WO2001067370A3 - Virtual gel profiling system - Google Patents

Virtual gel profiling system Download PDF

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Publication number
WO2001067370A3
WO2001067370A3 PCT/US2001/006971 US0106971W WO0167370A3 WO 2001067370 A3 WO2001067370 A3 WO 2001067370A3 US 0106971 W US0106971 W US 0106971W WO 0167370 A3 WO0167370 A3 WO 0167370A3
Authority
WO
WIPO (PCT)
Prior art keywords
signals
gel
profiles
samples
created
Prior art date
Application number
PCT/US2001/006971
Other languages
French (fr)
Other versions
WO2001067370A9 (en
WO2001067370A2 (en
Inventor
Juergen Haas
Original Assignee
Gene Logic Inc
Juergen Haas
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Gene Logic Inc, Juergen Haas filed Critical Gene Logic Inc
Priority to AU2001247275A priority Critical patent/AU2001247275A1/en
Publication of WO2001067370A2 publication Critical patent/WO2001067370A2/en
Publication of WO2001067370A3 publication Critical patent/WO2001067370A3/en
Publication of WO2001067370A9 publication Critical patent/WO2001067370A9/en

Links

Classifications

    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06F—ELECTRIC DIGITAL DATA PROCESSING
    • G06F18/00—Pattern recognition
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06F—ELECTRIC DIGITAL DATA PROCESSING
    • G06F2218/00—Aspects of pattern recognition specially adapted for signal processing

Landscapes

  • Engineering & Computer Science (AREA)
  • Theoretical Computer Science (AREA)
  • Data Mining & Analysis (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Computer Vision & Pattern Recognition (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Evolutionary Biology (AREA)
  • Evolutionary Computation (AREA)
  • Physics & Mathematics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Physics & Mathematics (AREA)
  • Artificial Intelligence (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Investigating Or Analysing Materials By Optical Means (AREA)

Abstract

A computerized system analyzing profiles of biological sample signals created on a gel. The system reads signals from the gel, refine and normalize the signals, quantify the intensity of the signals, organize such gel signal information with other information on the corresponding samples into profiles. The profiles created are stored in a suitable database. A pipeline links the database and the profiling system which allows efficient retrieval and update of the profile data. The computerized system is used to qualitatively and quantitatively characterize the biological states of input samples. Gel signals analyzed include signals of nucleic acids or proteins derived from a plurality of samples.
PCT/US2001/006971 2000-03-06 2001-03-06 Virtual gel profiling system WO2001067370A2 (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
AU2001247275A AU2001247275A1 (en) 2000-03-06 2001-03-06 Virtual gel profiling system

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US18703700P 2000-03-06 2000-03-06
US60/187,037 2000-03-06

Publications (3)

Publication Number Publication Date
WO2001067370A2 WO2001067370A2 (en) 2001-09-13
WO2001067370A3 true WO2001067370A3 (en) 2002-06-13
WO2001067370A9 WO2001067370A9 (en) 2003-01-09

Family

ID=22687356

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US2001/006971 WO2001067370A2 (en) 2000-03-06 2001-03-06 Virtual gel profiling system

Country Status (2)

Country Link
AU (1) AU2001247275A1 (en)
WO (1) WO2001067370A2 (en)

Families Citing this family (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
GB0027992D0 (en) * 2000-11-16 2001-01-03 Molecular Sensing Plc Apparatus and method for diagnostic assays
AU2002216326A1 (en) * 2002-01-08 2003-07-24 The Academy Of Applied Science Generating data-base compilation, storage, accessing, comparing and analyzing of scanned genetic spot pattern images
FR2842628B1 (en) * 2002-07-18 2004-09-24 Mauna Kea Technologies "METHOD OF PROCESSING AN IMAGE ACQUIRED BY MEANS OF A GUIDE CONSISTING OF A PLURALITY OF OPTICAL FIBERS"
CN107941655B (en) * 2017-11-10 2020-02-21 西安航天动力试验技术研究所 Formula and preparation method of gel simulation liquid of rocket engine hydrazine gel propellant

Citations (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4841443A (en) * 1985-10-30 1989-06-20 Hitachi, Ltd. Method of and apparatus for automatically reading 5 band arrayal pattern
US5121320A (en) * 1988-10-17 1992-06-09 Hitachi Software Engineering Co., Ltd. System for reading and displaying an edit-processed DNA pattern
WO1994020844A1 (en) * 1993-03-09 1994-09-15 Inopsia Bron & Co. Method for automatically correcting and matching digitized electrophoresis and western blots tests
US5666435A (en) * 1994-12-09 1997-09-09 Genomyx Corporation System for analysis of x-ray films of nucleotide sequences
WO1998059092A1 (en) * 1997-06-24 1998-12-30 Large Scale Biology Corporation Automated system for two-dimensional electrophoresis

Patent Citations (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4841443A (en) * 1985-10-30 1989-06-20 Hitachi, Ltd. Method of and apparatus for automatically reading 5 band arrayal pattern
US5121320A (en) * 1988-10-17 1992-06-09 Hitachi Software Engineering Co., Ltd. System for reading and displaying an edit-processed DNA pattern
WO1994020844A1 (en) * 1993-03-09 1994-09-15 Inopsia Bron & Co. Method for automatically correcting and matching digitized electrophoresis and western blots tests
US5666435A (en) * 1994-12-09 1997-09-09 Genomyx Corporation System for analysis of x-ray films of nucleotide sequences
WO1998059092A1 (en) * 1997-06-24 1998-12-30 Large Scale Biology Corporation Automated system for two-dimensional electrophoresis

Also Published As

Publication number Publication date
AU2001247275A1 (en) 2001-09-17
WO2001067370A9 (en) 2003-01-09
WO2001067370A2 (en) 2001-09-13

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