WO2005011947A3 - Image processing method and system for microfluidic devices - Google Patents

Image processing method and system for microfluidic devices Download PDF

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Publication number
WO2005011947A3
WO2005011947A3 PCT/US2004/024591 US2004024591W WO2005011947A3 WO 2005011947 A3 WO2005011947 A3 WO 2005011947A3 US 2004024591 W US2004024591 W US 2004024591W WO 2005011947 A3 WO2005011947 A3 WO 2005011947A3
Authority
WO
WIPO (PCT)
Prior art keywords
image
image processing
processing method
state
method includes
Prior art date
Application number
PCT/US2004/024591
Other languages
French (fr)
Other versions
WO2005011947A2 (en
WO2005011947A9 (en
Inventor
Colin Jon Taylor
Gang Sun
Simant Dube
Original Assignee
Fluidigm Corp
Colin Jon Taylor
Gang Sun
Simant Dube
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Fluidigm Corp, Colin Jon Taylor, Gang Sun, Simant Dube filed Critical Fluidigm Corp
Priority to AU2004261655A priority Critical patent/AU2004261655A1/en
Priority to EP04757388A priority patent/EP1667829A4/en
Priority to CA002532530A priority patent/CA2532530A1/en
Priority to JP2006522086A priority patent/JP2007506943A/en
Publication of WO2005011947A2 publication Critical patent/WO2005011947A2/en
Publication of WO2005011947A9 publication Critical patent/WO2005011947A9/en
Publication of WO2005011947A3 publication Critical patent/WO2005011947A3/en

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Classifications

    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06TIMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T7/00Image analysis
    • G06T7/0002Inspection of images, e.g. flaw detection
    • G06T7/0004Industrial image inspection
    • G06T7/0008Industrial image inspection checking presence/absence
    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06FELECTRIC DIGITAL DATA PROCESSING
    • G06F18/00Pattern recognition
    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06FELECTRIC DIGITAL DATA PROCESSING
    • G06F18/00Pattern recognition
    • G06F18/20Analysing
    • G06F18/21Design or setup of recognition systems or techniques; Extraction of features in feature space; Blind source separation
    • G06F18/213Feature extraction, e.g. by transforming the feature space; Summarisation; Mappings, e.g. subspace methods
    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06TIMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T7/00Image analysis
    • G06T7/0002Inspection of images, e.g. flaw detection
    • G06T7/0012Biomedical image inspection
    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06TIMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T7/00Image analysis
    • G06T7/20Analysis of motion
    • G06T7/254Analysis of motion involving subtraction of images
    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06TIMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T7/00Image analysis
    • G06T7/30Determination of transform parameters for the alignment of images, i.e. image registration
    • G06T7/33Determination of transform parameters for the alignment of images, i.e. image registration using feature-based methods
    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06VIMAGE OR VIDEO RECOGNITION OR UNDERSTANDING
    • G06V10/00Arrangements for image or video recognition or understanding
    • G06V10/70Arrangements for image or video recognition or understanding using pattern recognition or machine learning
    • G06V10/77Processing image or video features in feature spaces; using data integration or data reduction, e.g. principal component analysis [PCA] or independent component analysis [ICA] or self-organising maps [SOM]; Blind source separation
    • G06V10/7715Feature extraction, e.g. by transforming the feature space, e.g. multi-dimensional scaling [MDS]; Mappings, e.g. subspace methods
    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06VIMAGE OR VIDEO RECOGNITION OR UNDERSTANDING
    • G06V20/00Scenes; Scene-specific elements
    • G06V20/60Type of objects
    • G06V20/69Microscopic objects, e.g. biological cells or cellular parts
    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06VIMAGE OR VIDEO RECOGNITION OR UNDERSTANDING
    • G06V20/00Scenes; Scene-specific elements
    • G06V20/60Type of objects
    • G06V20/69Microscopic objects, e.g. biological cells or cellular parts
    • G06V20/693Acquisition
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01LCHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L3/00Containers or dishes for laboratory use, e.g. laboratory glassware; Droppers
    • B01L3/50Containers for the purpose of retaining a material to be analysed, e.g. test tubes
    • B01L3/502Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures
    • B01L3/5027Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures by integrated microfluidic structures, i.e. dimensions of channels and chambers are such that surface tension forces are important, e.g. lab-on-a-chip
    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06TIMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T2207/00Indexing scheme for image analysis or image enhancement
    • G06T2207/30Subject of image; Context of image processing
    • G06T2207/30004Biomedical image processing

Abstract

A method for processing an image of a micro fluidic device. The method includes receiving a first image of a micro fluidic device. The first image corresponds to a first state. Additionally, the method includes receiving a second image of the micro fluidic device. The second image corresponds to a second state. Moreover, the method includes transforming the first image and the second image into a third coordinate space (520). Also, the method includes obtaining a third image based on at least information associated (540) with the transformed first image and the transformed second image, and processing the third image to obtain information (550) associated with the first state and the second state.
PCT/US2004/024591 2003-07-28 2004-07-28 Image processing method and system for microfluidic devices WO2005011947A2 (en)

Priority Applications (4)

Application Number Priority Date Filing Date Title
AU2004261655A AU2004261655A1 (en) 2003-07-28 2004-07-28 Image processing method and system for microfluidic devices
EP04757388A EP1667829A4 (en) 2003-07-28 2004-07-28 Image processing method and system for microfluidic devices
CA002532530A CA2532530A1 (en) 2003-07-28 2004-07-28 Image processing method and system for microfluidic devices
JP2006522086A JP2007506943A (en) 2003-07-28 2004-07-28 Image processing method and system for microfluidic devices

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US49071203P 2003-07-28 2003-07-28
US60/490,712 2003-07-28

Publications (3)

Publication Number Publication Date
WO2005011947A2 WO2005011947A2 (en) 2005-02-10
WO2005011947A9 WO2005011947A9 (en) 2006-10-26
WO2005011947A3 true WO2005011947A3 (en) 2007-12-13

Family

ID=34115428

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US2004/024591 WO2005011947A2 (en) 2003-07-28 2004-07-28 Image processing method and system for microfluidic devices

Country Status (7)

Country Link
US (2) US7583853B2 (en)
EP (1) EP1667829A4 (en)
JP (1) JP2007506943A (en)
AU (1) AU2004261655A1 (en)
CA (1) CA2532530A1 (en)
SG (1) SG145697A1 (en)
WO (1) WO2005011947A2 (en)

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