WO2003020968A3 - Method for analyzing nucleic acid sequences and gene expression - Google Patents
Method for analyzing nucleic acid sequences and gene expression Download PDFInfo
- Publication number
- WO2003020968A3 WO2003020968A3 PCT/EP2002/009614 EP0209614W WO03020968A3 WO 2003020968 A3 WO2003020968 A3 WO 2003020968A3 EP 0209614 W EP0209614 W EP 0209614W WO 03020968 A3 WO03020968 A3 WO 03020968A3
- Authority
- WO
- WIPO (PCT)
- Prior art keywords
- nucleic acid
- gene expression
- acid sequences
- analyzing nucleic
- acid molecules
- Prior art date
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6869—Methods for sequencing
- C12Q1/6874—Methods for sequencing involving nucleic acid arrays, e.g. sequencing by hybridisation
Abstract
Priority Applications (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
AU2002337030A AU2002337030A1 (en) | 2001-08-29 | 2002-08-28 | Method for analyzing nucleic acid sequences and gene expression |
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
DE10142256 | 2001-08-29 | ||
DE10142256.3 | 2001-08-29 |
Publications (2)
Publication Number | Publication Date |
---|---|
WO2003020968A2 WO2003020968A2 (en) | 2003-03-13 |
WO2003020968A3 true WO2003020968A3 (en) | 2003-12-31 |
Family
ID=7696956
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
PCT/EP2002/009614 WO2003020968A2 (en) | 2001-08-29 | 2002-08-28 | Method for analyzing nucleic acid sequences and gene expression |
Country Status (3)
Country | Link |
---|---|
AU (1) | AU2002337030A1 (en) |
DE (1) | DE10239504A1 (en) |
WO (1) | WO2003020968A2 (en) |
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US8691594B2 (en) | 1996-04-25 | 2014-04-08 | Bioarray Solutions, Ltd. | Method of making a microbead array with attached biomolecules |
US9012144B2 (en) | 2003-11-12 | 2015-04-21 | Fluidigm Corporation | Short cycle methods for sequencing polynucleotides |
US9115163B2 (en) | 2007-10-19 | 2015-08-25 | The Trustees Of Columbia University In The City Of New York | DNA sequence with non-fluorescent nucleotide reversible terminators and cleavable label modified nucleotide terminators |
US9121060B2 (en) | 2002-08-23 | 2015-09-01 | Illumina Cambridge Limited | Modified nucleotides |
US9121062B2 (en) | 2001-12-04 | 2015-09-01 | Illumina Cambridge Limited | Labelled nucleotides |
US9127314B2 (en) | 2002-08-23 | 2015-09-08 | Illumina Cambridge Limited | Labelled nucleotides |
US9133511B2 (en) | 2000-10-06 | 2015-09-15 | The Trustees Of Columbia University In The City Of New York | Massive parallel method for decoding DNA and RNA |
US9147037B2 (en) | 2004-08-02 | 2015-09-29 | Bioarray Solutions, Ltd. | Automated analysis of multiplexed probe-target interaction patterns: pattern matching and allele identification |
US9251583B2 (en) | 2002-11-15 | 2016-02-02 | Bioarray Solutions, Ltd. | Analysis, secure access to, and transmission of array images |
US9436088B2 (en) | 2001-06-21 | 2016-09-06 | Bioarray Solutions, Ltd. | Un-supported polymeric film with embedded microbeads |
US9469873B2 (en) | 2006-09-28 | 2016-10-18 | Illumina, Inc. | Compositions and methods for nucleotide sequencing |
US9528151B2 (en) | 2006-12-01 | 2016-12-27 | The Trustees Of Columbia University In The City Of New York | Four-color DNA sequencing by synthesis using cleavable fluorescent nucleotide reversible terminators |
US9540689B2 (en) | 1998-05-01 | 2017-01-10 | Life Technologies Corporation | Method of determining the nucleotide sequence of oligonucleotides and DNA molecules |
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US11008359B2 (en) | 2002-08-23 | 2021-05-18 | Illumina Cambridge Limited | Labelled nucleotides |
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US20050260609A1 (en) * | 2004-05-24 | 2005-11-24 | Lapidus Stanley N | Methods and devices for sequencing nucleic acids |
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US10174368B2 (en) | 2009-09-10 | 2019-01-08 | Centrillion Technology Holdings Corporation | Methods and systems for sequencing long nucleic acids |
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US20120252682A1 (en) | 2011-04-01 | 2012-10-04 | Maples Corporate Services Limited | Methods and systems for sequencing nucleic acids |
WO2013070634A1 (en) | 2011-11-07 | 2013-05-16 | Ingenuity Systems, Inc. | Methods and systems for identification of causal genomic variants |
EP2882868B1 (en) | 2012-08-08 | 2019-07-31 | H. Hoffnabb-La Roche Ag | Increasing dynamic range for identifying multiple epitopes in cells |
US9411930B2 (en) | 2013-02-01 | 2016-08-09 | The Regents Of The University Of California | Methods for genome assembly and haplotype phasing |
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WO2014144883A1 (en) | 2013-03-15 | 2014-09-18 | The Trustees Of Columbia University In The City Of New York | Raman cluster tagged molecules for biological imaging |
KR102230831B1 (en) | 2013-03-15 | 2021-03-22 | 일루미나 케임브리지 리미티드 | Modified nucleosides or nucleotides |
BR112016010095A2 (en) | 2013-11-07 | 2017-09-12 | Univ Leland Stanford Junior | free cell nucleic acids for human microbiome analysis and components thereof. |
US11091758B2 (en) | 2013-12-11 | 2021-08-17 | The Regents Of The University Of California | Methods for labeling DNAa fragments to reconstruct physical linkage and phase |
US10526641B2 (en) | 2014-08-01 | 2020-01-07 | Dovetail Genomics, Llc | Tagging nucleic acids for sequence assembly |
JP6777966B2 (en) | 2015-02-17 | 2020-10-28 | ダブテイル ゲノミクス エルエルシー | Nucleic acid sequence assembly |
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JP7300831B2 (en) | 2015-10-19 | 2023-06-30 | ダブテイル ゲノミクス エルエルシー | Methods for Genome Assembly, Haplotype Phasing, and Target-Independent Nucleic Acid Detection |
JP7441003B2 (en) | 2016-02-23 | 2024-02-29 | ダブテイル ゲノミクス エルエルシー | Generation of phased read sets and haplotype phasing for genome assembly |
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AU2018256358A1 (en) | 2017-04-18 | 2019-11-07 | Dovetail Genomics, Llc | Nucleic acid characteristics as guides for sequence assembly |
CA3068273A1 (en) | 2017-06-21 | 2018-12-27 | Bluedot Llc | Systems and methods for identification of nucleic acids in a sample |
WO2019060716A1 (en) | 2017-09-25 | 2019-03-28 | Freenome Holdings, Inc. | Methods and systems for sample extraction |
AU2019214956A1 (en) | 2018-01-31 | 2020-08-27 | Dovetail Genomics, Llc | Sample prep for DNA linkage recovery |
US11166996B2 (en) | 2018-12-12 | 2021-11-09 | Flagship Pioneering Innovations V, Inc. | Anellovirus compositions and methods of use |
CN110951852B (en) * | 2019-11-25 | 2022-11-25 | 齐鲁工业大学 | Single-base continuous extension flow type target sequencing method |
Citations (7)
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WO1993005183A1 (en) * | 1991-09-09 | 1993-03-18 | Baylor College Of Medicine | Method and device for rapid dna or rna sequencing determination by a base addition sequencing scheme |
WO1993021340A1 (en) * | 1992-04-22 | 1993-10-28 | Medical Research Council | Dna sequencing method |
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WO2000006770A1 (en) * | 1998-07-30 | 2000-02-10 | Solexa Ltd. | Arrayed biomolecules and their use in sequencing |
WO2002061127A2 (en) * | 2001-01-30 | 2002-08-08 | Solexa Ltd. | Arrayed polynucleotides and their use in genome analysis |
WO2002088382A2 (en) * | 2001-04-27 | 2002-11-07 | Genovoxx Gmbh | Method for analysing nucleic acid chains |
-
2002
- 2002-08-28 WO PCT/EP2002/009614 patent/WO2003020968A2/en not_active Application Discontinuation
- 2002-08-28 AU AU2002337030A patent/AU2002337030A1/en not_active Abandoned
- 2002-08-28 DE DE10239504A patent/DE10239504A1/en not_active Ceased
Patent Citations (8)
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US5547839A (en) * | 1989-06-07 | 1996-08-20 | Affymax Technologies N.V. | Sequencing of surface immobilized polymers utilizing microflourescence detection |
US5302509A (en) * | 1989-08-14 | 1994-04-12 | Beckman Instruments, Inc. | Method for sequencing polynucleotides |
WO1993005183A1 (en) * | 1991-09-09 | 1993-03-18 | Baylor College Of Medicine | Method and device for rapid dna or rna sequencing determination by a base addition sequencing scheme |
WO1993021340A1 (en) * | 1992-04-22 | 1993-10-28 | Medical Research Council | Dna sequencing method |
WO2000006770A1 (en) * | 1998-07-30 | 2000-02-10 | Solexa Ltd. | Arrayed biomolecules and their use in sequencing |
WO2002061127A2 (en) * | 2001-01-30 | 2002-08-08 | Solexa Ltd. | Arrayed polynucleotides and their use in genome analysis |
WO2002061126A2 (en) * | 2001-01-30 | 2002-08-08 | Solexa Ltd. | The preparation of polynucleotide arrays |
WO2002088382A2 (en) * | 2001-04-27 | 2002-11-07 | Genovoxx Gmbh | Method for analysing nucleic acid chains |
Non-Patent Citations (1)
Title |
---|
TONISSON N ET AL: "UNRAVELLING GENETIC DATA BY ARRAYED PRIMER EXTENSION", CLINICAL CHEMISTRY AND LABORATORY MEDICINE, WALTER DE GRUYTER UND CO, DE, vol. 38, no. 2, 2000, pages 165 - 170, XP001023733, ISSN: 1434-6621 * |
Cited By (19)
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US8691594B2 (en) | 1996-04-25 | 2014-04-08 | Bioarray Solutions, Ltd. | Method of making a microbead array with attached biomolecules |
US9400259B2 (en) | 1996-04-25 | 2016-07-26 | Bioarray Solutions, Ltd. | Method of making a microbead array with attached biomolecules |
US9540689B2 (en) | 1998-05-01 | 2017-01-10 | Life Technologies Corporation | Method of determining the nucleotide sequence of oligonucleotides and DNA molecules |
US9133511B2 (en) | 2000-10-06 | 2015-09-15 | The Trustees Of Columbia University In The City Of New York | Massive parallel method for decoding DNA and RNA |
US9436088B2 (en) | 2001-06-21 | 2016-09-06 | Bioarray Solutions, Ltd. | Un-supported polymeric film with embedded microbeads |
US9388463B2 (en) | 2001-12-04 | 2016-07-12 | Illumina Cambridge Limited | Labelled nucleotides |
US9410200B2 (en) | 2001-12-04 | 2016-08-09 | Illumina Cambridge Limited | Labelled nucleotides |
US9121062B2 (en) | 2001-12-04 | 2015-09-01 | Illumina Cambridge Limited | Labelled nucleotides |
US9121060B2 (en) | 2002-08-23 | 2015-09-01 | Illumina Cambridge Limited | Modified nucleotides |
US9388464B2 (en) | 2002-08-23 | 2016-07-12 | Illumina Cambridge Limited | Modified nucleotides |
US9127314B2 (en) | 2002-08-23 | 2015-09-08 | Illumina Cambridge Limited | Labelled nucleotides |
US9410199B2 (en) | 2002-08-23 | 2016-08-09 | Illumina Cambridge Limited | Labelled nucleotides |
US9251583B2 (en) | 2002-11-15 | 2016-02-02 | Bioarray Solutions, Ltd. | Analysis, secure access to, and transmission of array images |
US8691754B2 (en) | 2003-09-22 | 2014-04-08 | Bioarray Solutions, Ltd. | Microparticles with enhanced covalent binding capacity and their uses |
US9012144B2 (en) | 2003-11-12 | 2015-04-21 | Fluidigm Corporation | Short cycle methods for sequencing polynucleotides |
US9147037B2 (en) | 2004-08-02 | 2015-09-29 | Bioarray Solutions, Ltd. | Automated analysis of multiplexed probe-target interaction patterns: pattern matching and allele identification |
US9469873B2 (en) | 2006-09-28 | 2016-10-18 | Illumina, Inc. | Compositions and methods for nucleotide sequencing |
US9528151B2 (en) | 2006-12-01 | 2016-12-27 | The Trustees Of Columbia University In The City Of New York | Four-color DNA sequencing by synthesis using cleavable fluorescent nucleotide reversible terminators |
US9115163B2 (en) | 2007-10-19 | 2015-08-25 | The Trustees Of Columbia University In The City Of New York | DNA sequence with non-fluorescent nucleotide reversible terminators and cleavable label modified nucleotide terminators |
Also Published As
Publication number | Publication date |
---|---|
AU2002337030A1 (en) | 2003-03-18 |
WO2003020968A2 (en) | 2003-03-13 |
DE10239504A1 (en) | 2003-04-24 |
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