component of NF-1 is a benign proliferative disorder.
The instant compounds may also be useful in the treatment of viral infections, in particular in the treatment of hepatitis delta and related viruses (J.S. Glenn et al. Science, 256: 1331 - 1 33 ( 1992).
The compounds of the instant invention are also useful in the prevention of restenosis after percutaneous transluminal coronary angioplasty by inhibiting neointimal formation (C. Indolfi et al. Nature medicine, 1 :541-545(1995). The instant compounds may also be useful in the treatment and prevention of polycystic kidney disease (D.L. Schaffner et al. American Journal of Pathology, 142: 1051 - 1060 (1993) and B. Cowley, Jr. et d ' l.FASEB Journal, 2:A3160 ( 1988)). The instant compounds may also be useful for the treatment of fungal infections.
The compounds of this invention may be administered to mammals, preferably humans, either alone or, preferably, in combina- tion with pharmaceutically acceptable carriers or diluents, in the form of a pharmaceutical composition, which is comprised of a compound of formula I in combination with a pharmaceutically acceptable carrier. The compounds can be administered orally, topically, rectally, vaginally transdermally or parenterally, including the intravenous, intramuscular, intraperitoneal and subcutaneous routes of administration.
For oral use, the compound is administered, for example, in the form of tablets or capsules, or as a solution or suspension. In the case of tablets for oral use, carriers which are commonly used include lactose and corn starch; lubricating agents, such as magnesium stearate, are commonly added. For oral administration in capsule form, diluents also include lactose and dried corn starch. When aqueous suspensions are required for oral use, the active ingredient is combined with emulsifying and suspending agents. If desired, certain sweetening and/or flavoring agents may be added. For intramuscular, intra- peritoneal, subcutaneous and intravenous use, sterile solutions of the active ingredient are usually prepared, the pH of the solution is suitably adjusted and the product is buffered. For intravenous use, the total concentration is controlled to render the preparation substantially isotonic. The compounds of the instant invention may also be co-administered with other well known therapeutic agents that are selected for their particular usefulness against the condition that is being treated. For example, the instant compounds may be useful in combination with known anti-cancer and cytotoxic agents. Similarly, the instant compounds may be useful in combination with agents that are effective in the treatment and prevention of NF- 1 , restinosis, polycystic kidney disease, infections of hepatitis delta and related viruses and fungal infections. If formulated as a fixed dose, such combination products employ a compound of this invention substantially within the dosage range described below and other pharmaceutically active agent(s) typically within the acceptable dosage range. Compounds of the instant invention may alternatively be used sequentially with known pharma¬ ceutically acceptable agent(s) when a combination formulation is inappropriate.
The daily dosage will normally be determined by the prescribing physician, who may vary the dosage according to the age, weight, and response of the individual patient, as well as the severity of the patient's condition.
In one exemplary application, a suitable amount of compound is administered to a mammal undergoing treatment for cancer. Administration occurs in an amount between about 0.1 mg/kg of body weight to about 60 mg/kg of body weight per day, preferably of between 0.5 mg/kg of body weight to about 40 mg/kg of body weight per day.
The compounds of the instant invention are also useful as a component in an assay to rapidly determine the presence and quantity of famesyl-protein transferase (FPTase) in a composition. Thus the composition to be tested may be divided and the two portions contacted with mixtures which comprise a known substrate of FPTase (for example a tetrapeptide having a cysteine at the amine terminus) and famesyl pyrophosphate and, in one of the mixtures, a compound of the instant invention. After the assay mixtures are incubated for an sufficient period of time, well known in the art, to allow the FPTase to famesylate the substrate, the chemical content of the assay mixtures may be determined by well known immuno- logical, radiochemical or chromatographic techniques. Because the compounds of the instant invention are selective inhibitors of FPTase, absence or quantitative reduction of the amount of substrate in the assay mixture without the compound of the instant invention relative to the presence of the unchanged substrate in the assay containing the instant compound is indicative of the presence of FPTase in the composition to be tested.
It would be readily apparent to one of ordinary skill in the art that such an assay as described above would be useful in identifying tissue samples which contain famesyl-protein transferase and quanti- tating the enzyme. Thus, potent inhibitor compounds of the instant invention may be used in an active site titration assay to determine the quantity of enzyme in the sample. A series of samples composed of aliquots of a tissue extract containing an unknown amount of farnesyl- protein transferase, an excess amount of a known substrate of FPTase (for example a tetrapeptide having a cysteine at the amine terminus) and famesyl pyrophosphate are incubated for an appropriate period of time in the presence of varying concentrations of a compound of the instant invention. The concentration of a sufficiently potent inhibitor (i.e., one that has a Ki substantially smaller than the concentration of enzyme in the assay vessel) required to inhibit the enzymatic activity of the sample by 50% is approximately equal to half of the concentration of the enzyme in that particular sample.
EXAMPLE 1
N-f 1 -(4-CY ANOBENZY IMIDAZOLYL-5-METHYLI-N- (METHYL)-3-CHLOROBENZYLSULFONAMIDE
HYDROCHLORIDE
Step A: Preparation of l -triphenylmethyl-4-(hydroxymethyl)imidazole
To a solution of 4-(hydroxymethyl)imidazole hydrochloride (35.0 g, 260 mmol) in 250 mL of dry DMF at room temperature was added triethylamine (90.6 mL, 650 mmol). A white solid precipitated from the solution. Chlorotriphenylmethane (76.1 g, 273 mmol) in 500 mL of DMF was added dropwise. The reaction mixture was stirred for 20 hours, poured over ice, filtered, and washed with ice water. The resulting product was slurried with cold dioxane, filtered, and dried in vacuo to provide the titled product as a white solid which was sufficiently pure for use in the next step. Step B: Preparation of l -triphenylmethyl-4-(acetoxymethyl)imidazole
Alcohol from Step A (260 mmol, prepared above) was suspended in 500 mL of pyridine. Acetic anhydride (74 mL, 780 mmol) was added drop wise, and the reaction was stirred for 48 hours during which it became homogeneous. The solution was poured into 2 L of EtOAc, washed with water (3 x 1 L), 5% aq. HCI soln. (2 x 1 L), sat. aq. NaHCθ3, and brine, then dried (Na2Sθ4), filtered, and concentrated in vacuo to provide the crude product. The acetate was isolated as a white powder (85.8 g, 86% yield for two steps) which was sufficiently pure for use in the next reaction.
Step C: Preparation of l -(4-cyanobenzyl)-5-(acetoxymethyl)imidazole hydrobromide A solution of -the product from Step B (85.8 g, 225 mmol) and α-bromo-/?-tolunitrile (50.1 g, 232 mmol) in 500 mL of EtOAc was stirred at 60°C for 20 hours, during which a pale yellow precipitate formed. The reaction was cooled to room temperature and filtered to provide the solid imidazolium bromide salt. The filtrate was concentrated in vacuo to a volume 200 mL, reheated at 60°C for two hours, cooled to room temperature, and filtered again. The filtrate was concentrated in vacuo to a volume 100 mL, reheated at 60°C for another two hours, cooled to room temperature, and concentrated in vacuo to provide a pale yellow solid. All of the solid material was combined, dissolved in 500 mL of methanol, and warmed to 60 °C. After two hours, the solution was reconcentrated in vacuo to provide a white solid which was triturated with hexane to remove soluble materials. Removal of residual solvents in vacuo provided the titled product hydrobromide as a white solid (50.4 g, 67% yield, 89% purity by HPLC) which was used in the next step without further purification.
Step D: Preparation of l -(4-cyanobenzyl)-5-(hydroxymethyl)imidazolc
To a solution of the acetate from Step C (50.4 g, 150 mmol) in 1.5 L of 3: 1 THF/water at 0 °C was added lithium hydroxide monohydrate ( 18.9 g, 450 mmol). After one hour, the reaction was concentrated in vacuo, diluted with EtOAc (3 L), and washed with water, sat. aq. NaHCθ and brine. The solution was then dried (Na24), filtered, and concentrated in vacuo to provide the crude product (26.2 g, 82% yield) as a pale yellow fluffy solid which was sufficiently pure for use in the next step without further purification.
Step E: Preparation of l -(4-cyanobenzyl)-5-imidazolecarboxaldehyde To a solution of the alcohol from Step D (21.5 g, 101 mmol) in 500 mL of DMSO at room temperature was added triethyl¬ amine (56 mL, 402 mmol), then Sθ3-pyridine complex (40.5 g. 254 mmol). After 45 minutes, the reaction was poured into 2.5 L of EtOAc, washed with water (4 x 1 L) and brine, dried (Na2S04), filtered, and concentrated in vacuo to provide the aldehyde ( 18.7 g, 88% yield) as a white powder which was sufficiently pure for use in the next step without further purification.
Step F: Preparation of l -(4-cyanobenzyl)-5-
I (methylamino)methyllimidazole To a suspension of methylamine hydrochloride in 5 mL dichloroethane at 0°C are added 4 A sieves (0.5g), followed by 1 mmol of the aldehyde from Step E and 1.5 mmol Na(OAc)3BH. The reaction is stirred for 10 minutes at 0°C, warmed to room temperature and stirred for 2 hours. The reaction is poured into EtOAc/ sat. NaHC03 solution. The organic layer is washed with brine, dried (Na2S04 ), filtered, and concentrated in vacuo. The crude product is taken up in 10 mL dichloromethane and 2 mL /2-propyl mine, stirred at room temperature for 1 hour, concentrated in vacuo , and purified by flash chromatography.
Step G: Preparation of 3-chlorobenzyl thioacetate
To a solution of 1 mmol 3-chlorobenzyl alcohol and 1 mmol triphenylphosphine in 5 mL THF at 0° C. 1 mmol diethyl- azodicarboxylate is added. After stirring for 10 minutes, 1 mmol thioacetic acid is added. The reaction is stirred for 3 hours, concentrated and purified by flash chromatography.
Step H: Preparation of 3-chlorobenzylsulfinyl chloride
To a -20° C solution of the thioester from Step G (1 mmol) in 3 mL of dichloromethane under argon are added 1 mmol acetic anhydride and 2 mmol sulfuryl chloride. The reaction is stirred for 1 hr during which time the temperature is allowed to rise to -5° C. The mixture is concentrated in vacuo and the crude product used for coupling in the next step.
Step I: Preparation of N-[l -(4-cyanobenzyl)imidazolyl-5-methyl]- N-(methyl)-3-chlorobenzylsulfinamide To a 0° C solution of the sulfinyl chloride from Step H
(1 mmol) in 4 mL dichloromethane is added a solution of 1 mmol triethylamine and 1 mmol of the amine from Step F in 2 mL dichloro¬ methane. The reaction is stirred overnight and the temperature is allowed to rise to room temperature. This mixture is poured into ethyl acetate, washed with sat. NaHCθ3 solution and brine, dried with a2S04, concentrated and purified by flash chromatography.
Step J: Preparation of N-[l -(4-cyanobenzyl)imidazolyl-5-methyJJ-
N-(methyl)-3-chlorobenzylsulfonamide hydrochloride A solution of the sulfinamide from Step I (1 mmol) in
2 mL acetonitrile is cooled to 0°C. NaI04 is added (1.5 mmol) followed by a catalytic amount of RuCl3«3H2θ and 2 mL H2θ. The reaction is stirred at room temperature for 1 hour, diluted with EtOAc, and washed with sat. NaHC03 solution and brine, dried (Na2Sθ4), filtered and concentrated. The resulting product is purified by flash chromatography. then taken up in dichloromethane, and treated with with excess ethereal HCI. Concentration in vacuo provides the titled product. EXAMPLE 2
N-(3-CHLOROBENZYL)-l -l (4-CYANOBENZYL)-5- IMIDAZOLYL1METHYLSULFONAMIDE HYDROCHLORIDE
Step A: Preparation of l -(4-chlorobenzyl)-5-imidazolylmethyl sulfinyl chloride
The titled compound is prepared from the alcohol from Step D of Example 1 by the methods described in Steps G and H of Example 1.
Step B: Preparation of N-(3-chlorobenzyl)- l -[ (4-cyanobenzy!)-5- imidazoly 1 lmethylsulfinamide
The sulinyl chloride from Step A is coupled with 3- chlorobenzylamine using the method described in Step I of Example 1.
Step C: Preparation of N-(3-chlorobenzyl)-l-[(4-cyanobenzyl)-5- imidazolyllmethylsulfonamide hydrochloride
The sulfinamide from Step B is oxidized to the sulfonamide and converted to the HCI salt using the method described in Step J of Example 1.
EXAMPLE 3
N-[3-(4-CYANOBENZYL)PYRIDYL-4-METHYLl-N-(METHYL)-3- CHLOROBENZYLSULFONAMIDEHYDROCHLORIDE
Step A: Preparation of 3-(4-cyanobenzyl)pyridin-4-carboxylic acid methyl ester A solution of 4-cyanobenzyl bromide (625 mg, 3.27 mmol) in dry THF (4mL) was added slowly over ~3 min. to a suspension of activated Zn (dust; 250 mg) in dry THF (2 mL) at O0 under an argon atmosphere. The ice-bath was removed and the slurry was stirred at room temperature for a further 30 min. Then 3-bromopyridin-4- carboxylic acid methyl ester (540 mg. 2.5 mmol) followed by dichlorobis(triphenylphosρhine)nickel (II) (50 mg). The resultant reddish-brown mixture was stirred for 3h at ~40-45°C. The mixture was cooled and distributed between EtOAc (100 ml) and 5% aqueous citric acid (50 mL). The organic layer was washed with H2θ (2X50 mL), dried with Na2Sθ4. After evaporation of the solvent the residue was purified on silica gel, eluting with 35% EtOAc in hexane to give 420 mg as a clear gum. FAB ms (M+l) 253.
Step B: Preparation of 3-(4-cyanobenzy0-4-(hydroxymethy0pyridine The title compound was obtained by sodium borohydride
(300 mg) reduction of the ester from Step A (415 mg) in methanol (5 L) at room temperature. After stirring for 4 h the solution was evaporated and the product was purified on silica gel, eluting with 2% methanol in chloroform to give the title compound. FAB ms (M+l ) 225.
Step C: Preparation of 3-(4-cyanobenzyl)-4-pyridinal
The title compound was obtained by activated manganese dioxide (l .Og) oxidation of the alcohol from Step B (240 mg, 1.07 mmol) in dioxane (10 mL) at reflux for 30 min. Filtration and evaporation of the solvent provided title compound, mp 80-83°C.
Step D: Preparation of 3-(4-cyanobenzyl)-4- r(methyIamino)methyllpyridine The titled compound is prepared from the pyridinal from
Step C and methylamine hydrochloride using the procedure in Step F of Example 1.
Step E: Preparation of N-[3-(4-cyanobenzyl)pyridyl-4-methyl]-N- (methyl)-3-chlorobenzylsuIfonamide hydrochloride
The titled compound is prepared from the amine from Step D and the sulfinyl chloride from Step H of Example 1 using the procedures described in Steps I and J of Example 1. In vitro inhibition of ras famesyl transferase
Assays of famesyl-protein transferase. Partially purified bovine FPTase and Ras peptides (Ras-CVLS, Ras-CVIM and Ras-CAIL) were prepared as described by Schaber et al.. J. Biol. Chem. 265: 14701 - 14704 (1990), Pompliano, et a Biochemistry 31 :3800 (1992) and Gibbs et aL, PNAS U.S.A. 86:6630-6634 (1989), respectively. Bovine FPTase was assayed in a volume of 100 μl containing 100 mM N-(2- hydroxy ethyl) piperazine-/V'-(2-ethane sulfonic acid) (HEPES), pH 7.4, 5 mM MgCl2, 5 mM dithiothreitol (DTT), 100 mM Hl-farnesyl diphosphate ( Hj-FPP; 740 CBq/mmol, New England Nuclear), 650 nM Ras-CVLS and 10 μg/ml FPTase at 31 °C for 60 min. Reactions were initiated with FPTase and stopped with 1 ml of 1.0 M HCL in ethanol. Precipitates were collected onto filter-mats using a TomTec Mach II cell harvestor, washed with 100% ethanol, dried and counted in an LKB β-plate counter. The assay was linear with respect to both substrates, FPTase levels and time; less than 10% of the H j-FPP was utilized during the reaction period. Purified compounds were dissolved in 100% dimethyl sulfoxide (DMSO) and were diluted 20-fold into the assay. Percentage inhibition is measured by the amount of incorporation of radioactivity in the presence of the test compound when compared to the amount of incorporation in the absence of the test compound.
Human FPTase was prepared as described by Omer et al.. Biochemistry 32:5167-5176 ( 1993). Human FPTase activity was assayed as described above with the exception that 0.1 % (w/v) polyethylene glycol 20,000, 10 μM ZnCI2 and 100 nM Ras-CVIM were added to the reaction mixture. Reactions were performed for 30 min., stopped with 100 μl of 30% (v/v) trichloroacetic acid (TCA) in ethanol and processed as described above for the bovine enzyme.
In vivo ras famesylation assay
The cell line used in this assay is a v-ras line derived from either Rat l or NIH3T3 cells, which expressed viral Ha-ras p21. The assay is performed essentially as described in DeClue, J.E. et ai., Cancer Research 51 :712-717, (1991). Cells in 10 cm dishes at 50-75% confluency are treated with the test compound (final concentration of solvent, methanol or dimethyl sulfoxide, is 0.1 %). After 4 hours at 37°C, the cells are labelled in 3 ml methionine-free DMEM supple- meted with 10% regular DMEM, 2% fetal bovine serum and 400 mCi[35S]methionine (1000 Ci/mmol). After an additional 20 hours, the cells are lysed in 1 ml lysis buffer (1 % NP40/20 mM HEPES, pH 7.5/5 mM MgCl2/lmM DTT/10 mg/ml aprotinen/2 mg/ml leupeptin/2 mg/ml antipain/0.5 mM PMSF) and the lysates cleared by centrifugation at 100,000 x g for 45 min. Aliquots of lysates containing equal numbers of acid-precipitable counts are bought to 1 ml with IP buffer (lysis buffer lacking DTT) and immunoprecipitated with the ras-specific monoclonal antibody Y13-259 (Furth, M.E. et a]., J. Virol. 43:294-304, (1982)). Following a 2 hour antibody incubation at 4°C, 200 ml of a 25% suspension of protein A-Sepharose coated with rabbit anti rat IgG is added for 45 min. The immunoprecipitates are washed four times with IP buffer (20 nM HEPES, pH 7.5/1 mM EDTA/1 % Triton X- 100.0.5% deoxycholate/0.1 %/SDS/0.1 M NaCI) boiled in SDS-PAGE sample buffer and loaded on 13% acrylamide gels. When the dye front reached the bottom, the gel is fixed, soaked in Enlightening, dried and autoradiographed. The intensities of the bands corresponding to famesylated and nonfarnesylated ras proteins are compared to determine the percent inhibition of famesyl transfer to protein.
In vivo growth inhibition assay
To determine the biological consequences of FPTase inhibition, the effect of the compounds of the instant invention on the anchorage-independent growth of Ratl cells transformed with either a v-ras, v-raf, or v-mos oncogene is tested. Cells transformed by v-Raf and v-Mos maybe included in the analysis to evaluate the specificity of instant compounds for Ras-induced cell transformation.
Rat 1 cells transformed with either v-ras, v-raf, or v-mos are seeded at a density of 1 x 104 cells per plate (35 mm in diameter) in a 0.3% top agarose layer in medium A (Dulbecco's modified Eagle's medium supplemented with 10% fetal bovine serum) over a bottom agarose layer (0.6%). Both layers contain 0.1 % methanol or an appropriate concentration of the instant compound (dissolved in methanol at 1000 times the final concentration used in the assay). The cells are fed twice weekly with 0.5 ml of medium A containing 0.1 % methanol or the concentration of the instant compound. Photomicro¬ graphs are taken 16 days after the cultures are seeded and comparisons are made.

Claims

WHAT IS CLAIMED IS:
1. A compound represented by formula I:
Figure imgf000047_0001
or a pharmaceutically acceptable salt thereof, wherein:
R 1 a, R1 b and R2 are independently selected from the group consisting of: hydrogen, aryl, heterocyclyl, C3-C10 cycloalkyl, C2-C6 alkenyl, C2-C6 alkynyl, R8O-, R9S(O)m-, (R8)2NC(O)-, R8C(O)NR8-, CN, NO2, (R8)2NC(NR8)-, R8C(O)-, R8OC(O)-, N3, -N(R8)2,
R9OC(O)NR8- and C1 -C6 alkyl, unsubstituted or substituted by 1 -3 groups selected from the group consisting of: halo, aryl, heterocyclyl, C3-C10 cycloalkyl, C2-C6 alkenyl, C2-C6 alkynyl, R8O-, R9S(O)m-, R8C(O)NR8-, CN, (R8)2NC(NR8)- , R8C( O)-, R8OC(O)-, N3, -N(R8)2 and R9OC(O)NR8-;
R3 and R4 are independently selected from the group consisting of: H, F, Cl, Br, -NR8 2, CF3, NO2, R8O-, R9S(O)m-,
(R8)2NC(O)-, R8C(O)NH-, H2NC(NH)-, R8C(O)-, R8OC(O)-, N3, CN, R90C(O)NRS-, C1 -C20 alkyl, substituted or unsubstituted aryl and substituted or unsubstituted heterocyclyl; A3 is selected from: -NR5S(O)m- or -S(O)mNR5-, with m equal to 0, 1 or 2, and R5 selected from the group consisting of:
hydrogen, unsubstituted or substituted aryl, unsubstituted or substituted heterocyclyl, unsubstituted or substituted C3-C10 cycloalkyl, and C1 -C6 alkyl. unsubstituted or substituted with 1 -3 members selected from the group consisting of: unsubstituted or substituted aryl, unsubstituted or substituted heterocyclyl, unsubstituted or substituted C3-C10 cycloalkyl, -N(R8)2, -CF3, -NO2, (R8)O-, (R9)S(O)m-, (R8)C(O)NH-, H2NC(NH)- , (R8)C(O)-, (R8)OC(O)-, N3, CN and (R9)OC(O)NR8-; R6 and R7 are independently selected from the group consisting of: hydrogen, aryl, heterocyclyl, C3-C10 cycloalkyl,
C2-C6 alkenyl, C2-C6 alkynyl, C1 -6 perfluoroalkyl, F, Cl, Br, R8O-, R9S(O)m-, R8C(O)NR8-, CN, NO2, (R8)2NC(NR8)-, R8C(O)-,
R8OC(O)-, N3, -N(R8)2, R9OC(O)NR8- and C1 -C6 alkyl unsubstituted or substituted by 1 -3 groups selected from: aryl, heterocyclyl, C3-C10 cycloalkyl, C2-C6 alkenyl, C2-C6 alkynyl, perfluoroalkyl, F, Cl, Br, R8O-, R9S(O)m-, R8C(O)NR8-, CN, (R8)2NC(NR8)-, R8C(O)-,
R8OC(O)-, N3, -N(R8)2 and R9OC(O)NR8-; each R8 is independently selected from hydrogen, C1 -C6 alkyl, aryl and aralkyl; each R9 is independently selected from C1 -C6 alkyl and aryl;
A 1 and A2 are independently selected from the group consisting of: a bond, -CH=CH-, -C≡C-, -C(O)-, -C(O)NR8-,
-NR8C(O)-, -O-, -N(R8)-, -S(O)2N(R8)-, -N(R8)S(O)2-, and S(O)m; X represents aryl or heteroaryl;
V is selected from the group consisting of: hydrogen, heterocyclyl, aryl, C 1 -C20 alkyl wherein from 0 to 4 carbon atoms are replaced with a heteroatom selected from O, S, and N, and C2-C20 alkenyl,
provided that V is not hydrogen if A 1 is S(O)m and V is not hydrogen if A 1 is a bond, n is 0 and A2 is S(O)m;
W represents heterocyclyl; each n and p independently represents 0, 1 , 2, 3 or 4;
r is 0 to 5, provided that r is 0 when V is hydrogen, and t is 0 or 1.
2. A compound in accordance with claim 1 wherein
R1 a, R1 b and R2 are independently selected from the group consisting of: hydrogen, -N(R8)2, R8C(O)NR8- and C1 -6 alkyl, unsubstituted or substituted with 1 -2 groups selected from unsubstituted or substituted aryl, -N(R8)2, R8O- and R8C(O)NR8- .
3. A compound in accordance with claim 1 wherein R3 and R4 are selected from: hydrogen and C1 -C6 alkyl.
4. A compound in accordance with claim 1 wherein A3 represents NR5S(O)m, in which m represents 2 and R5 represents hydrogen.
5. A compound in accordance with claim 1 wherein R6 represents hydrogen, unsubstituted or substituted C1 -C6 alkyl.
6. A compound in accordance with claim 1 wherein R7 represents H or unsubstituted C1 -6 alkyl.
7. A compound in accordance with claim 1 wherein R8 represents H or C1 -6 alkyl, and R9 is C1 -6 alkyl.
8. A compound in accordance with claim 1 wherein A 1 and A2 are independently selected from: a bond, -C(O)NR8-,
-NR8C(O)-, -O-, -N(R8)-, -S(O)2N(R8)- and-N(R8)S(O)2-.
9. A compound in accordance with claim 1 wherein V is selected from hydrogen, heterocyclyl and aryl.
10. A compound in accordance with claim 1 wherein V represents phenyl.
1 1. A compound in accordance with claim 1 wherein X represents aryl.
12. A compound in accordance with claim 1 1 wherein X represents phenyl.
13. A compound in accordance with claim 1 wherein W is heterocyclyl selected from the group consisting of: imidazolinyl, imidazolyl, oxazolyl, pyrazolyl, pyyrohdinyl, thiazolyl and pyridyl.
14. A compound in accordance with claim 10 wherein W is selected from imidazolyl and pyridyl.
15. A compound in accordance with claim 1 wherein m is 0 or 2.
16. A compound in accordance with claim 1 wherein n and p are 0, 1 , 2 or 3.
17. A compound in accordance with claim 1 wherein t is 1 .
18. A compound in accordance with claim 1 represented by formula la:
Figure imgf000050_0001
wherein: R3, R4, A3, R8, R9, m, n, p and r are as originally defined; each R 1 a and R2 is independently selected from hydrogen and C1 -C6 alkyl;
each R 1 b is independently selected from: hydrogen, aryl, heterocyclyl, C3- 10 cycloalkyl, C2-6 alkenyl, R8O-, -N(R8)2 and C1 -C6 alkyl unsubstituted or substituted by aryl, heterocyclyl, cycloalkyl.
alkenyl, R8O- and -N(R8)2;
R5 is selected from the group consisting of: hydrogen and C1 -C6 alkyl, unsubstituted or substituted with 1 -3 members selected from the group consisting of: unsubstituted or substituted aryl, unsubstituted or substituted heterocyclyl, unsubstituted or substituted C3-C10 cycloalkyl, -N(R8)2, -CF3, -NO2, (R8)O-, (R9)S(O)m-, (R8)C(O)NH-, H2NC(NH)-, (R8)C(O)-, (R8)OC(O)-, N3, CN and (R9)OC(O)NR8-;
R6 is independently selected from: hydrogen, C1 -C6 alkyl, C2-C6 alkenyl, C2-C6 alkynyl, C1 -C6 perfluoroalkyl, F. Cl, R8O-, R8C(O)NR8-, CN, NO2, (R8)2N-C(NR8)-, R8C(O)-, R8OC(O)-, -N(R8)2, or R9θC(O)NR8-, and C1 -C6 alkyl substituted by C1 -C6 perfluoroalkyl, R8O-, R8C(O)NR8-, (R8)2N-C(NR8)-, R8C(O)-, R8OC(O)-, -N(R8)2 and R9OC(O)NR8-;
R7 is H or unsubstituted C1 -6 alkyl;
A 1 and A2 are independently selected from: a bond, -CH=CH-, -C≡C-, -C(O)-, -C(O)NR8-, O. -N(R8)- and S(O)m; and V is selected from: hydrogen; aryl; heterocyclyl selected from pyrrolidinyl, imidazolyl, pyridinyl, thiazolyl, pyridonyl, 2-oxopiperidinyl, indolyl, quinolinyl, isoquinolinyl and thienyl; C1 -C20 alkyl wherein from 0 to 4 carbon atoms are replaced with a a hetero- atom selected from O, S, and N, and C2-C20 alkenyl, provided that V is not hydrogen if A1 is S(O)m and V is not hydrogen if A1 is a bond and A2 is S(O)m.
19. A compound in accordance with claim 1 represented by formula lb:
Figure imgf000052_0001
wherein:
R 1 a, R1 b, R2, A 1, A2, R3, R4, R5, R6, R8, R9, m, n, p and r are as originally defined;
R7 is selected from: hydrogen and unsubstituted C1 -C6 alkyl;
V is selected from: hydrogen, heterocyclyl selected from pyrrolidinyl, imidazolyl, pyridinyl, thiazolyl, pyridonyl, 2- oxopiperidinyl, indolyl, quinolinyl, isoquinolinyl, and thienyl, aryl, C1 -C20 alkyl wherein from 0 to 4 carbon atoms are replaced with a heteroatom selected from O, S, and N, and C2-C20 alkenyl, provided that V is not hydrogen if A 1 is S(O)m and V is not hydrogen if A 1 is a bond, n is 0 and A2 is S(O)m; and
W represents heterocyclyl selected from pyrrolidinyl, pyridinyl, thiazolyl, pyridonyl, 2-oxopiperidinyl, indolyl, quinolinyl and isoquinolinyl.
20. A compound in accordance with claim 1 represented by formula Ic:
Figure imgf000053_0001
wherein: each R2 is independently selected from hydrogen and C1 -C6 alkyl;
R3, R4, A3, R8, R9, m and p are as originally defined; each R5 is selected from: hydrogen and C1 -C6 alkyl unsubstituted or substituted with 1 -3 groups selected from unsubstituted or substituted aryl, unsubstituted or substituted heterocyclyl,
unsubstituted or substituted C3-C1 0 cycloalkyl, -N(R8)2, -CF3, -NO2, (R8)O-, (R9)S(O)m-, (R8)C(O)NH-, H2NC(NH)-, (R8)C(O)-,
(R8)OC(O)-, N3, -CN and (R9)OC(O)NR8-; and R6 is selected from the group consisting of: hydrogen, C1-C6 alkyl, C2-C6 alkenyl, C2-C6 alkynyl, C1 -C6 perfluoroalkyl, F, Cl, R8O-, R8C(O)NR8-, CN, NO2, (R8)2N-C(NR8)-, R8C(O)-,
R8OC(O)-, -N(R8)2, or R9OC(O)NR8- and C1 -C6 alkyl substituted by C1 -C6 perfluoroalkyl, R8O-, R8C(O)NR8-, (R8)2N-C(NR8)-, R8C(O), R8OC(O)-, -N(R8)2 or R9OC(O)NR8-.
21. A compound in accordance with claim 1 represented by formula Id:
Figure imgf000054_0001
wherein: each R2 is independently selected from: hydrogen and C1 -C6 alkyl;
R3 and R4 are independently selected from H, F, Cl, Br, N(R8)2, CF3, NO2, (R8)O-, (R9)S(O)m-, (R8)C(O)NH-, H2N-C(NH)-, (R8)C(O)-, (R8)OC(O)-, N3, CN, (R9)OC(O)NR8-, C1 -C20 alkyl, substituted or unsubstituted aryl, and substituted or unsubstituted heterocyclyl;
A3 represents -NR5-S(O)m- or -S(O)m-NR5-;
R5 is selected from: hydrogen and C1 -C6 alkyl, unsubstituted or substituted witha group selected from unsubstituted or substituted aryl, unsubstituted or substituted heterocyclyl, unsubstituted or substituted C3-C10 cycloalkyl, N(R8)2, CF3, NO2, (R8)O-,
(R9)S(O)m-, (R8)C(O)NH-, H2N-C(NH)-, (R8)C(O)-, (R8)OC(O)-, N3, CN (R9)OC(O)NR8-; and R8, R9, m and p are as originally defined.
22. A compound in accordance with claim 1 represented by the formula:
Figure imgf000055_0001
Figure imgf000056_0001
Figure imgf000057_0001
or a pharmaceutically acceptable salt thereof.
23. A pharmaceutical composition which comprises a compound in accordance with claim 1 in combination with a
pharmaceutically acceptable carrier.
24. A method of inhibiting famesyl-protein transferase in a mammalian patient in need of such treatment which comprises administering to said mammal a compound in accordance with claim 1.
25. A method of treating cancer in a mammalian patient in need of such treatment which comprises administering to said patient an anti-cancer effective amount of a compound in accordance with claim 1 .
26. A method of treating cancer in accordance with claim 23, wherein the cancer treated is selected from colorectal carcinoma, exocrine pancreatic carcinoma, myeloid leukemia and neurological tumors.
27. A method of treating neurofibromin benign proliferative disorder in a mammalian patient in need of such treatment which comprises administering to said patient an effective amount of a compound of Claim 1.
28. A method of treating blindness related to retinal vascularization in a mammalian patient in need of such treatment which comprises administering to said patient an amount of a compound of claim 1 which is effective for treating blindness related to retinal vascularization.
29. A method of treating hepatitis delta or a related viral infection in a mammalian patient in need of such treatment which comprises administering to said patient an anti-viral effective amount of a compound of claim 1.
30. A method of preventing restenosis in a mammalian patient in need of such treatment which comprises administering to said patient an amount of a compound of claim 1 which is effective for preventing restenosis.
31. A method of treating polycystic kidney disease in a mammalian patient in need of such treatment which comprises administering to said patient an amount of a compound of claim 1 which is effective for treating polycystic kidney disease..
32. A method of treating or preventing a disease selected from cancer, neurofibromin benign proliferative disorder, blindness related to retinal vascularization, infections from hepatitis delta and related viruses, restenosis and polycystic kidney disease, in a mammalian patient in need of such treatment which comprises administering to said patient an effective amount of a a compound of claim 1 .
PCT/US1997/005170 1996-04-03 1997-03-31 Inhibitors of farnesyl-protein transferase WO1997036583A1 (en)

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EP0891335A1 (en) * 1996-04-03 1999-01-20 Merck & Co., Inc. Inhibitors of farnesyl-protein transferase
JP2001526224A (en) * 1997-12-22 2001-12-18 シェーリング コーポレイション Combinations of benzocycloheptapyridine compounds and antitumor agents for treating proliferative diseases
US6358985B1 (en) 1998-07-02 2002-03-19 Merck & Co., Inc. Inhibitors of prenyl-protein transferase
US6410534B1 (en) 1998-07-02 2002-06-25 Merck & Co., Inc. Inhibitors of prenyl-protein transferase
US7973078B2 (en) 2006-08-10 2011-07-05 Astellas Pharma Inc. Sulfonamide compound or salt thereof

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* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP0880320A1 (en) * 1996-01-30 1998-12-02 Merck & Co., Inc. Inhibitors of farnesyl-protein transferase
EP0880320A4 (en) * 1996-01-30 1999-06-16 Merck & Co Inc Inhibitors of farnesyl-protein transferase
EP0891335A1 (en) * 1996-04-03 1999-01-20 Merck & Co., Inc. Inhibitors of farnesyl-protein transferase
EP0891335A4 (en) * 1996-04-03 2001-08-16 Merck & Co Inc Inhibitors of farnesyl-protein transferase
JP2001526224A (en) * 1997-12-22 2001-12-18 シェーリング コーポレイション Combinations of benzocycloheptapyridine compounds and antitumor agents for treating proliferative diseases
US6358985B1 (en) 1998-07-02 2002-03-19 Merck & Co., Inc. Inhibitors of prenyl-protein transferase
US6410534B1 (en) 1998-07-02 2002-06-25 Merck & Co., Inc. Inhibitors of prenyl-protein transferase
US7973078B2 (en) 2006-08-10 2011-07-05 Astellas Pharma Inc. Sulfonamide compound or salt thereof

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